RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 OLFML1Q6UWY5 402 aa8.63□□□□□ -1.03
NEK3-209ENST00000618856 ARCQ7LC44 396 aa8.63□□□□□ -1.03
NEK3-209ENST00000618856 IRF2BP2Q7Z5L9 587 aa8.63□□□□□ -1.03
NEK3-209ENST00000618856 LUZP1Q86V48 1076 aa8.63□□□□□ -1.03
NEK3-209ENST00000618856 ZDHHC17Q8IUH5 632 aa8.63□□□□□ -1.03
NEK3-209ENST00000618856 C1orf210Q8IVY1 113 aa8.63□□□□□ -1.03
NEK3-209ENST00000618856 CPXM2Q8N436 756 aa8.63□□□□□ -1.03
NEK3-209ENST00000618856 TTC8Q8TAM2 541 aa8.63□□□□□ -1.03
NEK3-209ENST00000618856 PLD4Q96BZ4 506 aa8.63□□□□□ -1.03
NEK3-209ENST00000618856 SLC39A13Q96H72 371 aa8.63□□□□□ -1.03
NEK3-209ENST00000618856 PIWIL1Q96J94 861 aaKnown RBP8.63□□□□□ -1.03
NEK3-209ENST00000618856 PPP1R13BQ96KQ4 1090 aa8.63□□□□□ -1.03
NEK3-209ENST00000618856 IRX2Q9BZI1 471 aaPredicted RBP8.63□□□□□ -1.03
NEK3-209ENST00000618856 EDEM3Q9BZQ6 932 aa8.63□□□□□ -1.03
NEK3-209ENST00000618856 DCLK3Q9C098 648 aa8.63□□□□□ -1.03
NEK3-209ENST00000618856 LMAN1LQ9HAT1 526 aa8.63□□□□□ -1.03
NEK3-209ENST00000618856 SPHK2Q9NRA0 654 aa8.63□□□□□ -1.03
NEK3-209ENST00000618856 MARCH2Q9P0N8 246 aa8.63□□□□□ -1.03
NEK3-209ENST00000618856 TJP2Q9UDY2 1190 aa8.63□□□□□ -1.03
NEK3-209ENST00000618856 FBXO10Q9UK96 956 aa8.63□□□□□ -1.03
NEK3-209ENST00000618856 AGO1Q9UL18 857 aaKnown RBP8.63□□□□□ -1.03
NEK3-209ENST00000618856 SH3BP1Q9Y3L3 701 aa8.63□□□□□ -1.03
NEK3-209ENST00000618856 KIAA1549LQ6ZVL6 1849 aa8.63□□□□□ -1.03
NEK3-209ENST00000618856 FRYLO94915 3013 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 K7EQS6 105 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 PIK3R2O00459 728 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 ADH1CP00326 375 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 PENKP01210 267 aaPredicted RBP8.62□□□□□ -1.03
NEK3-209ENST00000618856 ERBB2P04626 1255 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 ADH5P11766 374 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 UNGP13051 313 aaPredicted RBP8.62□□□□□ -1.03
NEK3-209ENST00000618856 HOXA6P31267 233 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 KRT9P35527 623 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 SCNN1AP37088 669 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 PTPN5P54829 565 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 GSCP56915 257 aaPredicted RBP8.62□□□□□ -1.03
NEK3-209ENST00000618856 YWHAZP63104 245 aaKnown RBP8.62□□□□□ -1.03
NEK3-209ENST00000618856 NOMO3P69849 1222 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 FMO1Q01740 532 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 GAD2Q05329 585 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 MTAPQ13126 283 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 LRRC32Q14392 662 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 PON2Q15165 354 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 TAF5Q15542 800 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 FBXO43Q4G163 708 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 LY6G5CQ5SRR4 150 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 FYB2Q5VWT5 728 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 SYPL2Q5VXT5 272 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 LRSAM1Q6UWE0 723 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 SLC26A9Q7LBE3 791 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 BNIPLQ7Z465 357 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 TMEM25Q86YD3 366 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 MIB1Q86YT6 1006 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 FMNL3Q8IVF7 1028 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 SPEM1Q8N4L4 309 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 TMEM35BQ8NCS4 154 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 C1orf131Q8NDD1 294 aaKnown RBP8.62□□□□□ -1.03
NEK3-209ENST00000618856 NEK11Q8NG66 645 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 SLC20A1Q8WUM9 679 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 EDEM1Q92611 657 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 CD101Q93033 1021 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 NT5C3BQ969T7 300 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 P2RY13Q9BPV8 354 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 TRIM62Q9BVG3 475 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 NACA2Q9H009 215 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 MIS12Q9H081 205 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 IRF2BPLQ9H1B7 796 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 POPDC2Q9HBU9 364 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 NLRC4Q9NPP4 1024 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 SFMBT1Q9UHJ3 866 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 RASAL2Q9UJF2 1139 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 FBXO4Q9UKT5 387 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 STRIP2Q9ULQ0 834 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 NDRG2Q9UN36 371 aaKnown RBP8.62□□□□□ -1.03
NEK3-209ENST00000618856 NAALADL1Q9UQQ1 740 aa8.62□□□□□ -1.03
NEK3-209ENST00000618856 SLC12A8A0AV02 714 aa8.61□□□□□ -1.03
NEK3-209ENST00000618856 PROB1E7EW31 1015 aa8.61□□□□□ -1.03
NEK3-209ENST00000618856 STK25O00506 426 aa8.61□□□□□ -1.03
NEK3-209ENST00000618856 SCAMP3O14828 347 aaKnown RBP8.61□□□□□ -1.03
NEK3-209ENST00000618856 CACNG3O60359 315 aa8.61□□□□□ -1.03
NEK3-209ENST00000618856 HSF2BPO75031 334 aa8.61□□□□□ -1.03
NEK3-209ENST00000618856 GFPT2O94808 682 aa8.61□□□□□ -1.03
NEK3-209ENST00000618856 EGFP01133 1207 aa8.61□□□□□ -1.03
NEK3-209ENST00000618856 MMEP08473 750 aa8.61□□□□□ -1.03
NEK3-209ENST00000618856 CISD3P0C7P0 127 aa8.61□□□□□ -1.03
NEK3-209ENST00000618856 MMP8P22894 467 aa8.61□□□□□ -1.03
NEK3-209ENST00000618856 CORO1AP31146 461 aaKnown RBP8.61□□□□□ -1.03
NEK3-209ENST00000618856 CHKAP35790 457 aa8.61□□□□□ -1.03
NEK3-209ENST00000618856 SLC6A11P48066 632 aa8.61□□□□□ -1.03
NEK3-209ENST00000618856 SNX16P57768 344 aa8.61□□□□□ -1.03
NEK3-209ENST00000618856 ZNF445P59923 1031 aa8.61□□□□□ -1.03
NEK3-209ENST00000618856 FANCCQ00597 558 aa8.61□□□□□ -1.03
NEK3-209ENST00000618856 SLC6A3Q01959 620 aa8.61□□□□□ -1.03
NEK3-209ENST00000618856 NHLH1Q02575 133 aa8.61□□□□□ -1.03
NEK3-209ENST00000618856 MESP2Q0VG99 397 aa8.61□□□□□ -1.03
NEK3-209ENST00000618856 GRSF1Q12849 480 aaKnown RBP eCLIP8.61□□□□□ -1.03
NEK3-209ENST00000618856 PTP4A2Q12974 167 aa8.61□□□□□ -1.03
NEK3-209ENST00000618856 ANGPT1Q15389 498 aa8.61□□□□□ -1.03
NEK3-209ENST00000618856 FILIP1LQ4L180 1135 aa8.61□□□□□ -1.03
NEK3-209ENST00000618856 EFHC1Q5JVL4 640 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms