RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 ULBP1Q9BZM6 244 aa12.87□□□□□ -0.35
CIITA-212ENST00000618207 MTMR10Q9NXD2 777 aa12.87□□□□□ -0.35
CIITA-212ENST00000618207 MAGED2Q9UNF1 606 aaPredicted RBP12.87□□□□□ -0.35
CIITA-212ENST00000618207 TRPV2Q9Y5S1 764 aa12.87□□□□□ -0.35
CIITA-212ENST00000618207 LAMA2P24043 3122 aaKnown RBP12.87□□□□□ -0.35
CIITA-212ENST00000618207 ARL5CA6NH57 179 aa12.87□□□□□ -0.35
CIITA-212ENST00000618207 FAM47DPA6NHR8 397 aa12.87□□□□□ -0.35
CIITA-212ENST00000618207 CCND3P30281 292 aaPredicted RBP12.87□□□□□ -0.35
CIITA-212ENST00000618207 FOXN2P32314 431 aa12.87□□□□□ -0.35
CIITA-212ENST00000618207 PHBP35232 272 aa12.87□□□□□ -0.35
CIITA-212ENST00000618207 MSH2P43246 934 aa12.87□□□□□ -0.35
CIITA-212ENST00000618207 YWHAZP63104 245 aaKnown RBP12.87□□□□□ -0.35
CIITA-212ENST00000618207 AGMOQ6ZNB7 445 aa12.87□□□□□ -0.35
CIITA-212ENST00000618207 ARHGEF18Q6ZSZ5 1173 aa12.87□□□□□ -0.35
CIITA-212ENST00000618207 ANKS4BQ8N8V4 417 aa12.87□□□□□ -0.35
CIITA-212ENST00000618207 PCED1BQ96HM7 432 aa12.87□□□□□ -0.35
CIITA-212ENST00000618207 SPC25Q9HBM1 224 aa12.87□□□□□ -0.35
CIITA-212ENST00000618207 SLCO1B3Q9NPD5 702 aa12.87□□□□□ -0.35
CIITA-212ENST00000618207 PSMC3IPQ9P2W1 217 aaPredicted RBP12.87□□□□□ -0.35
CIITA-212ENST00000618207 MKI67P46013 3256 aaKnown RBP12.87□□□□□ -0.35
CIITA-212ENST00000618207 SRRM3A6NNA2 597 aaPredicted RBP12.86□□□□□ -0.35
CIITA-212ENST00000618207 YJEFN3A6XGL0 299 aa12.86□□□□□ -0.35
CIITA-212ENST00000618207 E7ENQ6 273 aa12.86□□□□□ -0.35
CIITA-212ENST00000618207 MDM4O15151 490 aa12.86□□□□□ -0.35
CIITA-212ENST00000618207 ARL4AP40617 200 aa12.86□□□□□ -0.35
CIITA-212ENST00000618207 MATKP42679 507 aa12.86□□□□□ -0.35
CIITA-212ENST00000618207 CRADDP78560 199 aa12.86□□□□□ -0.35
CIITA-212ENST00000618207 SLC1A5Q15758 541 aa12.86□□□□□ -0.35
CIITA-212ENST00000618207 XKR4Q5GH76 650 aa12.86□□□□□ -0.35
CIITA-212ENST00000618207 DENND5BQ6ZUT9 1274 aa12.86□□□□□ -0.35
CIITA-212ENST00000618207 PRPF39Q86UA1 669 aaKnown RBP12.86□□□□□ -0.35
CIITA-212ENST00000618207 PACS2Q86VP3 889 aa12.86□□□□□ -0.35
CIITA-212ENST00000618207 STK32AQ8WU08 396 aa12.86□□□□□ -0.35
CIITA-212ENST00000618207 PPM1EQ8WY54 764 aa12.86□□□□□ -0.35
CIITA-212ENST00000618207 ABCF3Q9NUQ8 709 aa12.86□□□□□ -0.35
CIITA-212ENST00000618207 PADI3Q9ULW8 664 aa12.86□□□□□ -0.35
CIITA-212ENST00000618207 NOD1Q9Y239 953 aa12.86□□□□□ -0.35
CIITA-212ENST00000618207 TCRBV9S1A1TA0A576 114 aa12.86□□□□□ -0.35
CIITA-212ENST00000618207 XPO1O14980 1071 aaKnown RBP12.86□□□□□ -0.35
CIITA-212ENST00000618207 MGEA5O60502 916 aa12.86□□□□□ -0.35
CIITA-212ENST00000618207 FAM200BP0CF97 657 aa12.86□□□□□ -0.35
CIITA-212ENST00000618207 MRPS5P82675 430 aaKnown RBP12.86□□□□□ -0.35
CIITA-212ENST00000618207 AP1B1Q10567 949 aa12.86□□□□□ -0.35
CIITA-212ENST00000618207 KCNA10Q16322 511 aa12.86□□□□□ -0.35
CIITA-212ENST00000618207 EFHC1Q5JVL4 640 aa12.86□□□□□ -0.35
CIITA-212ENST00000618207 HEATR6Q6AI08 1181 aaKnown RBP12.86□□□□□ -0.35
CIITA-212ENST00000618207 SLC9A4Q6AI14 798 aa12.86□□□□□ -0.35
CIITA-212ENST00000618207 RSPH3Q86UC2 560 aa12.86□□□□□ -0.35
CIITA-212ENST00000618207 ZDHHC17Q8IUH5 632 aa12.86□□□□□ -0.35
CIITA-212ENST00000618207 CKAP2Q8WWK9 683 aa12.86□□□□□ -0.35
CIITA-212ENST00000618207 SYT15Q9BQS2 421 aa12.86□□□□□ -0.35
CIITA-212ENST00000618207 ZNF670Q9BS34 389 aa12.86□□□□□ -0.35
CIITA-212ENST00000618207 FRMD8P1Q9BZ68 369 aaPredicted RBP12.86□□□□□ -0.35
CIITA-212ENST00000618207 NSRP1Q9H0G5 558 aaKnown RBP12.86□□□□□ -0.35
CIITA-212ENST00000618207 XPNPEP3Q9NQH7 507 aa12.86□□□□□ -0.35
CIITA-212ENST00000618207 TRMT13Q9NUP7 481 aaKnown RBP12.86□□□□□ -0.35
CIITA-212ENST00000618207 DTLQ9NZJ0 730 aa12.86□□□□□ -0.35
CIITA-212ENST00000618207 PAK5Q9P286 719 aa12.86□□□□□ -0.35
CIITA-212ENST00000618207 IKBKGQ9Y6K9 419 aa12.86□□□□□ -0.35
CIITA-212ENST00000618207 AMHP03971 560 aa12.85□□□□□ -0.35
CIITA-212ENST00000618207 NCAM1P13591 858 aa12.85□□□□□ -0.35
CIITA-212ENST00000618207 TGM2P21980 687 aa12.85□□□□□ -0.35
CIITA-212ENST00000618207 PTPN9P43378 593 aa12.85□□□□□ -0.35
CIITA-212ENST00000618207 ACADSBP45954 432 aa12.85□□□□□ -0.35
CIITA-212ENST00000618207 DEUP1Q05D60 604 aa12.85□□□□□ -0.35
CIITA-212ENST00000618207 KCNJ11Q14654 390 aa12.85□□□□□ -0.35
CIITA-212ENST00000618207 DPYSL2Q16555 572 aa12.85□□□□□ -0.35
CIITA-212ENST00000618207 TIGD5Q53EQ6 642 aa12.85□□□□□ -0.35
CIITA-212ENST00000618207 MFSD14CQ5VZR4 134 aa12.85□□□□□ -0.35
CIITA-212ENST00000618207 SPATS2Q86XZ4 545 aaKnown RBP12.85□□□□□ -0.35
CIITA-212ENST00000618207 MPP5Q8N3R9 675 aa12.85□□□□□ -0.35
CIITA-212ENST00000618207 PPM1NQ8N819 430 aa12.85□□□□□ -0.35
CIITA-212ENST00000618207 STKLD1Q8NE28 680 aa12.85□□□□□ -0.35
CIITA-212ENST00000618207 TEKT4Q8WW24 435 aa12.85□□□□□ -0.35
CIITA-212ENST00000618207 HSFY1Q96LI6 401 aa12.85□□□□□ -0.35
CIITA-212ENST00000618207 PGLYRP2Q96PD5 576 aa12.85□□□□□ -0.35
CIITA-212ENST00000618207 HNRNPABQ99729 332 aaKnown RBP12.85□□□□□ -0.35
CIITA-212ENST00000618207 KLC2Q9H0B6 622 aa12.85□□□□□ -0.35
CIITA-212ENST00000618207 PIGVQ9NUD9 493 aa12.85□□□□□ -0.35
CIITA-212ENST00000618207 GRID1Q9ULK0 1009 aa12.85□□□□□ -0.35
CIITA-212ENST00000618207 SNX10Q9Y5X0 201 aa12.85□□□□□ -0.35
CIITA-212ENST00000618207 TRPM7Q96QT4 1865 aa12.85□□□□□ -0.35
CIITA-212ENST00000618207 MFSD11O43934 449 aa12.85□□□□□ -0.35
CIITA-212ENST00000618207 SLC10A3P09131 477 aa12.85□□□□□ -0.35
CIITA-212ENST00000618207 CYBAP13498 195 aa12.85□□□□□ -0.35
CIITA-212ENST00000618207 CACNB2Q08289 660 aaPredicted RBP12.85□□□□□ -0.35
CIITA-212ENST00000618207 SEPT7Q16181 437 aaKnown RBP12.85□□□□□ -0.35
CIITA-212ENST00000618207 NCBP2-AS2Q69YL0 99 aa12.85□□□□□ -0.35
CIITA-212ENST00000618207 TOP6BLQ8N6T0 577 aa12.85□□□□□ -0.35
CIITA-212ENST00000618207 FAM72CH0Y354 149 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 SNX3O60493 162 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 ATP2A2P16615 1042 aaKnown RBP12.84□□□□□ -0.35
CIITA-212ENST00000618207 WARSP23381 471 aaKnown RBP12.84□□□□□ -0.35
CIITA-212ENST00000618207 IL9RQ01113 521 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 OLIG2Q13516 323 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 SLC25A52Q3SY17 297 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 EFHC2Q5JST6 749 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 FAM72AQ5TYM5 149 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 FAM72DQ6L9T8 149 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 CASC4Q6P4E1 433 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms