RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 RAD51BO15315 384 aa11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 NUDT14O95848 222 aa11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 HSMCR30P0CW71 290 aa11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 HALP42357 657 aa11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 ADRM1Q16186 407 aa11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 ATG16L2Q8NAA4 619 aa11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 TDRD5Q8NAT2 981 aaKnown RBP11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 ZNF521Q96K83 1311 aa11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 CCT8L1PA6NM43 557 aa11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 ATP6V1B2P21281 511 aa11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 TRAF2Q12933 501 aa11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 MKRN4PQ13434 485 aaPredicted RBP11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 ACOX1Q15067 660 aa11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 RNFT2Q96EX2 444 aa11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 MAGEB18Q96M61 343 aa11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 SLITRK2Q9H156 845 aa11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 GANQ9H2C0 597 aa11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 RERGLQ9H628 205 aa11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 CPSF4O95639 269 aaKnown RBP11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 MPOP05164 745 aa11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 CYP2A6P11509 494 aaPredicted RBP11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 POU1F1P28069 291 aa11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 CHORDC1Q9UHD1 332 aaPredicted RBP11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 MYH2Q9UKX2 1941 aa11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 CNTNAP5Q8WYK1 1306 aa11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 LRRC14BA6NHZ5 514 aa11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 PRMT3O60678 531 aa11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 CAPN1P07384 714 aa11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 MYL4P12829 197 aa11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 HNMTP50135 292 aa11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 MRPS35P82673 323 aaKnown RBP11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 TOMM20Q15388 145 aa11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 SRLQ86TD4 932 aa11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 ARID3BQ8IVW6 561 aaPredicted RBP11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 ANKS1AQ92625 1134 aa11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 FAM111AQ96PZ2 611 aa11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 HDHD2Q9H0R4 259 aa11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 CYP3A43Q9HB55 503 aa11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 AMHP03971 560 aa11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 RAG1P15918 1043 aa11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 MYL12AP19105 171 aa11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 TFE3P19532 575 aaPredicted RBP11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 TKTP29401 623 aaKnown RBP11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 NFYCQ13952 458 aa11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 KLHL24Q6TFL4 600 aa11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 TMEM237Q96Q45 408 aa11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 CAAP1Q9H8G2 361 aa11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 ACTR8Q9H981 624 aa11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 CCDC88AQ3V6T2 1871 aa11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 DIP2AQ14689 1571 aa11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 TRIM66O15016 1216 aa11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 ITGAXP20702 1163 aa11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 NFIL3Q16649 462 aa11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 TMC7Q7Z402 723 aa11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 APLFQ8IW19 511 aaPredicted RBP11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 DENND6AQ8IWF6 608 aa11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 EID3Q8N140 333 aa11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 ZNF655Q8N720 491 aaPredicted RBP11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 ZNF557Q8N988 423 aaPredicted RBP11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 INTS13Q9NVM9 706 aa11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 PRKAG3Q9UGI9 489 aa11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 INO80Q9ULG1 1556 aaPredicted RBP11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 CYP7B1O75881 506 aa11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 SERPINF2P08697 491 aa11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 PAICSP22234 425 aaKnown RBP11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 EPHX2P34913 555 aa11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 PLIN5Q00G26 463 aa11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 FAM172AQ8WUF8 416 aa11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 IARS2Q9NSE4 1012 aaKnown RBP11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 TDRKHQ9Y2W6 561 aaKnown RBP11.46□□□□□ -0.57
CCDC144B-208ENST00000618081 CD163L1Q9NR16 1453 aa11.46□□□□□ -0.58
CCDC144B-208ENST00000618081 SLC12A8A0AV02 714 aa11.46□□□□□ -0.58
CCDC144B-208ENST00000618081 TMEM191CA6NGB0 347 aa11.46□□□□□ -0.58
CCDC144B-208ENST00000618081 KRT6AP02538 564 aa11.46□□□□□ -0.58
CCDC144B-208ENST00000618081 KRT6BP04259 564 aa11.46□□□□□ -0.58
CCDC144B-208ENST00000618081 KRT6CP48668 564 aa11.46□□□□□ -0.58
CCDC144B-208ENST00000618081 BST2Q10589 180 aaKnown RBP11.46□□□□□ -0.58
CCDC144B-208ENST00000618081 MAPK7Q13164 816 aa11.46□□□□□ -0.58
CCDC144B-208ENST00000618081 COL23A1Q86Y22 540 aaPredicted RBP11.46□□□□□ -0.58
CCDC144B-208ENST00000618081 WDR49Q8IV35 697 aa11.46□□□□□ -0.58
CCDC144B-208ENST00000618081 SMARCD1Q96GM5 515 aa11.46□□□□□ -0.58
CCDC144B-208ENST00000618081 MTG1Q9BT17 334 aaPredicted RBP11.46□□□□□ -0.58
CCDC144B-208ENST00000618081 GTF3C4Q9UKN8 822 aa11.46□□□□□ -0.58
CCDC144B-208ENST00000618081 HS6ST1O60243 411 aa11.46□□□□□ -0.58
CCDC144B-208ENST00000618081 TARSP26639 723 aaKnown RBP11.46□□□□□ -0.58
CCDC144B-208ENST00000618081 INAQ16352 499 aa11.46□□□□□ -0.58
CCDC144B-208ENST00000618081 ATG9AQ7Z3C6 839 aa11.46□□□□□ -0.58
CCDC144B-208ENST00000618081 EPHX4Q8IUS5 362 aa11.46□□□□□ -0.58
CCDC144B-208ENST00000618081 SH2D3CQ8N5H7 860 aa11.46□□□□□ -0.58
CCDC144B-208ENST00000618081 ATG4CQ96DT6 458 aa11.46□□□□□ -0.58
CCDC144B-208ENST00000618081 FAM153AQ9UHL3 310 aa11.46□□□□□ -0.58
CCDC144B-208ENST00000618081 CYP11B1P15538 503 aa11.46□□□□□ -0.58
CCDC144B-208ENST00000618081 STK4Q13043 487 aa11.46□□□□□ -0.58
CCDC144B-208ENST00000618081 NR6A1Q15406 480 aa11.46□□□□□ -0.58
CCDC144B-208ENST00000618081 RABL6Q3YEC7 729 aaPredicted RBP11.46□□□□□ -0.58
CCDC144B-208ENST00000618081 CCDC153Q494R4 210 aa11.46□□□□□ -0.58
CCDC144B-208ENST00000618081 SETMARQ53H47 684 aaPredicted RBP11.46□□□□□ -0.58
CCDC144B-208ENST00000618081 PRAMEF18Q5VWM3 479 aa11.46□□□□□ -0.58
CCDC144B-208ENST00000618081 CDC73Q6P1J9 531 aa11.46□□□□□ -0.58
CCDC144B-208ENST00000618081 CASP12Q6UXS9 341 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms