RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 C6orf89Q6UWU4 347 aa18.19■□□□□ 0.5
CNOT3-209ENST00000617930 CROCCP2Q86T23 111 aa18.19■□□□□ 0.5
CNOT3-209ENST00000617930 FAM35AQ86V20 835 aa18.19■□□□□ 0.5
CNOT3-209ENST00000617930 EXOC3L1Q86VI1 746 aa18.19■□□□□ 0.5
CNOT3-209ENST00000617930 FAM131BQ86XD5 332 aa18.19■□□□□ 0.5
CNOT3-209ENST00000617930 CCDC33Q8N5R6 958 aa18.19■□□□□ 0.5
CNOT3-209ENST00000617930 P3H4Q92791 437 aa18.19■□□□□ 0.5
CNOT3-209ENST00000617930 SEC16BQ96JE7 1060 aa18.19■□□□□ 0.5
CNOT3-209ENST00000617930 TMEM209Q96SK2 561 aa18.19■□□□□ 0.5
CNOT3-209ENST00000617930 MED10Q9BTT4 135 aa18.19■□□□□ 0.5
CNOT3-209ENST00000617930 ROPN1BQ9BZX4 212 aaPredicted RBP18.19■□□□□ 0.5
CNOT3-209ENST00000617930 ROPN1Q9HAT0 212 aaPredicted RBP18.19■□□□□ 0.5
CNOT3-209ENST00000617930 ETNK2Q9NVF9 386 aa18.19■□□□□ 0.5
CNOT3-209ENST00000617930 TMLHEQ9NVH6 421 aa18.19■□□□□ 0.5
CNOT3-209ENST00000617930 EURLQ9NYK6 297 aa18.19■□□□□ 0.5
CNOT3-209ENST00000617930 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.19■□□□□ 0.5
CNOT3-209ENST00000617930 USP3Q9Y6I4 520 aa18.19■□□□□ 0.5
CNOT3-209ENST00000617930 C5orf60A6NFR6 353 aa18.18■□□□□ 0.5
CNOT3-209ENST00000617930 I6L893 689 aaPredicted RBP18.18■□□□□ 0.5
CNOT3-209ENST00000617930 MCF2LO15068 1137 aa18.18■□□□□ 0.5
CNOT3-209ENST00000617930 B3GAT3O94766 335 aa18.18■□□□□ 0.5
CNOT3-209ENST00000617930 CYP2C18P33260 490 aa18.18■□□□□ 0.5
CNOT3-209ENST00000617930 LHX1P48742 406 aa18.18■□□□□ 0.5
CNOT3-209ENST00000617930 GATMP50440 423 aa18.18■□□□□ 0.5
CNOT3-209ENST00000617930 TKTL1P51854 596 aa18.18■□□□□ 0.5
CNOT3-209ENST00000617930 YWHAZP63104 245 aaKnown RBP18.18■□□□□ 0.5
CNOT3-209ENST00000617930 GBE1Q04446 702 aa18.18■□□□□ 0.5
CNOT3-209ENST00000617930 ACTN3Q08043 901 aaPredicted RBP18.18■□□□□ 0.5
CNOT3-209ENST00000617930 SLC25A52Q3SY17 297 aa18.18■□□□□ 0.5
CNOT3-209ENST00000617930 DCAF6Q58WW2 860 aa18.18■□□□□ 0.5
CNOT3-209ENST00000617930 EFHC1Q5JVL4 640 aa18.18■□□□□ 0.5
CNOT3-209ENST00000617930 GKAP1Q5VSY0 366 aaPredicted RBP18.18■□□□□ 0.5
CNOT3-209ENST00000617930 SLC24A5Q71RS6 500 aa18.18■□□□□ 0.5
CNOT3-209ENST00000617930 BHLHA9Q7RTU4 235 aa18.18■□□□□ 0.5
CNOT3-209ENST00000617930 ZNF280BQ86YH2 543 aa18.18■□□□□ 0.5
CNOT3-209ENST00000617930 CCDC13Q8IYE1 715 aa18.18■□□□□ 0.5
CNOT3-209ENST00000617930 HACE1Q8IYU2 909 aa18.18■□□□□ 0.5
CNOT3-209ENST00000617930 TMEM86AQ8N2M4 240 aa18.18■□□□□ 0.5
CNOT3-209ENST00000617930 XPO6Q96QU8 1125 aaKnown RBP18.18■□□□□ 0.5
CNOT3-209ENST00000617930 ZNF670Q9BS34 389 aa18.18■□□□□ 0.5
CNOT3-209ENST00000617930 DHX35Q9H5Z1 703 aaKnown RBP18.18■□□□□ 0.5
CNOT3-209ENST00000617930 NRDE2Q9H7Z3 1164 aa18.18■□□□□ 0.5
CNOT3-209ENST00000617930 ACTR5Q9H9F9 607 aaPredicted RBP18.18■□□□□ 0.5
CNOT3-209ENST00000617930 ANLNQ9NQW6 1124 aa18.18■□□□□ 0.5
CNOT3-209ENST00000617930 HCSTQ9UBK5 93 aa18.18■□□□□ 0.5
CNOT3-209ENST00000617930 AP4E1Q9UPM8 1137 aa18.18■□□□□ 0.5
CNOT3-209ENST00000617930 HEY1Q9Y5J3 304 aa18.18■□□□□ 0.5
CNOT3-209ENST00000617930 YJEFN3A6XGL0 299 aa18.18■□□□□ 0.5
CNOT3-209ENST00000617930 E7ENQ6 273 aa18.18■□□□□ 0.5
CNOT3-209ENST00000617930 PITPNM1O00562 1244 aa18.18■□□□□ 0.5
CNOT3-209ENST00000617930 ALOX15BO15296 676 aa18.18■□□□□ 0.5
CNOT3-209ENST00000617930 INPPL1O15357 1258 aa18.18■□□□□ 0.5
CNOT3-209ENST00000617930 TCEA3O75764 348 aa18.18■□□□□ 0.5
CNOT3-209ENST00000617930 DDHD2O94830 711 aa18.18■□□□□ 0.5
CNOT3-209ENST00000617930 AGTP01019 485 aa18.18■□□□□ 0.5
CNOT3-209ENST00000617930 CYP2F1P24903 491 aa18.18■□□□□ 0.5
CNOT3-209ENST00000617930 BFSP2Q13515 415 aa18.18■□□□□ 0.5
CNOT3-209ENST00000617930 TFDP2Q14188 446 aa18.18■□□□□ 0.5
CNOT3-209ENST00000617930 DARS2Q6PI48 645 aaKnown RBP18.18■□□□□ 0.5
CNOT3-209ENST00000617930 LRRTM3Q86VH5 581 aa18.18■□□□□ 0.5
CNOT3-209ENST00000617930 MAP7D3Q8IWC1 876 aa18.18■□□□□ 0.5
CNOT3-209ENST00000617930 FAM149B1Q96BN6 582 aa18.18■□□□□ 0.5
CNOT3-209ENST00000617930 NPY6RQ99463 290 aa18.18■□□□□ 0.5
CNOT3-209ENST00000617930 ULBP1Q9BZM6 244 aa18.18■□□□□ 0.5
CNOT3-209ENST00000617930 SHOC2Q9UQ13 582 aa18.18■□□□□ 0.5
CNOT3-209ENST00000617930 NAALADL1Q9UQQ1 740 aa18.18■□□□□ 0.5
CNOT3-209ENST00000617930 ENPP3O14638 875 aa18.17■□□□□ 0.5
CNOT3-209ENST00000617930 APOL1O14791 398 aa18.17■□□□□ 0.5
CNOT3-209ENST00000617930 AP1G2O75843 785 aa18.17■□□□□ 0.5
CNOT3-209ENST00000617930 FAM200BP0CF97 657 aa18.17■□□□□ 0.5
CNOT3-209ENST00000617930 CHN1P15882 459 aa18.17■□□□□ 0.5
CNOT3-209ENST00000617930 RBL1P28749 1068 aa18.17■□□□□ 0.5
CNOT3-209ENST00000617930 GTF2A1P52655 376 aaPredicted RBP18.17■□□□□ 0.5
CNOT3-209ENST00000617930 GPX6P59796 221 aa18.17■□□□□ 0.5
CNOT3-209ENST00000617930 ROR1Q01973 937 aa18.17■□□□□ 0.5
CNOT3-209ENST00000617930 SYCP2LQ5T4T6 812 aa18.17■□□□□ 0.5
CNOT3-209ENST00000617930 STRADAQ7RTN6 431 aa18.17■□□□□ 0.5
CNOT3-209ENST00000617930 CENPTQ96BT3 561 aa18.17■□□□□ 0.5
CNOT3-209ENST00000617930 CHMP6Q96FZ7 201 aa18.17■□□□□ 0.5
CNOT3-209ENST00000617930 CSPG4P5Q96PW8 444 aa18.17■□□□□ 0.5
CNOT3-209ENST00000617930 SLC2A13Q96QE2 648 aa18.17■□□□□ 0.5
CNOT3-209ENST00000617930 PKMYT1Q99640 499 aa18.17■□□□□ 0.5
CNOT3-209ENST00000617930 FOXP3Q9BZS1 431 aa18.17■□□□□ 0.5
CNOT3-209ENST00000617930 STMN4Q9H169 189 aaPredicted RBP18.17■□□□□ 0.5
CNOT3-209ENST00000617930 UBN1Q9NPG3 1134 aa18.17■□□□□ 0.5
CNOT3-209ENST00000617930 FZD10Q9ULW2 581 aa18.17■□□□□ 0.5
CNOT3-209ENST00000617930 NR2E3Q9Y5X4 410 aa18.17■□□□□ 0.5
CNOT3-209ENST00000617930 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.16■□□□□ 0.5
CNOT3-209ENST00000617930 DAB1O75553 588 aa18.16■□□□□ 0.5
CNOT3-209ENST00000617930 GOT1P17174 413 aa18.16■□□□□ 0.5
CNOT3-209ENST00000617930 SULT1E1P49888 294 aa18.16■□□□□ 0.5
CNOT3-209ENST00000617930 BCAR1P56945 870 aa18.16■□□□□ 0.5
CNOT3-209ENST00000617930 RAB41Q5JT25 222 aa18.16■□□□□ 0.5
CNOT3-209ENST00000617930 VSIG1Q86XK7 387 aa18.16■□□□□ 0.5
CNOT3-209ENST00000617930 PPIL6Q8IXY8 311 aa18.16■□□□□ 0.5
CNOT3-209ENST00000617930 ZBED8Q8IZ13 594 aa18.16■□□□□ 0.5
CNOT3-209ENST00000617930 CRIPAKQ8N1N5 446 aa18.16■□□□□ 0.5
CNOT3-209ENST00000617930 NETO2Q8NC67 525 aa18.16■□□□□ 0.5
CNOT3-209ENST00000617930 OR10T2Q8NGX3 314 aa18.16■□□□□ 0.5
CNOT3-209ENST00000617930 SERPINB12Q96P63 405 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms