RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 SEC14L1Q92503 715 aa7.62□□□□□ -1.19
PDE6A-205ENST00000617647 VPS33AQ96AX1 596 aa7.62□□□□□ -1.19
PDE6A-205ENST00000617647 CNDP1Q96KN2 507 aa7.62□□□□□ -1.19
PDE6A-205ENST00000617647 PSKH2Q96QS6 385 aa7.62□□□□□ -1.19
PDE6A-205ENST00000617647 AGPAT1Q99943 283 aa7.62□□□□□ -1.19
PDE6A-205ENST00000617647 AIFM2Q9BRQ8 373 aa7.62□□□□□ -1.19
PDE6A-205ENST00000617647 IARS2Q9NSE4 1012 aaKnown RBP7.62□□□□□ -1.19
PDE6A-205ENST00000617647 LRRC4BQ9NT99 713 aa7.62□□□□□ -1.19
PDE6A-205ENST00000617647 RWDD3Q9Y3V2 267 aa7.62□□□□□ -1.19
PDE6A-205ENST00000617647 FAM172BPA6NC97 362 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 C16orf96A6NNT2 1141 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 C12orf71A8MTZ7 269 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 AREL1O15033 823 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 DENRO43583 198 aaKnown RBP7.61□□□□□ -1.19
PDE6A-205ENST00000617647 SORBS3O60504 671 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 GPD2P43304 727 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 PHKA1P46020 1223 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 ADGRG6Q86SQ4 1221 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 SLCO6A1Q86UG4 719 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 ARHGEF19Q8IW93 802 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 C12orf50Q8NA57 414 aaPredicted RBP7.61□□□□□ -1.19
PDE6A-205ENST00000617647 TRUB1Q8WWH5 349 aaKnown RBP7.61□□□□□ -1.19
PDE6A-205ENST00000617647 SDCCAG3Q96C92 435 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 TMEM246Q9BRR3 403 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 EMILIN2Q9BXX0 1053 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 THAP1Q9NVV9 213 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 CRNNQ9UBG3 495 aaPredicted RBP7.61□□□□□ -1.19
PDE6A-205ENST00000617647 KIAA1257Q9ULG3 409 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 XRN1Q8IZH2 1706 aaKnown RBP7.61□□□□□ -1.19
PDE6A-205ENST00000617647 PIK3R2O00459 728 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 NKRFO15226 690 aaKnown RBP eCLIP7.61□□□□□ -1.19
PDE6A-205ENST00000617647 KRT1P04264 644 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 SERPINA6P08185 405 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 PON1P27169 355 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 CCND2P30279 289 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 ZNF76P36508 570 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 KCNQ4P56696 695 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 ADGRE1Q14246 886 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 PPP2R5DQ14738 602 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 BCL2A1Q16548 175 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 AKAP4Q5JQC9 854 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 FGD3Q5JSP0 725 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 IL23RQ5VWK5 629 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 IQSEC1Q6DN90 963 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 BORAQ6PGQ7 559 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 KYAT3Q6YP21 454 aaKnown RBP7.61□□□□□ -1.19
PDE6A-205ENST00000617647 TRMT1LQ7Z2T5 733 aaKnown RBP7.61□□□□□ -1.19
PDE6A-205ENST00000617647 GLIS3Q8NEA6 775 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 RIN3Q8TB24 985 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 STRBPQ96SI9 672 aaKnown RBP7.61□□□□□ -1.19
PDE6A-205ENST00000617647 MECRQ9BV79 373 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 BCS1LQ9Y276 419 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 FIS1Q9Y3D6 152 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 UBE4BO95155 1302 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 MYH7P12883 1935 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 ARHGEF15O94989 841 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 CALB1P05937 261 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 WEE2P0C1S8 567 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 RALAP11233 206 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 CD58P19256 250 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 PRKAA2P54646 552 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 IL1RL1Q01638 556 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 PRPSAP1Q14558 356 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 PLEKHG4Q58EX7 1191 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 HABP4Q5JVS0 413 aaKnown RBP7.61□□□□□ -1.19
PDE6A-205ENST00000617647 NANOGP8Q6NSW7 305 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 DCUN1D2Q6PH85 259 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 ZNF804AQ7Z570 1209 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 GPR180Q86V85 440 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 ZC3H7AQ8IWR0 971 aaKnown RBP7.61□□□□□ -1.19
PDE6A-205ENST00000617647 UNC45BQ8IWX7 931 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 GALNT12Q8IXK2 581 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 NDUFAF2Q8N183 169 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 KYQ8NBH2 561 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 MINDY2Q8NBR6 621 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 ANKK1Q8NFD2 765 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 SEPT1Q8WYJ6 367 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 B3GALT6Q96L58 329 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 CIB1Q99828 191 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 KIFC3Q9BVG8 833 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 PRM3Q9NNZ6 103 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 KLHL11Q9NVR0 708 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 ADPRHL2Q9NX46 363 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 ZNHIT2Q9UHR6 403 aa7.61□□□□□ -1.19
PDE6A-205ENST00000617647 USP31Q70CQ4 1352 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 ADAMTS13Q76LX8 1427 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 H3BUI4 141 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 DDAH1O94760 285 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 SEC24AO95486 1093 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 PCCAP05165 728 aaPredicted RBP7.6□□□□□ -1.19
PDE6A-205ENST00000617647 IL10P22301 178 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 ME2P23368 584 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 IL12AP29459 219 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 HADHAP40939 763 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 IL17AQ16552 155 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 DGUOKQ16854 277 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 NAALADL2Q58DX5 795 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 CYP2R1Q6VVX0 501 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 SLC30A10Q6XR72 485 aa7.6□□□□□ -1.19
PDE6A-205ENST00000617647 PLEKHM3Q6ZWE6 761 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms