RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 CCDC185Q8N715 623 aa15.79■□□□□ 0.12
CBWD1-225ENST00000616944 CMASQ8NFW8 434 aaPredicted RBP15.79■□□□□ 0.12
CBWD1-225ENST00000616944 VN1R2Q8NFZ6 395 aa15.79■□□□□ 0.12
CBWD1-225ENST00000616944 EXD1Q8NHP7 514 aa15.79■□□□□ 0.12
CBWD1-225ENST00000616944 ZNF512Q96ME7 567 aaPredicted RBP15.79■□□□□ 0.12
CBWD1-225ENST00000616944 SNRNP25Q9BV90 132 aaKnown RBP15.79■□□□□ 0.12
CBWD1-225ENST00000616944 CCSER2Q9H7U1 834 aa15.79■□□□□ 0.12
CBWD1-225ENST00000616944 FAM204AQ9H8W3 233 aa15.79■□□□□ 0.12
CBWD1-225ENST00000616944 ZWILCHQ9H900 591 aa15.79■□□□□ 0.12
CBWD1-225ENST00000616944 OLA1Q9NTK5 396 aaKnown RBP15.79■□□□□ 0.12
CBWD1-225ENST00000616944 TTC7AQ9ULT0 858 aaPredicted RBP15.79■□□□□ 0.12
CBWD1-225ENST00000616944 C5orf42Q9H799 3197 aa15.79■□□□□ 0.12
CBWD1-225ENST00000616944 PDE2AO00408 941 aaPredicted RBP15.79■□□□□ 0.12
CBWD1-225ENST00000616944 TLR5O60602 858 aa15.79■□□□□ 0.12
CBWD1-225ENST00000616944 RALAP11233 206 aa15.79■□□□□ 0.12
CBWD1-225ENST00000616944 GJC1P36383 396 aa15.79■□□□□ 0.12
CBWD1-225ENST00000616944 NRIP1P48552 1158 aa15.79■□□□□ 0.12
CBWD1-225ENST00000616944 ARSEP51690 589 aa15.79■□□□□ 0.12
CBWD1-225ENST00000616944 RBM10P98175 930 aaKnown RBP15.79■□□□□ 0.12
CBWD1-225ENST00000616944 SCAPQ12770 1279 aa15.79■□□□□ 0.12
CBWD1-225ENST00000616944 NME3Q13232 169 aa15.79■□□□□ 0.12
CBWD1-225ENST00000616944 ZNF211Q13398 564 aaPredicted RBP15.79■□□□□ 0.12
CBWD1-225ENST00000616944 NNTQ13423 1086 aa15.79■□□□□ 0.12
CBWD1-225ENST00000616944 WHAMMP3Q1A5X7 153 aa15.79■□□□□ 0.12
CBWD1-225ENST00000616944 BOLA3Q53S33 107 aa15.79■□□□□ 0.12
CBWD1-225ENST00000616944 AADACL2Q6P093 401 aa15.79■□□□□ 0.12
CBWD1-225ENST00000616944 KLHDC10Q6PID8 442 aa15.79■□□□□ 0.12
CBWD1-225ENST00000616944 GAREM2Q75VX8 874 aa15.79■□□□□ 0.12
CBWD1-225ENST00000616944 ANKS1BQ7Z6G8 1248 aa15.79■□□□□ 0.12
CBWD1-225ENST00000616944 FAM71BQ8TC56 605 aa15.79■□□□□ 0.12
CBWD1-225ENST00000616944 RNF139Q8WU17 664 aa15.79■□□□□ 0.12
CBWD1-225ENST00000616944 RAPGEF5Q92565 580 aa15.79■□□□□ 0.12
CBWD1-225ENST00000616944 NTAN1Q96AB6 310 aa15.79■□□□□ 0.12
CBWD1-225ENST00000616944 ACSF2Q96CM8 615 aaPredicted RBP15.79■□□□□ 0.12
CBWD1-225ENST00000616944 MS4A14Q96JA4 679 aa15.79■□□□□ 0.12
CBWD1-225ENST00000616944 SERPINB11Q96P15 392 aa15.79■□□□□ 0.12
CBWD1-225ENST00000616944 CDK5RAP1Q96SZ6 601 aaKnown RBP15.79■□□□□ 0.12
CBWD1-225ENST00000616944 CDCA3Q99618 268 aaPredicted RBP15.79■□□□□ 0.12
CBWD1-225ENST00000616944 ANLNQ9NQW6 1124 aa15.79■□□□□ 0.12
CBWD1-225ENST00000616944 KLHL11Q9NVR0 708 aa15.79■□□□□ 0.12
CBWD1-225ENST00000616944 ZDHHC7Q9NXF8 308 aa15.79■□□□□ 0.12
CBWD1-225ENST00000616944 DDX56Q9NY93 547 aaKnown RBP15.79■□□□□ 0.12
CBWD1-225ENST00000616944 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.79■□□□□ 0.12
CBWD1-225ENST00000616944 TRPM5Q9NZQ8 1165 aa15.79■□□□□ 0.12
CBWD1-225ENST00000616944 SFMBT1Q9UHJ3 866 aa15.79■□□□□ 0.12
CBWD1-225ENST00000616944 DPP7Q9UHL4 492 aa15.79■□□□□ 0.12
CBWD1-225ENST00000616944 TMEM265A0A087WTH1 108 aa15.78■□□□□ 0.12
CBWD1-225ENST00000616944 CCL16O15467 120 aa15.78■□□□□ 0.12
CBWD1-225ENST00000616944 MSI1O43347 362 aaKnown RBP15.78■□□□□ 0.12
CBWD1-225ENST00000616944 ZRANB2O95218 330 aaKnown RBP eCLIP15.78■□□□□ 0.12
CBWD1-225ENST00000616944 TBX18O95935 607 aa15.78■□□□□ 0.12
CBWD1-225ENST00000616944 OAS1P00973 400 aaKnown RBP15.78■□□□□ 0.12
CBWD1-225ENST00000616944 GTF2F1P35269 517 aaKnown RBP eCLIP15.78■□□□□ 0.12
CBWD1-225ENST00000616944 AIF1P55008 147 aa15.78■□□□□ 0.12
CBWD1-225ENST00000616944 TAZQ16635 292 aa15.78■□□□□ 0.12
CBWD1-225ENST00000616944 ERMARDQ5T6L9 678 aa15.78■□□□□ 0.12
CBWD1-225ENST00000616944 SCYL2Q6P3W7 929 aa15.78■□□□□ 0.12
CBWD1-225ENST00000616944 RSRC2Q7L4I2 434 aaKnown RBP15.78■□□□□ 0.12
CBWD1-225ENST00000616944 PSTKQ8IV42 348 aaKnown RBP15.78■□□□□ 0.12
CBWD1-225ENST00000616944 ELMOD1Q8N336 334 aa15.78■□□□□ 0.12
CBWD1-225ENST00000616944 ACTRT1Q8TDG2 376 aa15.78■□□□□ 0.12
CBWD1-225ENST00000616944 ZNF707Q96C28 371 aaPredicted RBP15.78■□□□□ 0.12
CBWD1-225ENST00000616944 SLC39A13Q96H72 371 aa15.78■□□□□ 0.12
CBWD1-225ENST00000616944 CAPZA3Q96KX2 299 aa15.78■□□□□ 0.12
CBWD1-225ENST00000616944 TTYH1Q9H313 450 aaPredicted RBP15.78■□□□□ 0.12
CBWD1-225ENST00000616944 NUP210Q8TEM1 1887 aaPredicted RBP15.78■□□□□ 0.12
CBWD1-225ENST00000616944 SYNJ2BP-COX16A0A087WUM0 186 aa15.77■□□□□ 0.12
CBWD1-225ENST00000616944 NRG2O14511 850 aaPredicted RBP15.77■□□□□ 0.12
CBWD1-225ENST00000616944 OLFM2O95897 454 aa15.77■□□□□ 0.12
CBWD1-225ENST00000616944 IGLV3-27P01718 113 aa15.77■□□□□ 0.12
CBWD1-225ENST00000616944 KRT1P04264 644 aa15.77■□□□□ 0.12
CBWD1-225ENST00000616944 GBP1P32455 592 aa15.77■□□□□ 0.12
CBWD1-225ENST00000616944 PTPN7P35236 360 aa15.77■□□□□ 0.12
CBWD1-225ENST00000616944 DPYSL2Q16555 572 aa15.77■□□□□ 0.12
CBWD1-225ENST00000616944 CA9Q16790 459 aa15.77■□□□□ 0.12
CBWD1-225ENST00000616944 C10orf120Q5SQS8 335 aa15.77■□□□□ 0.12
CBWD1-225ENST00000616944 ZNF572Q7Z3I7 529 aaPredicted RBP15.77■□□□□ 0.12
CBWD1-225ENST00000616944 RCOR2Q8IZ40 523 aa15.77■□□□□ 0.12
CBWD1-225ENST00000616944 HS6ST3Q8IZP7 471 aa15.77■□□□□ 0.12
CBWD1-225ENST00000616944 HERPUD2Q9BSE4 406 aa15.77■□□□□ 0.12
CBWD1-225ENST00000616944 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.77■□□□□ 0.12
CBWD1-225ENST00000616944 TMEM51Q9NW97 253 aa15.77■□□□□ 0.12
CBWD1-225ENST00000616944 HCFC1R1Q9NWW0 138 aa15.77■□□□□ 0.12
CBWD1-225ENST00000616944 MTMR10Q9NXD2 777 aa15.77■□□□□ 0.12
CBWD1-225ENST00000616944 ARHGEF38Q9NXL2 777 aa15.77■□□□□ 0.12
CBWD1-225ENST00000616944 MARCH2Q9P0N8 246 aa15.77■□□□□ 0.12
CBWD1-225ENST00000616944 COX16Q9P0S2 106 aa15.77■□□□□ 0.12
CBWD1-225ENST00000616944 RNF14Q9UBS8 474 aa15.77■□□□□ 0.12
CBWD1-225ENST00000616944 FZD10Q9ULW2 581 aa15.77■□□□□ 0.12
CBWD1-225ENST00000616944 TLR6Q9Y2C9 796 aa15.77■□□□□ 0.12
CBWD1-225ENST00000616944 C2orf78A6NCI8 922 aa15.76■□□□□ 0.11
CBWD1-225ENST00000616944 COCHO43405 550 aa15.76■□□□□ 0.11
CBWD1-225ENST00000616944 CEP104O60308 925 aa15.76■□□□□ 0.11
CBWD1-225ENST00000616944 GLP2RO95838 553 aa15.76■□□□□ 0.11
CBWD1-225ENST00000616944 CD48P09326 243 aa15.76■□□□□ 0.11
CBWD1-225ENST00000616944 KDELR1P24390 212 aa15.76■□□□□ 0.11
CBWD1-225ENST00000616944 GABRR2P28476 465 aa15.76■□□□□ 0.11
CBWD1-225ENST00000616944 ADRA1BP35368 520 aa15.76■□□□□ 0.11
CBWD1-225ENST00000616944 CDKN2BP42772 138 aa15.76■□□□□ 0.11
CBWD1-225ENST00000616944 COPS2P61201 443 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms