RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 DGKDQ16760 1214 aa14.39□□□□□ -0.11
CACNA1C-231ENST00000616390 MROH9Q5TGP6 573 aa14.39□□□□□ -0.11
CACNA1C-231ENST00000616390 SLC27A1Q6PCB7 646 aa14.39□□□□□ -0.11
CACNA1C-231ENST00000616390 CAND1Q86VP6 1230 aaKnown RBP14.39□□□□□ -0.11
CACNA1C-231ENST00000616390 IFNLR1Q8IU57 520 aaPredicted RBP14.39□□□□□ -0.11
CACNA1C-231ENST00000616390 GCOM2Q9BZD3 368 aaPredicted RBP14.39□□□□□ -0.11
CACNA1C-231ENST00000616390 SEPT10Q9P0V9 454 aa14.39□□□□□ -0.11
CACNA1C-231ENST00000616390 ZFP69BQ9UJL9 534 aa14.39□□□□□ -0.11
CACNA1C-231ENST00000616390 PLXNB2O15031 1838 aa14.38□□□□□ -0.11
CACNA1C-231ENST00000616390 CLDN5O00501 218 aa14.38□□□□□ -0.11
CACNA1C-231ENST00000616390 GOT1P17174 413 aa14.38□□□□□ -0.11
CACNA1C-231ENST00000616390 SLC8A1P32418 973 aa14.38□□□□□ -0.11
CACNA1C-231ENST00000616390 SLC5A9Q2M3M2 681 aa14.38□□□□□ -0.11
CACNA1C-231ENST00000616390 TRMT10BQ6PF06 316 aaKnown RBP14.38□□□□□ -0.11
CACNA1C-231ENST00000616390 KCNT2Q6UVM3 1135 aa14.38□□□□□ -0.11
CACNA1C-231ENST00000616390 CDHR3Q6ZTQ4 885 aa14.38□□□□□ -0.11
CACNA1C-231ENST00000616390 ASRGL1Q7L266 308 aa14.38□□□□□ -0.11
CACNA1C-231ENST00000616390 GPR142Q7Z601 462 aa14.38□□□□□ -0.11
CACNA1C-231ENST00000616390 UNC5BQ8IZJ1 945 aa14.38□□□□□ -0.11
CACNA1C-231ENST00000616390 SLC44A1Q8WWI5 657 aa14.38□□□□□ -0.11
CACNA1C-231ENST00000616390 DHRS4Q9BTZ2 278 aa14.38□□□□□ -0.11
CACNA1C-231ENST00000616390 TSSK1BQ9BXA7 367 aa14.38□□□□□ -0.11
CACNA1C-231ENST00000616390 SLC4A5Q9BY07 1137 aa14.38□□□□□ -0.11
CACNA1C-231ENST00000616390 AP4E1Q9UPM8 1137 aa14.38□□□□□ -0.11
CACNA1C-231ENST00000616390 CFAP69A5D8W1 941 aa14.38□□□□□ -0.11
CACNA1C-231ENST00000616390 SPTLC1O15269 473 aa14.38□□□□□ -0.11
CACNA1C-231ENST00000616390 CHADO15335 359 aa14.38□□□□□ -0.11
CACNA1C-231ENST00000616390 TOP3BO95985 862 aaKnown RBP14.38□□□□□ -0.11
CACNA1C-231ENST00000616390 TROVE2P10155 538 aaKnown RBP eCLIP14.38□□□□□ -0.11
CACNA1C-231ENST00000616390 CYP2C9P11712 490 aa14.38□□□□□ -0.11
CACNA1C-231ENST00000616390 YBX3P16989 372 aaKnown RBP eCLIP14.38□□□□□ -0.11
CACNA1C-231ENST00000616390 PDCD2Q16342 344 aaPredicted RBP14.38□□□□□ -0.11
CACNA1C-231ENST00000616390 KYAT1Q16773 422 aa14.38□□□□□ -0.11
CACNA1C-231ENST00000616390 C9orf57Q5W0N0 161 aa14.38□□□□□ -0.11
CACNA1C-231ENST00000616390 DENND5BQ6ZUT9 1274 aa14.38□□□□□ -0.11
CACNA1C-231ENST00000616390 TMEM110Q86TL2 294 aa14.38□□□□□ -0.11
CACNA1C-231ENST00000616390 SHCBP1Q8NEM2 672 aa14.38□□□□□ -0.11
CACNA1C-231ENST00000616390 SNX27Q96L92 541 aa14.38□□□□□ -0.11
CACNA1C-231ENST00000616390 LGMNQ99538 433 aa14.38□□□□□ -0.11
CACNA1C-231ENST00000616390 SMYD2Q9NRG4 433 aa14.38□□□□□ -0.11
CACNA1C-231ENST00000616390 TXLNGQ9NUQ3 528 aa14.38□□□□□ -0.11
CACNA1C-231ENST00000616390 SLC17A6Q9P2U8 582 aa14.38□□□□□ -0.11
CACNA1C-231ENST00000616390 MAGED2Q9UNF1 606 aaPredicted RBP14.38□□□□□ -0.11
CACNA1C-231ENST00000616390 COPEO14579 308 aa14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 DCTN3O75935 186 aa14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 KITP10721 976 aa14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 IMPDH2P12268 514 aa14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 IGFBP6P24592 240 aaPredicted RBP14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 L1CAMP32004 1257 aa14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 PITX1P78337 314 aaPredicted RBP14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 ZBTB16Q05516 673 aa14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 PKDCCQ504Y2 493 aa14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 KIRREL3Q8IZU9 778 aa14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 DRAXINQ8NBI3 349 aaPredicted RBP14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 C17orf50Q8WW18 174 aa14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 TMEM40Q8WWA1 233 aa14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 UTP4Q969X6 686 aaKnown RBP14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 TBCBQ99426 244 aa14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 SNX25Q9H3E2 840 aa14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 ZNF395Q9H8N7 513 aaPredicted RBP14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 PPCSQ9HAB8 311 aa14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 ANP32DO95626 131 aa14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 EPHB2P29323 1055 aa14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 NME3Q13232 169 aa14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 PREPLQ4J6C6 727 aaPredicted RBP14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 FBXO47Q5MNV8 452 aa14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 VPS52Q8N1B4 723 aa14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 GIMAP7Q8NHV1 300 aa14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 NPLOC4Q8TAT6 608 aa14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 MAML3Q96JK9 1138 aa14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 KCTD15Q96SI1 283 aaPredicted RBP14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 KATNBL1Q9H079 304 aa14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 ADAMTS10Q9H324 1103 aa14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 FBXO6Q9NRD1 293 aaPredicted RBP14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 IL1RAPL1Q9NZN1 696 aa14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 HEY2Q9UBP5 337 aa14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 TTLL3Q9Y4R7 772 aa14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 CYB561D2O14569 222 aa14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 TM9SF1O15321 606 aa14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 CREB3O43889 395 aa14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 SMIM10L2AP0DMW4 78 aa14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 SMIM10L2BP0DMW5 78 aa14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 TGM2P21980 687 aa14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 PEX19P40855 299 aa14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 SLC18A1P54219 525 aa14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 DCAF4L1Q3SXM0 396 aa14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 DUSP28Q4G0W2 176 aa14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 DCAF6Q58WW2 860 aa14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 ARMC3Q5W041 872 aa14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 HEATR6Q6AI08 1181 aaKnown RBP14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 NOTUMQ6P988 496 aa14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 SLC26A11Q86WA9 606 aa14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 CCNYQ8ND76 341 aa14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 ARMC2Q8NEN0 867 aa14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 PRR11Q96HE9 360 aaPredicted RBP14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 PGLYRP2Q96PD5 576 aa14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 SRPK1Q96SB4 655 aaKnown RBP14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 TINF2Q9BSI4 451 aa14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 MARCOQ9UEW3 520 aaPredicted RBP14.37□□□□□ -0.11
CACNA1C-231ENST00000616390 NUP205Q92621 2012 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms