RNA–Protein interactions for RNA: ENST00000615901.4

SPTBN1-207, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 5 BASIC

Gene SPTBN1, Length 10,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-207ENST00000615901 TAGLN3Q9UI15 199 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 CYP2C18P33260 490 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 MAP3K7CLP57077 242 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 DENND1BQ6P3S1 775 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 MYO1HQ8N1T3 1032 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 FBXO25Q8TCJ0 367 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 L3MBTL3Q96JM7 780 aaPredicted RBP9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 NDEL1Q9GZM8 345 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 RIPK2O43353 540 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 PPP3CCP48454 512 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 FKBP1BP68106 108 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 MKRN4PQ13434 485 aaPredicted RBP9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 HYIQ5T013 277 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 RMND5AQ9H871 391 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 STARD7Q9NQZ5 370 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 CYP39A1Q9NYL5 469 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 FAM95CA0A1B0GW59 222 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 CCDC78A2IDD5 438 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 KLRC4O43908 158 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 ERBB2P04626 1255 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 GRAMD4Q6IC98 578 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 MIB1Q86YT6 1006 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 MYH13Q9UKX3 1938 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 SPATA31C2B4DYI2 1134 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 LYPLA2O95372 231 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 GLP2RO95838 553 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 THRAP10827 490 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 VEGFAP15692 232 aaPredicted RBP9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 LRRC23Q53EV4 343 aaPredicted RBP9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 GRTP1Q5TC63 336 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 TATDN1Q6P1N9 297 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.39□□□□□ -0.911e-6■□□□□ 9.2
SPTBN1-207ENST00000615901 RRM2BQ7LG56 351 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 LRRC39Q96DD0 335 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 POPDC2Q9HBU9 364 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 SYTL2Q9HCH5 934 aa9.39□□□□□ -0.91
SPTBN1-207ENST00000615901 VPS4BO75351 444 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 ARIH2O95376 493 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 FAM131BQ86XD5 332 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 TATDN2Q93075 761 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 THTPAQ9BU02 230 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 DDX43Q9NXZ2 648 aaKnown RBP9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 CPA4Q9UI42 421 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 ACOT9Q9Y305 439 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 RAD54BQ9Y620 910 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 DDX3XO00571 662 aaKnown RBP eCLIP9.38□□□□□ -0.915e-26■■■■□ 24.3
SPTBN1-207ENST00000615901 CHADO15335 359 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 TBX4P57082 545 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 MIIPQ5JXC2 388 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 WLSQ5T9L3 541 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 HORMAD1Q86X24 394 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 FAM71AQ8IYT1 594 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 GPRC5DQ9NZD1 345 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 MPP6Q9NZW5 540 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 LOC102724159A0A0B4J2E5 919 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 DNALI1O14645 258 aaPredicted RBP9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 ASS1P00966 412 aaKnown RBP9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 ALADP13716 330 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 KLC1Q07866 573 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 PWP2Q15269 919 aaKnown RBP9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 MDM1Q8TC05 714 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 ADAM33Q9BZ11 813 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 EVPLLA8MZ36 301 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 MAMLD1Q13495 774 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 RGPD2P0DJD1 1756 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 AP5Z1O43299 807 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 RNASEH1O60930 286 aaKnown RBP9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 TFRCP02786 760 aaKnown RBP9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 FCGR1AP12314 374 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 CRABP2P29373 138 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 DNAJC3Q13217 504 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 PRMT9Q6P2P2 845 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 ZFPM1Q8IX07 1006 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 ZNF557Q8N988 423 aaPredicted RBP9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 CYGBQ8WWM9 190 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 PGM2Q96G03 612 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 SNTG2Q9NY99 539 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 UXTQ9UBK9 157 aaPredicted RBP9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 RHOCP08134 193 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 HNRNPH3P31942 346 aaKnown RBP9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 VHLP40337 213 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 TRIP10Q15642 601 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 CBWD6Q4V339 395 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 CBWD3Q5JTY5 395 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 CBWD5Q5RIA9 395 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 PDPK2PQ6A1A2 396 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 TBL1YQ9BQ87 522 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 ADNPQ9H2P0 1102 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 FAM124BQ9H5Z6 455 aaPredicted RBP9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 SLC40A1Q9NP59 571 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 PDP2Q9P2J9 529 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 CLCA2Q9UQC9 943 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 C2CD2Q9Y426 696 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 ANKRD65E5RJM6 399 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 CCDC60Q8IWA6 550 aaPredicted RBP9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 NT5MQ9NPB1 228 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 DOPEY2Q9Y3R5 2298 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 ROBO1Q9Y6N7 1651 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 KANSL1LA0AUZ9 987 aa9.38□□□□□ -0.91
SPTBN1-207ENST00000615901 NPY2RP49146 381 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms