RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 SDR42E2A6NKP2 422 aa12.95□□□□□ -0.34
MSH6-213ENST00000614496 CRCPO75575 148 aa12.95□□□□□ -0.34
MSH6-213ENST00000614496 ETS2P15036 469 aa12.95□□□□□ -0.34
MSH6-213ENST00000614496 AFAP1L2Q8N4X5 818 aa12.95□□□□□ -0.34
MSH6-213ENST00000614496 OLIG1Q8TAK6 271 aa12.95□□□□□ -0.34
MSH6-213ENST00000614496 DCAKDQ8WVC6 231 aa12.95□□□□□ -0.34
MSH6-213ENST00000614496 B3GNT5Q9BYG0 378 aa12.95□□□□□ -0.34
MSH6-213ENST00000614496 FRMD8Q9BZ67 464 aaPredicted RBP12.95□□□□□ -0.34
MSH6-213ENST00000614496 C20orf96Q9NUD7 363 aaPredicted RBP12.95□□□□□ -0.34
MSH6-213ENST00000614496 SNUPNO95149 360 aaKnown RBP12.95□□□□□ -0.34
MSH6-213ENST00000614496 POLBP06746 335 aa12.95□□□□□ -0.34
MSH6-213ENST00000614496 ERVK-10P10266 1014 aa12.95□□□□□ -0.34
MSH6-213ENST00000614496 PTPRAP18433 802 aa12.95□□□□□ -0.34
MSH6-213ENST00000614496 SP100P23497 879 aaPredicted RBP12.95□□□□□ -0.34
MSH6-213ENST00000614496 AVPR1AP37288 418 aa12.95□□□□□ -0.34
MSH6-213ENST00000614496 PEX6Q13608 980 aa12.95□□□□□ -0.34
MSH6-213ENST00000614496 PRPSAP1Q14558 356 aa12.95□□□□□ -0.34
MSH6-213ENST00000614496 TTLL4Q14679 1199 aa12.95□□□□□ -0.34
MSH6-213ENST00000614496 FKBP1CQ5VVH2 108 aa12.95□□□□□ -0.34
MSH6-213ENST00000614496 XYLT1Q86Y38 959 aa12.95□□□□□ -0.34
MSH6-213ENST00000614496 BEST2Q8NFU1 509 aa12.95□□□□□ -0.34
MSH6-213ENST00000614496 DENND1AQ8TEH3 1009 aa12.95□□□□□ -0.34
MSH6-213ENST00000614496 SH3TC2Q8TF17 1288 aa12.95□□□□□ -0.34
MSH6-213ENST00000614496 NUF2Q9BZD4 464 aa12.95□□□□□ -0.34
MSH6-213ENST00000614496 TMEM134Q9H6X4 195 aa12.95□□□□□ -0.34
MSH6-213ENST00000614496 ELP3Q9H9T3 547 aa12.95□□□□□ -0.34
MSH6-213ENST00000614496 EPS15L1Q9UBC2 864 aa12.95□□□□□ -0.34
MSH6-213ENST00000614496 CXorf49A8MYA2 514 aaPredicted RBP12.95□□□□□ -0.34
MSH6-213ENST00000614496 ACKR2O00590 384 aa12.95□□□□□ -0.34
MSH6-213ENST00000614496 TPP1O14773 563 aa12.95□□□□□ -0.34
MSH6-213ENST00000614496 TOP3BO95985 862 aaKnown RBP12.95□□□□□ -0.34
MSH6-213ENST00000614496 ZNF143P52747 638 aaPredicted RBP12.95□□□□□ -0.34
MSH6-213ENST00000614496 YWHAZP63104 245 aaKnown RBP12.95□□□□□ -0.34
MSH6-213ENST00000614496 SP2Q02086 613 aa12.95□□□□□ -0.34
MSH6-213ENST00000614496 DRICH1Q6PGQ1 229 aaPredicted RBP12.95□□□□□ -0.34
MSH6-213ENST00000614496 IYDQ6PHW0 289 aa12.95□□□□□ -0.34
MSH6-213ENST00000614496 CCNJLQ8IV13 435 aa12.95□□□□□ -0.34
MSH6-213ENST00000614496 TMEM130Q8N3G9 435 aa12.95□□□□□ -0.34
MSH6-213ENST00000614496 USP13Q92995 863 aaPredicted RBP12.95□□□□□ -0.34
MSH6-213ENST00000614496 OLFM3Q96PB7 478 aa12.95□□□□□ -0.34
MSH6-213ENST00000614496 TRPV6Q9H1D0 765 aa12.95□□□□□ -0.34
MSH6-213ENST00000614496 CDT1Q9H211 546 aa12.95□□□□□ -0.34
MSH6-213ENST00000614496 FAM96AQ9H5X1 160 aa12.95□□□□□ -0.34
MSH6-213ENST00000614496 DHX33Q9H6R0 707 aaKnown RBP12.95□□□□□ -0.34
MSH6-213ENST00000614496 HMGXB4Q9UGU5 601 aa12.95□□□□□ -0.34
MSH6-213ENST00000614496 SMCHD1A6NHR9 2005 aa12.94□□□□□ -0.34
MSH6-213ENST00000614496 KIF3CO14782 793 aa12.94□□□□□ -0.34
MSH6-213ENST00000614496 CHADO15335 359 aa12.94□□□□□ -0.34
MSH6-213ENST00000614496 CPA3P15088 417 aa12.94□□□□□ -0.34
MSH6-213ENST00000614496 TBL3Q12788 808 aaKnown RBP12.94□□□□□ -0.34
MSH6-213ENST00000614496 PDCD2Q16342 344 aaPredicted RBP12.94□□□□□ -0.34
MSH6-213ENST00000614496 UNC5AQ6ZN44 842 aa12.94□□□□□ -0.34
MSH6-213ENST00000614496 CHST13Q8NET6 341 aa12.94□□□□□ -0.34
MSH6-213ENST00000614496 CNBD2Q96M20 576 aa12.94□□□□□ -0.34
MSH6-213ENST00000614496 KCNK16Q96T55 309 aa12.94□□□□□ -0.34
MSH6-213ENST00000614496 PLLPQ9Y342 182 aa12.94□□□□□ -0.34
MSH6-213ENST00000614496 DTNAQ9Y4J8 743 aa12.94□□□□□ -0.34
MSH6-213ENST00000614496 HUS1O60921 280 aa12.94□□□□□ -0.34
MSH6-213ENST00000614496 EGFRP00533 1210 aa12.94□□□□□ -0.34
MSH6-213ENST00000614496 MSX2P35548 267 aaPredicted RBP12.94□□□□□ -0.34
MSH6-213ENST00000614496 GBE1Q04446 702 aa12.94□□□□□ -0.34
MSH6-213ENST00000614496 USP10Q14694 798 aaKnown RBP12.94□□□□□ -0.34
MSH6-213ENST00000614496 LAYNQ6UX15 382 aa12.94□□□□□ -0.34
MSH6-213ENST00000614496 METTL7BQ6UX53 244 aa12.94□□□□□ -0.34
MSH6-213ENST00000614496 TMEM192Q8IY95 271 aa12.94□□□□□ -0.34
MSH6-213ENST00000614496 PIWIL2Q8TC59 973 aaKnown RBP12.94□□□□□ -0.34
MSH6-213ENST00000614496 GDPD5Q8WTR4 605 aa12.94□□□□□ -0.34
MSH6-213ENST00000614496 EBF4Q9BQW3 602 aa12.94□□□□□ -0.34
MSH6-213ENST00000614496 PNPOQ9NVS9 261 aa12.94□□□□□ -0.34
MSH6-213ENST00000614496 SLC17A6Q9P2U8 582 aa12.94□□□□□ -0.34
MSH6-213ENST00000614496 BARX2Q9UMQ3 279 aaPredicted RBP12.94□□□□□ -0.34
MSH6-213ENST00000614496 ARHGAP26Q9UNA1 814 aa12.94□□□□□ -0.34
MSH6-213ENST00000614496 TPH1P17752 444 aa12.94□□□□□ -0.34
MSH6-213ENST00000614496 SPRP35270 261 aaPredicted RBP12.94□□□□□ -0.34
MSH6-213ENST00000614496 GTF2A2P52657 109 aa12.94□□□□□ -0.34
MSH6-213ENST00000614496 TMED1Q13445 227 aa12.94□□□□□ -0.34
MSH6-213ENST00000614496 NOMO1Q15155 1222 aa12.94□□□□□ -0.34
MSH6-213ENST00000614496 PLEKHG4Q58EX7 1191 aa12.94□□□□□ -0.34
MSH6-213ENST00000614496 HSP90AA5PQ58FG0 334 aa12.94□□□□□ -0.34
MSH6-213ENST00000614496 LPCAT4Q643R3 524 aa12.94□□□□□ -0.34
MSH6-213ENST00000614496 STRA8Q7Z7C7 330 aa12.94□□□□□ -0.34
MSH6-213ENST00000614496 DPP9Q86TI2 863 aa12.94□□□□□ -0.34
MSH6-213ENST00000614496 TNS4Q8IZW8 715 aa12.94□□□□□ -0.34
MSH6-213ENST00000614496 GCNAQ96QF7 691 aa12.94□□□□□ -0.34
MSH6-213ENST00000614496 SYT15Q9BQS2 421 aa12.94□□□□□ -0.34
MSH6-213ENST00000614496 ELOVL4Q9GZR5 314 aa12.94□□□□□ -0.34
MSH6-213ENST00000614496 T-ENOLP0DO92 83 aa12.93□□□□□ -0.34
MSH6-213ENST00000614496 RAG1P15918 1043 aa12.93□□□□□ -0.34
MSH6-213ENST00000614496 SOX11P35716 441 aa12.93□□□□□ -0.34
MSH6-213ENST00000614496 RARS2Q5T160 578 aaKnown RBP12.93□□□□□ -0.34
MSH6-213ENST00000614496 TMEM63BQ5T3F8 832 aa12.93□□□□□ -0.34
MSH6-213ENST00000614496 GJC2Q5T442 439 aaPredicted RBP12.93□□□□□ -0.34
MSH6-213ENST00000614496 VWA5B1Q5TIE3 1220 aa12.93□□□□□ -0.34
MSH6-213ENST00000614496 ARHGAP18Q8N392 663 aa12.93□□□□□ -0.34
MSH6-213ENST00000614496 DCPSQ96C86 337 aaKnown RBP12.93□□□□□ -0.34
MSH6-213ENST00000614496 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.93□□□□□ -0.34
MSH6-213ENST00000614496 HBP1O60381 514 aa12.93□□□□□ -0.34
MSH6-213ENST00000614496 ARL2P36404 184 aa12.93□□□□□ -0.34
MSH6-213ENST00000614496 ZNF252P-AS1Q0IIN9 211 aa12.93□□□□□ -0.34
MSH6-213ENST00000614496 DYNC1I2Q13409 638 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms