RNA–Protein interactions for RNA: ENST00000614197.4

NPIPB4-222, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 5 BASIC

Gene NPIPB4, Length 1,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-222	ENST00000614197	ABCC13	Q9NSE7	274 aa		11.48	□□□□□ -0.57
NPIPB4-222	ENST00000614197	KIAA1468	Q9P260	1216 aa		11.48	□□□□□ -0.57
NPIPB4-222	ENST00000614197	DACH1	Q9UI36	760 aa		11.48	□□□□□ -0.57
NPIPB4-222	ENST00000614197	INVS	Q9Y283	1065 aa		11.48	□□□□□ -0.57
NPIPB4-222	ENST00000614197	HBS1L	Q9Y450	684 aa	Known RBP	11.48	□□□□□ -0.57
NPIPB4-222	ENST00000614197	KIF26A	Q9ULI4	1882 aa	Predicted RBP	11.48	□□□□□ -0.57
NPIPB4-222	ENST00000614197	DENND4C	Q5VZ89	1909 aa		11.48	□□□□□ -0.57
NPIPB4-222	ENST00000614197	GVINP1	Q7Z2Y8	2422 aa		11.48	□□□□□ -0.57
NPIPB4-222	ENST00000614197	FANCM	Q8IYD8	2048 aa		11.47	□□□□□ -0.57
NPIPB4-222	ENST00000614197	PTPRD	P23468	1912 aa		11.47	□□□□□ -0.57
NPIPB4-222	ENST00000614197	SLC30A4	O14863	429 aa		11.47	□□□□□ -0.57
NPIPB4-222	ENST00000614197	DCLK1	O15075	740 aa		11.47	□□□□□ -0.57
NPIPB4-222	ENST00000614197	NPC1	O15118	1278 aa		11.47	□□□□□ -0.57
NPIPB4-222	ENST00000614197	FBXO21	O94952	628 aa		11.47	□□□□□ -0.57
NPIPB4-222	ENST00000614197	CAVIN2	O95810	425 aa		11.47	□□□□□ -0.57
NPIPB4-222	ENST00000614197	ZNF806	P0C7X5	589 aa		11.47	□□□□□ -0.57
NPIPB4-222	ENST00000614197	KIR2DL1	P43626	348 aa	Predicted RBP	11.47	□□□□□ -0.57
NPIPB4-222	ENST00000614197	DHPS	P49366	369 aa	Predicted RBP	11.47	□□□□□ -0.57
NPIPB4-222	ENST00000614197	ATXN1	P54253	815 aa	Known RBP	11.47	□□□□□ -0.57
NPIPB4-222	ENST00000614197	MFAP3	P55082	362 aa		11.47	□□□□□ -0.57
NPIPB4-222	ENST00000614197	EMC10	Q5UCC4	262 aa		11.47	□□□□□ -0.57
NPIPB4-222	ENST00000614197	BSPRY	Q5W0U4	402 aa		11.47	□□□□□ -0.57
NPIPB4-222	ENST00000614197	PM20D1	Q6GTS8	502 aa		11.47	□□□□□ -0.57
NPIPB4-222	ENST00000614197	RRAGA	Q7L523	313 aa		11.47	□□□□□ -0.57
NPIPB4-222	ENST00000614197	CCDC117	Q8IWD4	279 aa	Predicted RBP	11.47	□□□□□ -0.57
NPIPB4-222	ENST00000614197	FAM114A1	Q8IWE2	563 aa		11.47	□□□□□ -0.57
NPIPB4-222	ENST00000614197	TRIM59	Q8IWR1	403 aa		11.47	□□□□□ -0.57
NPIPB4-222	ENST00000614197	MLKL	Q8NB16	471 aa		11.47	□□□□□ -0.57
NPIPB4-222	ENST00000614197	MDGA1	Q8NFP4	955 aa		11.47	□□□□□ -0.57
NPIPB4-222	ENST00000614197	IRGQ	Q8WZA9	623 aa		11.47	□□□□□ -0.57
NPIPB4-222	ENST00000614197	WBP2	Q969T9	261 aa		11.47	□□□□□ -0.57
NPIPB4-222	ENST00000614197	INTS2	Q9H0H0	1204 aa	Known RBP	11.47	□□□□□ -0.57
NPIPB4-222	ENST00000614197	RWDD2A	Q9UIY3	292 aa		11.47	□□□□□ -0.57
NPIPB4-222	ENST00000614197	TYW5	A2RUC4	315 aa	Known RBP	11.46	□□□□□ -0.57
NPIPB4-222	ENST00000614197	GFRA2	O00451	464 aa		11.46	□□□□□ -0.57
NPIPB4-222	ENST00000614197	KHNYN	O15037	678 aa	Known RBP	11.46	□□□□□ -0.57
NPIPB4-222	ENST00000614197	SYNCRIP	O60506	623 aa	Known RBP	11.46	□□□□□ -0.57
NPIPB4-222	ENST00000614197	ZNF217	O75362	1048 aa		11.46	□□□□□ -0.57
NPIPB4-222	ENST00000614197	TGM1	P22735	817 aa		11.46	□□□□□ -0.57
NPIPB4-222	ENST00000614197	BRD2	P25440	801 aa	Known RBP	11.46	□□□□□ -0.57
NPIPB4-222	ENST00000614197	HOXC13	P31276	330 aa		11.46	□□□□□ -0.57
NPIPB4-222	ENST00000614197	WAS	P42768	502 aa		11.46	□□□□□ -0.57
NPIPB4-222	ENST00000614197	ACADSB	P45954	432 aa		11.46	□□□□□ -0.57
NPIPB4-222	ENST00000614197	MTIF2	P46199	727 aa	Known RBP	11.46	□□□□□ -0.57
NPIPB4-222	ENST00000614197	SLC11A2	P49281	568 aa		11.46	□□□□□ -0.57
NPIPB4-222	ENST00000614197	RGS7	P49802	495 aa		11.46	□□□□□ -0.57
NPIPB4-222	ENST00000614197	MARS	P56192	900 aa	Known RBP	11.46	□□□□□ -0.57
NPIPB4-222	ENST00000614197	SF3A2	Q15428	464 aa	Known RBP	11.46	□□□□□ -0.57
NPIPB4-222	ENST00000614197	CCDC6	Q16204	474 aa		11.46	□□□□□ -0.57
NPIPB4-222	ENST00000614197	MPPE1	Q53F39	396 aa		11.46	□□□□□ -0.57
NPIPB4-222	ENST00000614197	TMEM92	Q6UXU6	159 aa		11.46	□□□□□ -0.57
NPIPB4-222	ENST00000614197	SLC36A4	Q6YBV0	504 aa		11.46	□□□□□ -0.57
NPIPB4-222	ENST00000614197		Q6ZNB5	142 aa		11.46	□□□□□ -0.57
NPIPB4-222	ENST00000614197	FMNL3	Q8IVF7	1028 aa		11.46	□□□□□ -0.57
NPIPB4-222	ENST00000614197	UNC45B	Q8IWX7	931 aa		11.46	□□□□□ -0.57
NPIPB4-222	ENST00000614197	SCML4	Q8N228	414 aa		11.46	□□□□□ -0.57
NPIPB4-222	ENST00000614197	PHTF2	Q8N3S3	785 aa		11.46	□□□□□ -0.57
NPIPB4-222	ENST00000614197	CPXM2	Q8N436	756 aa		11.46	□□□□□ -0.57
NPIPB4-222	ENST00000614197	ZNF557	Q8N988	423 aa	Predicted RBP	11.46	□□□□□ -0.57
NPIPB4-222	ENST00000614197	EDEM1	Q92611	657 aa		11.46	□□□□□ -0.57
NPIPB4-222	ENST00000614197	HSFY1	Q96LI6	401 aa		11.46	□□□□□ -0.57
NPIPB4-222	ENST00000614197	DDX50	Q9BQ39	737 aa	Known RBP	11.46	□□□□□ -0.57
NPIPB4-222	ENST00000614197	SLC2A11	Q9BYW1	496 aa		11.46	□□□□□ -0.57
NPIPB4-222	ENST00000614197	DUSP15	Q9H1R2	295 aa	Predicted RBP	11.46	□□□□□ -0.57
NPIPB4-222	ENST00000614197	UBE2T	Q9NPD8	197 aa	Predicted RBP	11.46	□□□□□ -0.57
NPIPB4-222	ENST00000614197	ST7	Q9NRC1	585 aa		11.46	□□□□□ -0.57
NPIPB4-222	ENST00000614197	PLK2	Q9NYY3	685 aa		11.46	□□□□□ -0.57
NPIPB4-222	ENST00000614197	AGO1	Q9UL18	857 aa	Known RBP	11.46	□□□□□ -0.57
NPIPB4-222	ENST00000614197	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	11.46	□□□□□ -0.57
NPIPB4-222	ENST00000614197	STARD13	Q9Y3M8	1113 aa		11.46	□□□□□ -0.57
NPIPB4-222	ENST00000614197	OTOGL	Q3ZCN5	2332 aa		11.46	□□□□□ -0.58
NPIPB4-222	ENST00000614197	GREB1	Q4ZG55	1949 aa		11.45	□□□□□ -0.58
NPIPB4-222	ENST00000614197	ANAPC1	Q9H1A4	1944 aa		11.45	□□□□□ -0.58
NPIPB4-222	ENST00000614197	GPR179	Q6PRD1	2367 aa		11.45	□□□□□ -0.58
NPIPB4-222	ENST00000614197	BCLAF3	A2AJT9	711 aa	Known RBP	11.45	□□□□□ -0.58
NPIPB4-222	ENST00000614197	DCDC2B	A2VCK2	349 aa		11.45	□□□□□ -0.58
NPIPB4-222	ENST00000614197	CAPN9	O14815	690 aa		11.45	□□□□□ -0.58
NPIPB4-222	ENST00000614197	AP5Z1	O43299	807 aa		11.45	□□□□□ -0.58
NPIPB4-222	ENST00000614197	TIMM44	O43615	452 aa		11.45	□□□□□ -0.58
NPIPB4-222	ENST00000614197	GREM1	O60565	184 aa		11.45	□□□□□ -0.58
NPIPB4-222	ENST00000614197	LATS1	O95835	1130 aa		11.45	□□□□□ -0.58
NPIPB4-222	ENST00000614197	BMP6	P22004	513 aa		11.45	□□□□□ -0.58
NPIPB4-222	ENST00000614197	USP8	P40818	1118 aa		11.45	□□□□□ -0.58
NPIPB4-222	ENST00000614197	ZNF132	P52740	706 aa		11.45	□□□□□ -0.58
NPIPB4-222	ENST00000614197	SNX16	P57768	344 aa		11.45	□□□□□ -0.58
NPIPB4-222	ENST00000614197	EIF4H	Q15056	248 aa	Known RBP	11.45	□□□□□ -0.58
NPIPB4-222	ENST00000614197	SPDYC	Q5MJ68	293 aa		11.45	□□□□□ -0.58
NPIPB4-222	ENST00000614197	EGFLAM	Q63HQ2	1017 aa		11.45	□□□□□ -0.58
NPIPB4-222	ENST00000614197	NUGGC	Q68CJ6	796 aa		11.45	□□□□□ -0.58
NPIPB4-222	ENST00000614197	PMS2CL	Q68D20	193 aa		11.45	□□□□□ -0.58
NPIPB4-222	ENST00000614197	RNF43	Q68DV7	783 aa		11.45	□□□□□ -0.58
NPIPB4-222	ENST00000614197	GBP6	Q6ZN66	633 aa		11.45	□□□□□ -0.58
NPIPB4-222	ENST00000614197	ANKS1B	Q7Z6G8	1248 aa		11.45	□□□□□ -0.58
NPIPB4-222	ENST00000614197	SFTPA1	Q8IWL2	248 aa		11.45	□□□□□ -0.58
NPIPB4-222	ENST00000614197	UBR7	Q8N806	425 aa		11.45	□□□□□ -0.58
NPIPB4-222	ENST00000614197	PIGK	Q92643	395 aa		11.45	□□□□□ -0.58
NPIPB4-222	ENST00000614197	FAM149B1	Q96BN6	582 aa		11.45	□□□□□ -0.58
NPIPB4-222	ENST00000614197	TMA16	Q96EY4	203 aa	Known RBP	11.45	□□□□□ -0.58
NPIPB4-222	ENST00000614197	MIS12	Q9H081	205 aa		11.45	□□□□□ -0.58
NPIPB4-222	ENST00000614197	ZDHHC4	Q9NPG8	344 aa		11.45	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms