RNA–Protein interactions for RNA: ENST00000612540.1

PRKN-210, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 603 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-210ENST00000612540 HECTD3Q5T447 861 aa13.38□□□□□ -0.27
PRKN-210ENST00000612540 DAB2IPQ5VWQ8 1189 aa13.38□□□□□ -0.27
PRKN-210ENST00000612540 ANKRD54Q6NXT1 300 aa13.38□□□□□ -0.27
PRKN-210ENST00000612540 PEX26Q7Z412 305 aa13.38□□□□□ -0.27
PRKN-210ENST00000612540 TADA2BQ86TJ2 420 aa13.38□□□□□ -0.27
PRKN-210ENST00000612540 TAC4Q86UU9 113 aa13.38□□□□□ -0.27
PRKN-210ENST00000612540 LEMD2Q8NC56 503 aa13.38□□□□□ -0.27
PRKN-210ENST00000612540 CMASQ8NFW8 434 aaPredicted RBP13.38□□□□□ -0.27
PRKN-210ENST00000612540 FAM172AQ8WUF8 416 aa13.38□□□□□ -0.27
PRKN-210ENST00000612540 RNF34Q969K3 372 aa13.38□□□□□ -0.27
PRKN-210ENST00000612540 CDK5RAP1Q96SZ6 601 aaKnown RBP13.38□□□□□ -0.27
PRKN-210ENST00000612540 SLITRK6Q9H5Y7 841 aa13.38□□□□□ -0.27
PRKN-210ENST00000612540 CCSER2Q9H7U1 834 aa13.38□□□□□ -0.27
PRKN-210ENST00000612540 IL21Q9HBE4 155 aa13.38□□□□□ -0.27
PRKN-210ENST00000612540 OLA1Q9NTK5 396 aaKnown RBP13.38□□□□□ -0.27
PRKN-210ENST00000612540 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.38□□□□□ -0.27
PRKN-210ENST00000612540 RRN3Q9NYV6 651 aa13.38□□□□□ -0.27
PRKN-210ENST00000612540 CLIC5Q9NZA1 410 aa13.38□□□□□ -0.27
PRKN-210ENST00000612540 DNMT3BQ9UBC3 853 aaKnown RBP13.38□□□□□ -0.27
PRKN-210ENST00000612540 AMFRQ9UKV5 643 aa13.38□□□□□ -0.27
PRKN-210ENST00000612540 HCN4Q9Y3Q4 1203 aa13.38□□□□□ -0.27
PRKN-210ENST00000612540 C5orf42Q9H799 3197 aa13.37□□□□□ -0.27
PRKN-210ENST00000612540 MSI1O43347 362 aaKnown RBP13.37□□□□□ -0.27
PRKN-210ENST00000612540 NCK2O43639 380 aa13.37□□□□□ -0.27
PRKN-210ENST00000612540 TRUB2O95900 331 aaKnown RBP13.37□□□□□ -0.27
PRKN-210ENST00000612540 POU2F2P09086 479 aa13.37□□□□□ -0.27
PRKN-210ENST00000612540 COMTP21964 271 aa13.37□□□□□ -0.27
PRKN-210ENST00000612540 GBP1P32455 592 aa13.37□□□□□ -0.27
PRKN-210ENST00000612540 MAN1A1P33908 653 aa13.37□□□□□ -0.27
PRKN-210ENST00000612540 RDXP35241 583 aaKnown RBP13.37□□□□□ -0.27
PRKN-210ENST00000612540 LTBRP36941 435 aa13.37□□□□□ -0.27
PRKN-210ENST00000612540 ADAM15Q13444 863 aa13.37□□□□□ -0.27
PRKN-210ENST00000612540 CTC1Q2NKJ3 1217 aa13.37□□□□□ -0.27
PRKN-210ENST00000612540 ZFYVE27Q5T4F4 411 aa13.37□□□□□ -0.27
PRKN-210ENST00000612540 SH3PXD2AQ5TCZ1 1133 aa13.37□□□□□ -0.27
PRKN-210ENST00000612540 CC2D1AQ6P1N0 951 aaPredicted RBP13.37□□□□□ -0.27
PRKN-210ENST00000612540 SCYL2Q6P3W7 929 aa13.37□□□□□ -0.27
PRKN-210ENST00000612540 GAREM2Q75VX8 874 aa13.37□□□□□ -0.27
PRKN-210ENST00000612540 SND1Q7KZF4 910 aaKnown RBP eCLIP13.37□□□□□ -0.27
PRKN-210ENST00000612540 BEND5Q7L4P6 421 aa13.37□□□□□ -0.27
PRKN-210ENST00000612540 MIB1Q86YT6 1006 aa13.37□□□□□ -0.27
PRKN-210ENST00000612540 NIPA2Q8N8Q9 360 aa13.37□□□□□ -0.27
PRKN-210ENST00000612540 LRRC57Q8N9N7 239 aa13.37□□□□□ -0.27
PRKN-210ENST00000612540 SHKBP1Q8TBC3 707 aa13.37□□□□□ -0.27
PRKN-210ENST00000612540 ING5Q8WYH8 240 aa13.37□□□□□ -0.27
PRKN-210ENST00000612540 TCEAL4Q96EI5 215 aa13.37□□□□□ -0.27
PRKN-210ENST00000612540 NPY6RQ99463 290 aa13.37□□□□□ -0.27
PRKN-210ENST00000612540 LRRC3Q9BY71 257 aa13.37□□□□□ -0.27
PRKN-210ENST00000612540 SMOC2Q9H3U7 446 aa13.37□□□□□ -0.27
PRKN-210ENST00000612540 MARCH2Q9P0N8 246 aa13.37□□□□□ -0.27
PRKN-210ENST00000612540 SFMBT1Q9UHJ3 866 aa13.37□□□□□ -0.27
PRKN-210ENST00000612540 MRPS23Q9Y3D9 190 aaKnown RBP13.37□□□□□ -0.27
PRKN-210ENST00000612540 ARIH1Q9Y4X5 557 aaPredicted RBP13.37□□□□□ -0.27
PRKN-210ENST00000612540 ALG6Q9Y672 507 aa13.37□□□□□ -0.27
PRKN-210ENST00000612540 SLC12A8A0AV02 714 aa13.36□□□□□ -0.27
PRKN-210ENST00000612540 C2orf78A6NCI8 922 aa13.36□□□□□ -0.27
PRKN-210ENST00000612540 ZNF197O14709 1029 aa13.36□□□□□ -0.27
PRKN-210ENST00000612540 PRPSAP2O60256 369 aa13.36□□□□□ -0.27
PRKN-210ENST00000612540 TBX10O75333 385 aa13.36□□□□□ -0.27
PRKN-210ENST00000612540 LRCH4O75427 683 aa13.36□□□□□ -0.27
PRKN-210ENST00000612540 TBX18O95935 607 aa13.36□□□□□ -0.27
PRKN-210ENST00000612540 HMBSP08397 361 aa13.36□□□□□ -0.27
PRKN-210ENST00000612540 MBL2P11226 248 aaPredicted RBP13.36□□□□□ -0.27
PRKN-210ENST00000612540 HOXB8P17481 243 aaPredicted RBP13.36□□□□□ -0.27
PRKN-210ENST00000612540 ATP5C1P36542 298 aaKnown RBP13.36□□□□□ -0.27
PRKN-210ENST00000612540 SLC1A1P43005 524 aa13.36□□□□□ -0.27
PRKN-210ENST00000612540 EPHA5P54756 1037 aa13.36□□□□□ -0.27
PRKN-210ENST00000612540 TEAD2Q15562 447 aa13.36□□□□□ -0.27
PRKN-210ENST00000612540 CLUL1Q15846 466 aa13.36□□□□□ -0.27
PRKN-210ENST00000612540 HADHQ16836 314 aaKnown RBP13.36□□□□□ -0.27
PRKN-210ENST00000612540 RAB6CQ53S08 254 aa13.36□□□□□ -0.27
PRKN-210ENST00000612540 GPR158Q5T848 1215 aa13.36□□□□□ -0.27
PRKN-210ENST00000612540 OTUD1Q5VV17 481 aaPredicted RBP13.36□□□□□ -0.27
PRKN-210ENST00000612540 TXNDC8Q6A555 127 aa13.36□□□□□ -0.27
PRKN-210ENST00000612540 MSANTD2Q6P1R3 559 aa13.36□□□□□ -0.27
PRKN-210ENST00000612540 SYT10Q6XYQ8 523 aa13.36□□□□□ -0.27
PRKN-210ENST00000612540 TMEM184AQ6ZMB5 413 aa13.36□□□□□ -0.27
PRKN-210ENST00000612540 TMEM150AQ86TG1 271 aa13.36□□□□□ -0.27
PRKN-210ENST00000612540 FAM131BQ86XD5 332 aa13.36□□□□□ -0.27
PRKN-210ENST00000612540 TTC16Q8NEE8 873 aa13.36□□□□□ -0.27
PRKN-210ENST00000612540 ZNF592Q92610 1267 aa13.36□□□□□ -0.27
PRKN-210ENST00000612540 SERPINB11Q96P15 392 aa13.36□□□□□ -0.27
PRKN-210ENST00000612540 WDR24Q96S15 920 aa13.36□□□□□ -0.27
PRKN-210ENST00000612540 RAB6CQ9H0N0 254 aa13.36□□□□□ -0.27
PRKN-210ENST00000612540 ZWILCHQ9H900 591 aa13.36□□□□□ -0.27
PRKN-210ENST00000612540 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.36□□□□□ -0.27
PRKN-210ENST00000612540 PCSK1NQ9UHG2 260 aa13.36□□□□□ -0.27
PRKN-210ENST00000612540 DNAI1Q9UI46 699 aa13.36□□□□□ -0.27
PRKN-210ENST00000612540 PACSIN2Q9UNF0 486 aaPredicted RBP13.36□□□□□ -0.27
PRKN-210ENST00000612540 HELZP42694 1942 aaKnown RBP13.36□□□□□ -0.27
PRKN-210ENST00000612540 TRAV19A0A0A6YYK7 116 aa13.35□□□□□ -0.27
PRKN-210ENST00000612540 KIF2AO00139 706 aaPredicted RBP13.35□□□□□ -0.27
PRKN-210ENST00000612540 IRAK2O43187 625 aa13.35□□□□□ -0.27
PRKN-210ENST00000612540 COCHO43405 550 aa13.35□□□□□ -0.27
PRKN-210ENST00000612540 F9P00740 461 aa13.35□□□□□ -0.27
PRKN-210ENST00000612540 CKMP06732 381 aa13.35□□□□□ -0.27
PRKN-210ENST00000612540 MIPP30301 263 aa13.35□□□□□ -0.27
PRKN-210ENST00000612540 CCR2P41597 374 aa13.35□□□□□ -0.27
PRKN-210ENST00000612540 TUBP50607 506 aa13.35□□□□□ -0.27
PRKN-210ENST00000612540 ATXN1P54253 815 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms