RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 SP9P0CG40 484 aa18.88■□□□□ 0.61
SEMA3B-211ENST00000612509 SOX5P35711 763 aa18.88■□□□□ 0.61
SEMA3B-211ENST00000612509 CCR3P51677 355 aa18.88■□□□□ 0.61
SEMA3B-211ENST00000612509 TRIP4Q15650 581 aaPredicted RBP18.88■□□□□ 0.61
SEMA3B-211ENST00000612509 ANO4Q32M45 955 aa18.88■□□□□ 0.61
SEMA3B-211ENST00000612509 FBXO43Q4G163 708 aa18.88■□□□□ 0.61
SEMA3B-211ENST00000612509 PTPN20Q4JDL3 420 aa18.88■□□□□ 0.61
SEMA3B-211ENST00000612509 MAMSTRQ6ZN01 415 aa18.88■□□□□ 0.61
SEMA3B-211ENST00000612509 TMEM25Q86YD3 366 aa18.88■□□□□ 0.61
SEMA3B-211ENST00000612509 ETFBKMTQ8IXQ9 262 aa18.88■□□□□ 0.61
SEMA3B-211ENST00000612509 SPEM1Q8N4L4 309 aa18.88■□□□□ 0.61
SEMA3B-211ENST00000612509 IPO4Q8TEX9 1081 aaKnown RBP18.88■□□□□ 0.61
SEMA3B-211ENST00000612509 DDX1Q92499 740 aaKnown RBP18.88■□□□□ 0.61
SEMA3B-211ENST00000612509 PIWIL1Q96J94 861 aaKnown RBP18.88■□□□□ 0.61
SEMA3B-211ENST00000612509 PPP1R13BQ96KQ4 1090 aa18.88■□□□□ 0.61
SEMA3B-211ENST00000612509 TRIM62Q9BVG3 475 aa18.88■□□□□ 0.61
SEMA3B-211ENST00000612509 PDCL3Q9H2J4 239 aa18.88■□□□□ 0.61
SEMA3B-211ENST00000612509 MARK1Q9P0L2 795 aa18.88■□□□□ 0.61
SEMA3B-211ENST00000612509 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.87■□□□□ 0.61
SEMA3B-211ENST00000612509 FYNP06241 537 aa18.87■□□□□ 0.61
SEMA3B-211ENST00000612509 NCAM1P13591 858 aa18.87■□□□□ 0.61
SEMA3B-211ENST00000612509 CDH5P33151 784 aaPredicted RBP18.87■□□□□ 0.61
SEMA3B-211ENST00000612509 SLC6A11P48066 632 aa18.87■□□□□ 0.61
SEMA3B-211ENST00000612509 SATB1Q01826 763 aa18.87■□□□□ 0.61
SEMA3B-211ENST00000612509 KDSRQ06136 332 aa18.87■□□□□ 0.61
SEMA3B-211ENST00000612509 PKN3Q6P5Z2 889 aa18.87■□□□□ 0.61
SEMA3B-211ENST00000612509 TPGS1Q6ZTW0 290 aa18.87■□□□□ 0.61
SEMA3B-211ENST00000612509 LUZP1Q86V48 1076 aa18.87■□□□□ 0.61
SEMA3B-211ENST00000612509 DENND1CQ8IV53 801 aa18.87■□□□□ 0.61
SEMA3B-211ENST00000612509 DQX1Q8TE96 717 aaKnown RBP18.87■□□□□ 0.61
SEMA3B-211ENST00000612509 PHOX2BQ99453 314 aa18.87■□□□□ 0.61
SEMA3B-211ENST00000612509 AGO1Q9UL18 857 aaKnown RBP18.87■□□□□ 0.61
SEMA3B-211ENST00000612509 NEDD8-MDP1E9PL57 170 aa18.86■□□□□ 0.61
SEMA3B-211ENST00000612509 TEX33O43247 280 aa18.86■□□□□ 0.61
SEMA3B-211ENST00000612509 ERBB2P04626 1255 aa18.86■□□□□ 0.61
SEMA3B-211ENST00000612509 TDGF1P13385 188 aa18.86■□□□□ 0.61
SEMA3B-211ENST00000612509 STAT1P42224 750 aa18.86■□□□□ 0.61
SEMA3B-211ENST00000612509 CSTF1Q05048 431 aaKnown RBP18.86■□□□□ 0.61
SEMA3B-211ENST00000612509 ZNF528Q3MIS6 628 aa18.86■□□□□ 0.61
SEMA3B-211ENST00000612509 FILIP1LQ4L180 1135 aa18.86■□□□□ 0.61
SEMA3B-211ENST00000612509 TSSK4Q6SA08 328 aa18.86■□□□□ 0.61
SEMA3B-211ENST00000612509 FAM183BPQ6ZVS7 135 aa18.86■□□□□ 0.61
SEMA3B-211ENST00000612509 BEND5Q7L4P6 421 aa18.86■□□□□ 0.61
SEMA3B-211ENST00000612509 PHTF2Q8N3S3 785 aa18.86■□□□□ 0.61
SEMA3B-211ENST00000612509 TMEM35BQ8NCS4 154 aa18.86■□□□□ 0.61
SEMA3B-211ENST00000612509 SLC20A1Q8WUM9 679 aa18.86■□□□□ 0.61
SEMA3B-211ENST00000612509 PNKPQ96T60 521 aa18.86■□□□□ 0.61
SEMA3B-211ENST00000612509 BBS2Q9BXC9 721 aa18.86■□□□□ 0.61
SEMA3B-211ENST00000612509 POPDC2Q9HBU9 364 aa18.86■□□□□ 0.61
SEMA3B-211ENST00000612509 RTN4Q9NQC3 1192 aaKnown RBP18.86■□□□□ 0.61
SEMA3B-211ENST00000612509 NOCTQ9UK39 431 aaKnown RBP18.86■□□□□ 0.61
SEMA3B-211ENST00000612509 NAALADL1Q9UQQ1 740 aa18.86■□□□□ 0.61
SEMA3B-211ENST00000612509 ATG2BQ96BY7 2078 aa18.86■□□□□ 0.61
SEMA3B-211ENST00000612509 A0A1B0GTH6 734 aa18.85■□□□□ 0.61
SEMA3B-211ENST00000612509 CAPN9O14815 690 aa18.85■□□□□ 0.61
SEMA3B-211ENST00000612509 CACNG3O60359 315 aa18.85■□□□□ 0.61
SEMA3B-211ENST00000612509 TULP3O75386 442 aa18.85■□□□□ 0.61
SEMA3B-211ENST00000612509 KAT7O95251 611 aa18.85■□□□□ 0.61
SEMA3B-211ENST00000612509 PAPSS2O95340 614 aaPredicted RBP18.85■□□□□ 0.61
SEMA3B-211ENST00000612509 LSM8O95777 96 aaKnown RBP18.85■□□□□ 0.61
SEMA3B-211ENST00000612509 CAVIN2O95810 425 aa18.85■□□□□ 0.61
SEMA3B-211ENST00000612509 IGLV3-27P01718 113 aa18.85■□□□□ 0.61
SEMA3B-211ENST00000612509 APODP05090 189 aa18.85■□□□□ 0.61
SEMA3B-211ENST00000612509 MMEP08473 750 aa18.85■□□□□ 0.61
SEMA3B-211ENST00000612509 TYRP14679 529 aa18.85■□□□□ 0.61
SEMA3B-211ENST00000612509 NBL1P41271 181 aa18.85■□□□□ 0.61
SEMA3B-211ENST00000612509 CXCL12P48061 93 aa18.85■□□□□ 0.61
SEMA3B-211ENST00000612509 HARS2P49590 506 aaKnown RBP18.85■□□□□ 0.61
SEMA3B-211ENST00000612509 TPM4P67936 248 aa18.85■□□□□ 0.61
SEMA3B-211ENST00000612509 MESP2Q0VG99 397 aa18.85■□□□□ 0.61
SEMA3B-211ENST00000612509 NNTQ13423 1086 aa18.85■□□□□ 0.61
SEMA3B-211ENST00000612509 PPP2R5DQ14738 602 aa18.85■□□□□ 0.61
SEMA3B-211ENST00000612509 OLFML1Q6UWY5 402 aa18.85■□□□□ 0.61
SEMA3B-211ENST00000612509 TAC4Q86UU9 113 aa18.85■□□□□ 0.61
SEMA3B-211ENST00000612509 ZNF677Q86XU0 584 aa18.85■□□□□ 0.61
SEMA3B-211ENST00000612509 FAM217AQ8IXS0 508 aa18.85■□□□□ 0.61
SEMA3B-211ENST00000612509 CPXM2Q8N436 756 aa18.85■□□□□ 0.61
SEMA3B-211ENST00000612509 NAT16Q8N8M0 369 aa18.85■□□□□ 0.61
SEMA3B-211ENST00000612509 SERPINB11Q96P15 392 aa18.85■□□□□ 0.61
SEMA3B-211ENST00000612509 SYNCQ9H7C4 482 aa18.85■□□□□ 0.61
SEMA3B-211ENST00000612509 ARHGEF4Q9NR80 690 aa18.85■□□□□ 0.61
SEMA3B-211ENST00000612509 ASNSD1Q9NWL6 643 aa18.85■□□□□ 0.61
SEMA3B-211ENST00000612509 C2orf42Q9NWW7 574 aa18.85■□□□□ 0.61
SEMA3B-211ENST00000612509 CHURC1-FNTBB4DL54 471 aa18.84■□□□□ 0.61
SEMA3B-211ENST00000612509 LATS1O95835 1130 aa18.84■□□□□ 0.61
SEMA3B-211ENST00000612509 CHKAP35790 457 aa18.84■□□□□ 0.61
SEMA3B-211ENST00000612509 SNX16P57768 344 aa18.84■□□□□ 0.61
SEMA3B-211ENST00000612509 NOMO3P69849 1222 aa18.84■□□□□ 0.61
SEMA3B-211ENST00000612509 TAF5Q15542 800 aa18.84■□□□□ 0.61
SEMA3B-211ENST00000612509 NUGGCQ68CJ6 796 aa18.84■□□□□ 0.61
SEMA3B-211ENST00000612509 OR6B2Q6IFH4 312 aa18.84■□□□□ 0.61
SEMA3B-211ENST00000612509 ZC3H14Q6PJT7 736 aaKnown RBP18.84■□□□□ 0.61
SEMA3B-211ENST00000612509 TOGARAM2Q6ZUX3 1019 aa18.84■□□□□ 0.61
SEMA3B-211ENST00000612509 SFTPA1Q8IWL2 248 aa18.84■□□□□ 0.61
SEMA3B-211ENST00000612509 RPLP0P6Q8NHW5 317 aa18.84■□□□□ 0.61
SEMA3B-211ENST00000612509 BHMTQ93088 406 aa18.84■□□□□ 0.61
SEMA3B-211ENST00000612509 P2RY11Q96G91 374 aa18.84■□□□□ 0.61
SEMA3B-211ENST00000612509 XPO6Q96QU8 1125 aaKnown RBP18.84■□□□□ 0.61
SEMA3B-211ENST00000612509 DNAJC17Q9NVM6 304 aaKnown RBP18.84■□□□□ 0.61
SEMA3B-211ENST00000612509 WDR35Q9P2L0 1181 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms