RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 CISHQ9NSE2 258 aa18.68■□□□□ 0.58
SSBP1-215ENST00000612337 RAB20Q9NX57 234 aa18.68■□□□□ 0.58
SSBP1-215ENST00000612337 FBXO10Q9UK96 956 aa18.68■□□□□ 0.58
SSBP1-215ENST00000612337 CEP192Q8TEP8 1941 aa18.68■□□□□ 0.58
SSBP1-215ENST00000612337 WDFY3Q8IZQ1 3526 aa18.67■□□□□ 0.58
SSBP1-215ENST00000612337 CETN3O15182 167 aa18.67■□□□□ 0.58
SSBP1-215ENST00000612337 ZNF217O75362 1048 aa18.67■□□□□ 0.58
SSBP1-215ENST00000612337 KLKB1P03952 638 aa18.67■□□□□ 0.58
SSBP1-215ENST00000612337 EPB41P11171 864 aaKnown RBP18.67■□□□□ 0.58
SSBP1-215ENST00000612337 CEACAM1P13688 526 aa18.67■□□□□ 0.58
SSBP1-215ENST00000612337 NDUFV2P19404 249 aa18.67■□□□□ 0.58
SSBP1-215ENST00000612337 ITPKAP23677 461 aa18.67■□□□□ 0.58
SSBP1-215ENST00000612337 COG7P83436 770 aa18.67■□□□□ 0.58
SSBP1-215ENST00000612337 C1QBPQ07021 282 aaKnown RBP18.67■□□□□ 0.58
SSBP1-215ENST00000612337 SMYD4Q8IYR2 804 aaPredicted RBP18.67■□□□□ 0.58
SSBP1-215ENST00000612337 BHMTQ93088 406 aa18.67■□□□□ 0.58
SSBP1-215ENST00000612337 EEF2KMTQ96G04 330 aa18.67■□□□□ 0.58
SSBP1-215ENST00000612337 TMEM176AQ96HP8 235 aa18.67■□□□□ 0.58
SSBP1-215ENST00000612337 DCLK3Q9C098 648 aa18.67■□□□□ 0.58
SSBP1-215ENST00000612337 IGHV1OR15-9A0A0B4J2B8 117 aa18.66■□□□□ 0.58
SSBP1-215ENST00000612337 GFRA2O00451 464 aa18.66■□□□□ 0.58
SSBP1-215ENST00000612337 ENGP17813 658 aa18.66■□□□□ 0.58
SSBP1-215ENST00000612337 CHKAP35790 457 aa18.66■□□□□ 0.58
SSBP1-215ENST00000612337 RAD23BP54727 409 aa18.66■□□□□ 0.58
SSBP1-215ENST00000612337 ZNF252P-AS1Q0IIN9 211 aa18.66■□□□□ 0.58
SSBP1-215ENST00000612337 EFEMP1Q12805 493 aa18.66■□□□□ 0.58
SSBP1-215ENST00000612337 UAP1L1Q3KQV9 507 aa18.66■□□□□ 0.58
SSBP1-215ENST00000612337 RAB41Q5JT25 222 aa18.66■□□□□ 0.58
SSBP1-215ENST00000612337 ARHGAP17Q68EM7 881 aa18.66■□□□□ 0.58
SSBP1-215ENST00000612337 KIAA1211LQ6NV74 962 aa18.66■□□□□ 0.58
SSBP1-215ENST00000612337 ARHGAP18Q8N392 663 aa18.66■□□□□ 0.58
SSBP1-215ENST00000612337 CEP76Q8TAP6 659 aa18.66■□□□□ 0.58
SSBP1-215ENST00000612337 P2RY11Q96G91 374 aa18.66■□□□□ 0.58
SSBP1-215ENST00000612337 ARID3AQ99856 593 aa18.66■□□□□ 0.58
SSBP1-215ENST00000612337 PLK2Q9NYY3 685 aa18.66■□□□□ 0.58
SSBP1-215ENST00000612337 RASAL2Q9UJF2 1139 aa18.66■□□□□ 0.58
SSBP1-215ENST00000612337 ATXN2Q99700 1313 aaKnown RBP18.66■□□□□ 0.58
SSBP1-215ENST00000612337 CHD6Q8TD26 2715 aa18.65■□□□□ 0.58
SSBP1-215ENST00000612337 PENKP01210 267 aaPredicted RBP18.65■□□□□ 0.58
SSBP1-215ENST00000612337 SLC8A3P57103 927 aa18.65■□□□□ 0.58
SSBP1-215ENST00000612337 PNOCQ13519 176 aa18.65■□□□□ 0.58
SSBP1-215ENST00000612337 DUOXA1Q1HG43 343 aa18.65■□□□□ 0.58
SSBP1-215ENST00000612337 FYB2Q5VWT5 728 aa18.65■□□□□ 0.58
SSBP1-215ENST00000612337 PIGZQ86VD9 579 aa18.65■□□□□ 0.58
SSBP1-215ENST00000612337 ANKRD52Q8NB46 1076 aa18.65■□□□□ 0.58
SSBP1-215ENST00000612337 TATDN2Q93075 761 aa18.65■□□□□ 0.58
SSBP1-215ENST00000612337 GDPD2Q9HCC8 539 aa18.65■□□□□ 0.58
SSBP1-215ENST00000612337 RMND1Q9NWS8 449 aa18.65■□□□□ 0.58
SSBP1-215ENST00000612337 CACNA2D2Q9NY47 1150 aa18.65■□□□□ 0.58
SSBP1-215ENST00000612337 SLC6A14Q9UN76 642 aa18.65■□□□□ 0.58
SSBP1-215ENST00000612337 SLC27A6Q9Y2P4 619 aa18.65■□□□□ 0.58
SSBP1-215ENST00000612337 RAD54BQ9Y620 910 aa18.65■□□□□ 0.58
SSBP1-215ENST00000612337 SLC16A3O15427 465 aaKnown RBP18.64■□□□□ 0.57
SSBP1-215ENST00000612337 CORO1AP31146 461 aaKnown RBP18.64■□□□□ 0.57
SSBP1-215ENST00000612337 PRCPP42785 496 aa18.64■□□□□ 0.57
SSBP1-215ENST00000612337 MAPK8P45983 427 aa18.64■□□□□ 0.57
SSBP1-215ENST00000612337 YWHAGP61981 247 aaKnown RBP eCLIP18.64■□□□□ 0.57
SSBP1-215ENST00000612337 ZNF33AQ06730 810 aa18.64■□□□□ 0.57
SSBP1-215ENST00000612337 COBLL1Q53SF7 1204 aa18.64■□□□□ 0.57
SSBP1-215ENST00000612337 RABEPKQ7Z6M1 372 aa18.64■□□□□ 0.57
SSBP1-215ENST00000612337 ZC3H3Q8IXZ2 948 aaKnown RBP18.64■□□□□ 0.57
SSBP1-215ENST00000612337 DEFB119Q8N690 84 aa18.64■□□□□ 0.57
SSBP1-215ENST00000612337 MARCH2Q9P0N8 246 aa18.64■□□□□ 0.57
SSBP1-215ENST00000612337 AGO1Q9UL18 857 aaKnown RBP18.64■□□□□ 0.57
SSBP1-215ENST00000612337 CYP8B1Q9UNU6 501 aa18.64■□□□□ 0.57
SSBP1-215ENST00000612337 COQ4Q9Y3A0 265 aa18.64■□□□□ 0.57
SSBP1-215ENST00000612337 PCNX2A6NKB5 2137 aa18.64■□□□□ 0.57
SSBP1-215ENST00000612337 NPC1O15118 1278 aa18.63■□□□□ 0.57
SSBP1-215ENST00000612337 CFIP05156 583 aa18.63■□□□□ 0.57
SSBP1-215ENST00000612337 HMBSP08397 361 aa18.63■□□□□ 0.57
SSBP1-215ENST00000612337 SERPINF2P08697 491 aa18.63■□□□□ 0.57
SSBP1-215ENST00000612337 MFAP3P55082 362 aa18.63■□□□□ 0.57
SSBP1-215ENST00000612337 CBWD6Q4V339 395 aa18.63■□□□□ 0.57
SSBP1-215ENST00000612337 CBWD3Q5JTY5 395 aa18.63■□□□□ 0.57
SSBP1-215ENST00000612337 CBWD5Q5RIA9 395 aa18.63■□□□□ 0.57
SSBP1-215ENST00000612337 ZNF658Q5TYW1 1059 aaPredicted RBP18.63■□□□□ 0.57
SSBP1-215ENST00000612337 TCERG1LQ5VWI1 586 aa18.63■□□□□ 0.57
SSBP1-215ENST00000612337 PM20D1Q6GTS8 502 aa18.63■□□□□ 0.57
SSBP1-215ENST00000612337 RSRC2Q7L4I2 434 aaKnown RBP18.63■□□□□ 0.57
SSBP1-215ENST00000612337 SLC41A1Q8IVJ1 513 aa18.63■□□□□ 0.57
SSBP1-215ENST00000612337 DEFB124Q8NES8 71 aa18.63■□□□□ 0.57
SSBP1-215ENST00000612337 ERLEC1Q96DZ1 483 aa18.63■□□□□ 0.57
SSBP1-215ENST00000612337 MRGPRX1Q96LB2 322 aa18.63■□□□□ 0.57
SSBP1-215ENST00000612337 TSG101Q99816 390 aa18.63■□□□□ 0.57
SSBP1-215ENST00000612337 CAPN10Q9HC96 672 aa18.63■□□□□ 0.57
SSBP1-215ENST00000612337 STRIP2Q9ULQ0 834 aa18.63■□□□□ 0.57
SSBP1-215ENST00000612337 STON1Q9Y6Q2 735 aa18.63■□□□□ 0.57
SSBP1-215ENST00000612337 CACNA1EQ15878 2313 aa18.63■□□□□ 0.57
SSBP1-215ENST00000612337 ZZEF1O43149 2961 aa18.62■□□□□ 0.57
SSBP1-215ENST00000612337 WASH3PC4AMC7 463 aa18.62■□□□□ 0.57
SSBP1-215ENST00000612337 XPO1O14980 1071 aaKnown RBP18.62■□□□□ 0.57
SSBP1-215ENST00000612337 ZBED1O96006 694 aa18.62■□□□□ 0.57
SSBP1-215ENST00000612337 CYBBP04839 570 aa18.62■□□□□ 0.57
SSBP1-215ENST00000612337 TKTL1P51854 596 aa18.62■□□□□ 0.57
SSBP1-215ENST00000612337 ZNF132P52740 706 aa18.62■□□□□ 0.57
SSBP1-215ENST00000612337 ATXN3P54252 364 aaPredicted RBP18.62■□□□□ 0.57
SSBP1-215ENST00000612337 FKBP3Q00688 224 aaKnown RBP18.62■□□□□ 0.57
SSBP1-215ENST00000612337 GFPT1Q06210 699 aaPredicted RBP18.62■□□□□ 0.57
SSBP1-215ENST00000612337 CUL2Q13617 745 aa18.62■□□□□ 0.57
SSBP1-215ENST00000612337 STARD3Q14849 445 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms