RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 FAM170AA1A519 330 aa27.18■■□□□ 1.94
VEGFA-226ENST00000611736 NCAM1P13591 858 aa27.18■■□□□ 1.94
VEGFA-226ENST00000611736 FILIP1LQ4L180 1135 aa27.18■■□□□ 1.94
VEGFA-226ENST00000611736 TPGS1Q6ZTW0 290 aa27.18■■□□□ 1.94
VEGFA-226ENST00000611736 ALYREFQ86V81 257 aaKnown RBP27.18■■□□□ 1.94
VEGFA-226ENST00000611736 DENND1CQ8IV53 801 aa27.18■■□□□ 1.94
VEGFA-226ENST00000611736 SYNPOQ8N3V7 929 aa27.18■■□□□ 1.94
VEGFA-226ENST00000611736 NAT16Q8N8M0 369 aa27.18■■□□□ 1.94
VEGFA-226ENST00000611736 EPS8L1Q8TE68 723 aa27.18■■□□□ 1.94
VEGFA-226ENST00000611736 DDX1Q92499 740 aaKnown RBP27.18■■□□□ 1.94
VEGFA-226ENST00000611736 SYNCQ9H7C4 482 aa27.18■■□□□ 1.94
VEGFA-226ENST00000611736 ZNF510Q9Y2H8 683 aa27.18■■□□□ 1.94
VEGFA-226ENST00000611736 HBS1LQ9Y450 684 aaKnown RBP27.18■■□□□ 1.94
VEGFA-226ENST00000611736 MYO15AQ9UKN7 3530 aa27.17■■□□□ 1.94
VEGFA-226ENST00000611736 HOXC11O43248 304 aaPredicted RBP27.17■■□□□ 1.94
VEGFA-226ENST00000611736 FYNP06241 537 aa27.17■■□□□ 1.94
VEGFA-226ENST00000611736 STAT1P42224 750 aa27.17■■□□□ 1.94
VEGFA-226ENST00000611736 TPM4P67936 248 aa27.17■■□□□ 1.94
VEGFA-226ENST00000611736 CSTF1Q05048 431 aaKnown RBP27.17■■□□□ 1.94
VEGFA-226ENST00000611736 EZH1Q92800 747 aaPredicted RBP27.17■■□□□ 1.94
VEGFA-226ENST00000611736 PIWIL1Q96J94 861 aaKnown RBP27.17■■□□□ 1.94
VEGFA-226ENST00000611736 AGO1Q9UL18 857 aaKnown RBP27.17■■□□□ 1.94
VEGFA-226ENST00000611736 NAALADL1Q9UQQ1 740 aa27.17■■□□□ 1.94
VEGFA-226ENST00000611736 NEDD8-MDP1E9PL57 170 aa27.16■■□□□ 1.94
VEGFA-226ENST00000611736 RNF40O75150 1001 aa27.16■■□□□ 1.94
VEGFA-226ENST00000611736 ERBB2P04626 1255 aa27.16■■□□□ 1.94
VEGFA-226ENST00000611736 MMEP08473 750 aa27.16■■□□□ 1.94
VEGFA-226ENST00000611736 SP9P0CG40 484 aa27.16■■□□□ 1.94
VEGFA-226ENST00000611736 KDSRQ06136 332 aa27.16■■□□□ 1.94
VEGFA-226ENST00000611736 TRIP4Q15650 581 aaPredicted RBP27.16■■□□□ 1.94
VEGFA-226ENST00000611736 PTPN20Q4JDL3 420 aa27.16■■□□□ 1.94
VEGFA-226ENST00000611736 TSSK4Q6SA08 328 aa27.16■■□□□ 1.94
VEGFA-226ENST00000611736 SPEM1Q8N4L4 309 aa27.16■■□□□ 1.94
VEGFA-226ENST00000611736 TMEM35BQ8NCS4 154 aa27.16■■□□□ 1.94
VEGFA-226ENST00000611736 SLC20A1Q8WUM9 679 aa27.16■■□□□ 1.94
VEGFA-226ENST00000611736 BHMTQ93088 406 aa27.16■■□□□ 1.94
VEGFA-226ENST00000611736 BBS2Q9BXC9 721 aa27.16■■□□□ 1.94
VEGFA-226ENST00000611736 PIEZO1Q92508 2521 aa27.16■■□□□ 1.94
VEGFA-226ENST00000611736 DMDP11532 3685 aa27.15■■□□□ 1.94
VEGFA-226ENST00000611736 CAPN9O14815 690 aa27.15■■□□□ 1.94
VEGFA-226ENST00000611736 CAVIN2O95810 425 aa27.15■■□□□ 1.94
VEGFA-226ENST00000611736 SERPINC1P01008 464 aa27.15■■□□□ 1.94
VEGFA-226ENST00000611736 HARS2P49590 506 aaKnown RBP27.15■■□□□ 1.94
VEGFA-226ENST00000611736 MRE11P49959 708 aa27.15■■□□□ 1.94
VEGFA-226ENST00000611736 CCR3P51677 355 aa27.15■■□□□ 1.94
VEGFA-226ENST00000611736 SATB1Q01826 763 aa27.15■■□□□ 1.94
VEGFA-226ENST00000611736 MESP2Q0VG99 397 aa27.15■■□□□ 1.94
VEGFA-226ENST00000611736 TAF5Q15542 800 aa27.15■■□□□ 1.94
VEGFA-226ENST00000611736 OR6B2Q6IFH4 312 aa27.15■■□□□ 1.94
VEGFA-226ENST00000611736 PKN3Q6P5Z2 889 aa27.15■■□□□ 1.94
VEGFA-226ENST00000611736 FAM183BPQ6ZVS7 135 aa27.15■■□□□ 1.94
VEGFA-226ENST00000611736 DQX1Q8TE96 717 aaKnown RBP27.15■■□□□ 1.94
VEGFA-226ENST00000611736 IPO4Q8TEX9 1081 aaKnown RBP27.15■■□□□ 1.94
VEGFA-226ENST00000611736 NAP1L5Q96NT1 182 aaPredicted RBP27.15■■□□□ 1.94
VEGFA-226ENST00000611736 PNKPQ96T60 521 aa27.15■■□□□ 1.94
VEGFA-226ENST00000611736 PHOX2BQ99453 314 aa27.15■■□□□ 1.94
VEGFA-226ENST00000611736 TRIM62Q9BVG3 475 aa27.15■■□□□ 1.94
VEGFA-226ENST00000611736 PRMT8Q9NR22 394 aaPredicted RBP27.15■■□□□ 1.94
VEGFA-226ENST00000611736 NOCTQ9UK39 431 aaKnown RBP27.15■■□□□ 1.94
VEGFA-226ENST00000611736 FBXO4Q9UKT5 387 aa27.15■■□□□ 1.94
VEGFA-226ENST00000611736 A0A1B0GTH6 734 aa27.14■■□□□ 1.94
VEGFA-226ENST00000611736 EIF2DP41214 584 aaKnown RBP27.14■■□□□ 1.94
VEGFA-226ENST00000611736 SNX16P57768 344 aa27.14■■□□□ 1.94
VEGFA-226ENST00000611736 YWHAZP63104 245 aaKnown RBP27.14■■□□□ 1.94
VEGFA-226ENST00000611736 ARID5AQ03989 594 aa27.14■■□□□ 1.94
VEGFA-226ENST00000611736 NFKBIBQ15653 356 aa27.14■■□□□ 1.94
VEGFA-226ENST00000611736 FBXO43Q4G163 708 aa27.14■■□□□ 1.94
VEGFA-226ENST00000611736 SYPL2Q5VXT5 272 aa27.14■■□□□ 1.94
VEGFA-226ENST00000611736 CACNA2D4Q7Z3S7 1137 aa27.14■■□□□ 1.94
VEGFA-226ENST00000611736 SFTPA1Q8IWL2 248 aa27.14■■□□□ 1.94
VEGFA-226ENST00000611736 ETFBKMTQ8IXQ9 262 aa27.14■■□□□ 1.94
VEGFA-226ENST00000611736 ADAM32Q8TC27 787 aa27.14■■□□□ 1.94
VEGFA-226ENST00000611736 POPDC2Q9HBU9 364 aa27.14■■□□□ 1.94
VEGFA-226ENST00000611736 ARHGEF4Q9NR80 690 aa27.14■■□□□ 1.94
VEGFA-226ENST00000611736 C2orf42Q9NWW7 574 aa27.14■■□□□ 1.94
VEGFA-226ENST00000611736 WDR35Q9P2L0 1181 aa27.14■■□□□ 1.94
VEGFA-226ENST00000611736 PALM2-AKAP2B1ALY0 433 aaPredicted RBP27.13■■□□□ 1.93
VEGFA-226ENST00000611736 GOLGA6L19H0YKK7 550 aa27.13■■□□□ 1.93
VEGFA-226ENST00000611736 TULP3O75386 442 aa27.13■■□□□ 1.93
VEGFA-226ENST00000611736 APODP05090 189 aa27.13■■□□□ 1.93
VEGFA-226ENST00000611736 TYRP14679 529 aa27.13■■□□□ 1.93
VEGFA-226ENST00000611736 CDH5P33151 784 aaPredicted RBP27.13■■□□□ 1.93
VEGFA-226ENST00000611736 CXCL12P48061 93 aa27.13■■□□□ 1.93
VEGFA-226ENST00000611736 SEC13P55735 322 aa27.13■■□□□ 1.93
VEGFA-226ENST00000611736 TAC4Q86UU9 113 aa27.13■■□□□ 1.93
VEGFA-226ENST00000611736 PLK2Q9NYY3 685 aa27.13■■□□□ 1.93
VEGFA-226ENST00000611736 MARK1Q9P0L2 795 aa27.13■■□□□ 1.93
VEGFA-226ENST00000611736 KIAA1549LQ6ZVL6 1849 aa27.13■■□□□ 1.93
VEGFA-226ENST00000611736 ZFHX2Q9C0A1 2572 aaPredicted RBP27.12■■□□□ 1.93
VEGFA-226ENST00000611736 GRAP2O75791 330 aa27.12■■□□□ 1.93
VEGFA-226ENST00000611736 KAT7O95251 611 aa27.12■■□□□ 1.93
VEGFA-226ENST00000611736 LSM8O95777 96 aaKnown RBP27.12■■□□□ 1.93
VEGFA-226ENST00000611736 CHKAP35790 457 aa27.12■■□□□ 1.93
VEGFA-226ENST00000611736 TBX4P57082 545 aa27.12■■□□□ 1.93
VEGFA-226ENST00000611736 OLFML1Q6UWY5 402 aa27.12■■□□□ 1.93
VEGFA-226ENST00000611736 MAMSTRQ6ZN01 415 aa27.12■■□□□ 1.93
VEGFA-226ENST00000611736 BEND5Q7L4P6 421 aa27.12■■□□□ 1.93
VEGFA-226ENST00000611736 ZNF677Q86XU0 584 aa27.12■■□□□ 1.93
VEGFA-226ENST00000611736 RPLP0P6Q8NHW5 317 aa27.12■■□□□ 1.93
VEGFA-226ENST00000611736 P2RY11Q96G91 374 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms