RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 F11P03951 625 aa12.04□□□□□ -0.48
CTCFL-221ENST00000608903 CD48P09326 243 aa12.04□□□□□ -0.48
CTCFL-221ENST00000608903 CSH1P0DML2 217 aa12.04□□□□□ -0.48
CTCFL-221ENST00000608903 CSH2P0DML3 217 aa12.04□□□□□ -0.48
CTCFL-221ENST00000608903 RARGP13631 454 aa12.04□□□□□ -0.48
CTCFL-221ENST00000608903 ARSEP51690 589 aa12.04□□□□□ -0.48
CTCFL-221ENST00000608903 EPHB3P54753 998 aa12.04□□□□□ -0.48
CTCFL-221ENST00000608903 NME3Q13232 169 aa12.04□□□□□ -0.48
CTCFL-221ENST00000608903 DUSP6Q16828 381 aa12.04□□□□□ -0.48
CTCFL-221ENST00000608903 ZC3H12AQ5D1E8 599 aaKnown RBP12.04□□□□□ -0.48
CTCFL-221ENST00000608903 PDE12Q6L8Q7 609 aaKnown RBP12.04□□□□□ -0.48
CTCFL-221ENST00000608903 SCYL2Q6P3W7 929 aa12.04□□□□□ -0.48
CTCFL-221ENST00000608903 STRADAQ7RTN6 431 aa12.04□□□□□ -0.48
CTCFL-221ENST00000608903 FAM131BQ86XD5 332 aa12.04□□□□□ -0.48
CTCFL-221ENST00000608903 RHOT1Q8IXI2 618 aa12.04□□□□□ -0.48
CTCFL-221ENST00000608903 TRMT2BQ96GJ1 504 aaKnown RBP12.04□□□□□ -0.48
CTCFL-221ENST00000608903 LMAN2LQ9H0V9 348 aa12.04□□□□□ -0.48
CTCFL-221ENST00000608903 TCRBV7S2A1N4TA0A589 114 aa12.04□□□□□ -0.48
CTCFL-221ENST00000608903 PSTPIP1O43586 416 aa12.04□□□□□ -0.48
CTCFL-221ENST00000608903 ZMYND10O75800 440 aa12.04□□□□□ -0.48
CTCFL-221ENST00000608903 RNF8O76064 485 aa12.04□□□□□ -0.48
CTCFL-221ENST00000608903 RHOXF2BP0C7M4 288 aa12.04□□□□□ -0.48
CTCFL-221ENST00000608903 NRIP1P48552 1158 aa12.04□□□□□ -0.48
CTCFL-221ENST00000608903 ZNF697Q5TEC3 545 aa12.04□□□□□ -0.48
CTCFL-221ENST00000608903 LRRC38Q5VT99 294 aa12.04□□□□□ -0.48
CTCFL-221ENST00000608903 SNX30Q5VWJ9 437 aa12.04□□□□□ -0.48
CTCFL-221ENST00000608903 MSANTD2Q6P1R3 559 aa12.04□□□□□ -0.48
CTCFL-221ENST00000608903 POTEHQ6S545 545 aa12.04□□□□□ -0.48
CTCFL-221ENST00000608903 GAREM2Q75VX8 874 aa12.04□□□□□ -0.48
CTCFL-221ENST00000608903 KATNAL2Q8IYT4 538 aa12.04□□□□□ -0.48
CTCFL-221ENST00000608903 RNF25Q96BH1 459 aaPredicted RBP12.04□□□□□ -0.48
CTCFL-221ENST00000608903 PGAP3Q96FM1 320 aaPredicted RBP12.04□□□□□ -0.48
CTCFL-221ENST00000608903 RHOXF2Q9BQY4 288 aa12.04□□□□□ -0.48
CTCFL-221ENST00000608903 TTYH1Q9H313 450 aaPredicted RBP12.04□□□□□ -0.48
CTCFL-221ENST00000608903 ZNF576Q9H609 170 aa12.04□□□□□ -0.48
CTCFL-221ENST00000608903 LCMT1Q9UIC8 334 aa12.04□□□□□ -0.48
CTCFL-221ENST00000608903 NR2E1Q9Y466 385 aa12.04□□□□□ -0.48
CTCFL-221ENST00000608903 TRANK1O15050 2925 aa12.03□□□□□ -0.48
CTCFL-221ENST00000608903 C2orf78A6NCI8 922 aa12.03□□□□□ -0.48
CTCFL-221ENST00000608903 CEP104O60308 925 aa12.03□□□□□ -0.48
CTCFL-221ENST00000608903 TCP1P17987 556 aaKnown RBP12.03□□□□□ -0.48
CTCFL-221ENST00000608903 CCR2P41597 374 aa12.03□□□□□ -0.48
CTCFL-221ENST00000608903 RWDD2BP57060 319 aa12.03□□□□□ -0.48
CTCFL-221ENST00000608903 MLLT1Q03111 559 aaPredicted RBP12.03□□□□□ -0.48
CTCFL-221ENST00000608903 DEUP1Q05D60 604 aa12.03□□□□□ -0.48
CTCFL-221ENST00000608903 ADCY2Q08462 1091 aa12.03□□□□□ -0.48
CTCFL-221ENST00000608903 ARTNQ5T4W7 220 aa12.03□□□□□ -0.48
CTCFL-221ENST00000608903 MFSD7Q6UXD7 560 aa12.03□□□□□ -0.48
CTCFL-221ENST00000608903 CCDC149Q6ZUS6 474 aa12.03□□□□□ -0.48
CTCFL-221ENST00000608903 PYROXD2Q8N2H3 581 aa12.03□□□□□ -0.48
CTCFL-221ENST00000608903 RASGEF1CQ8N431 466 aa12.03□□□□□ -0.48
CTCFL-221ENST00000608903 C12orf76Q8N812 135 aaPredicted RBP12.03□□□□□ -0.48
CTCFL-221ENST00000608903 CMASQ8NFW8 434 aaPredicted RBP12.03□□□□□ -0.48
CTCFL-221ENST00000608903 SNRNP25Q9BV90 132 aaKnown RBP12.03□□□□□ -0.48
CTCFL-221ENST00000608903 RNF38Q9H0F5 515 aa12.03□□□□□ -0.48
CTCFL-221ENST00000608903 SMOC2Q9H3U7 446 aa12.03□□□□□ -0.48
CTCFL-221ENST00000608903 TLE6Q9H808 572 aa12.03□□□□□ -0.48
CTCFL-221ENST00000608903 TLR8Q9NR97 1041 aaKnown RBP12.03□□□□□ -0.48
CTCFL-221ENST00000608903 DDIT4Q9NX09 232 aa12.03□□□□□ -0.48
CTCFL-221ENST00000608903 MTMR10Q9NXD2 777 aa12.03□□□□□ -0.48
CTCFL-221ENST00000608903 CLIC5Q9NZA1 410 aa12.03□□□□□ -0.48
CTCFL-221ENST00000608903 STAP1Q9ULZ2 295 aa12.03□□□□□ -0.48
CTCFL-221ENST00000608903 SNX10Q9Y5X0 201 aa12.03□□□□□ -0.48
CTCFL-221ENST00000608903 DENND4CQ5VZ89 1909 aa12.03□□□□□ -0.48
CTCFL-221ENST00000608903 TRIOBPQ9H2D6 2365 aa12.02□□□□□ -0.48
CTCFL-221ENST00000608903 SOX1O00570 391 aaPredicted RBP12.02□□□□□ -0.48
CTCFL-221ENST00000608903 IRAK2O43187 625 aa12.02□□□□□ -0.48
CTCFL-221ENST00000608903 GJA1P17302 382 aa12.02□□□□□ -0.48
CTCFL-221ENST00000608903 IL4RP24394 825 aa12.02□□□□□ -0.48
CTCFL-221ENST00000608903 RDXP35241 583 aaKnown RBP12.02□□□□□ -0.48
CTCFL-221ENST00000608903 CXCR3P49682 368 aa12.02□□□□□ -0.48
CTCFL-221ENST00000608903 PPM1LQ5SGD2 360 aa12.02□□□□□ -0.48
CTCFL-221ENST00000608903 UBL4BQ8N7F7 174 aa12.02□□□□□ -0.48
CTCFL-221ENST00000608903 HSPH1Q92598 858 aa12.02□□□□□ -0.48
CTCFL-221ENST00000608903 ZNF707Q96C28 371 aaPredicted RBP12.02□□□□□ -0.48
CTCFL-221ENST00000608903 MRPL38Q96DV4 380 aaKnown RBP12.02□□□□□ -0.48
CTCFL-221ENST00000608903 PBKQ96KB5 322 aa12.02□□□□□ -0.48
CTCFL-221ENST00000608903 ZNF512Q96ME7 567 aaPredicted RBP12.02□□□□□ -0.48
CTCFL-221ENST00000608903 SLITRK1Q96PX8 696 aa12.02□□□□□ -0.48
CTCFL-221ENST00000608903 SLC22A12Q96S37 553 aa12.02□□□□□ -0.48
CTCFL-221ENST00000608903 CARD9Q9H257 536 aa12.02□□□□□ -0.48
CTCFL-221ENST00000608903 DNMT3BQ9UBC3 853 aaKnown RBP12.02□□□□□ -0.48
CTCFL-221ENST00000608903 FZD10Q9ULW2 581 aa12.02□□□□□ -0.48
CTCFL-221ENST00000608903 LINC01565O15544 149 aa12.02□□□□□ -0.49
CTCFL-221ENST00000608903 MOSPD3O75425 235 aa12.02□□□□□ -0.49
CTCFL-221ENST00000608903 C1RP00736 705 aa12.02□□□□□ -0.49
CTCFL-221ENST00000608903 LRG1P02750 347 aa12.02□□□□□ -0.49
CTCFL-221ENST00000608903 NTHL1P78549 312 aa12.02□□□□□ -0.49
CTCFL-221ENST00000608903 EFEMP1Q12805 493 aa12.02□□□□□ -0.49
CTCFL-221ENST00000608903 MMRN1Q13201 1228 aa12.02□□□□□ -0.49
CTCFL-221ENST00000608903 VEPH1Q14D04 833 aa12.02□□□□□ -0.49
CTCFL-221ENST00000608903 LRIT3Q3SXY7 679 aa12.02□□□□□ -0.49
CTCFL-221ENST00000608903 POLNQ7Z5Q5 900 aa12.02□□□□□ -0.49
CTCFL-221ENST00000608903 ARHGAP18Q8N392 663 aa12.02□□□□□ -0.49
CTCFL-221ENST00000608903 WBP2Q969T9 261 aa12.02□□□□□ -0.49
CTCFL-221ENST00000608903 TCEAL4Q96EI5 215 aa12.02□□□□□ -0.49
CTCFL-221ENST00000608903 SLC39A13Q96H72 371 aa12.02□□□□□ -0.49
CTCFL-221ENST00000608903 PLEKHA4Q9H4M7 779 aa12.02□□□□□ -0.49
CTCFL-221ENST00000608903 FAM204AQ9H8W3 233 aa12.02□□□□□ -0.49
CTCFL-221ENST00000608903 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms