RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 SENP7Q9BQF6 1050 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 SYT11Q9BT88 431 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 APOL6Q9BWW8 343 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 OLAHQ9NV23 265 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.97□□□□□ -0.33
CTCFL-218ENST00000608440 KLQ9UEF7 1012 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 RIMS3Q9UJD0 308 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 TAF4O00268 1085 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 FOXN3O00409 490 aaPredicted RBP12.97□□□□□ -0.33
CTCFL-218ENST00000608440 PLOD2O00469 737 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 NOP56O00567 594 aaKnown RBP12.97□□□□□ -0.33
CTCFL-218ENST00000608440 MCF2P10911 925 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 FGFR3P22607 806 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 BMPR1AP36894 532 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 ETV4P43268 484 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 HEATR4Q86WZ0 1026 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 RNF148Q8N7C7 305 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 DTX3Q8N9I9 347 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 BBOF1Q8ND07 529 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 ZNF280CQ8ND82 737 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 SERAC1Q96JX3 654 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 C17orf80Q9BSJ5 609 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 C2orf49Q9BVC5 232 aaPredicted RBP12.97□□□□□ -0.33
CTCFL-218ENST00000608440 FRMD8Q9BZ67 464 aaPredicted RBP12.97□□□□□ -0.33
CTCFL-218ENST00000608440 NOL6Q9H6R4 1146 aaKnown RBP12.97□□□□□ -0.33
CTCFL-218ENST00000608440 PARVGQ9HBI0 331 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 CCDC177Q9NQR7 707 aaPredicted RBP12.97□□□□□ -0.33
CTCFL-218ENST00000608440 CRNNQ9UBG3 495 aaPredicted RBP12.97□□□□□ -0.33
CTCFL-218ENST00000608440 JAG2Q9Y219 1238 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 AP3B1O00203 1094 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 GLULP15104 373 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 AOC1P19801 751 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 GPX6P59796 221 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 CHI3L2Q15782 390 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 SMU1Q2TAY7 513 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 FOXR2Q6PJQ5 311 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 ZCCHC23Q6ZST2 131 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 UBE2Q1Q7Z7E8 422 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 TICAM1Q8IUC6 712 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 TAB3Q8N5C8 712 aaPredicted RBP12.97□□□□□ -0.33
CTCFL-218ENST00000608440 CCDC33Q8N5R6 958 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 ADCY4Q8NFM4 1077 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 GPR88Q9GZN0 384 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 C20orf27Q9GZN8 174 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 SSU72Q9NP77 194 aaKnown RBP12.97□□□□□ -0.33
CTCFL-218ENST00000608440 AFG3L2Q9Y4W6 797 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 PCDHA2Q9Y5H9 948 aa12.97□□□□□ -0.33
CTCFL-218ENST00000608440 RGPD3A6NKT7 1758 aaPredicted RBP12.96□□□□□ -0.33
CTCFL-218ENST00000608440 RGPD4Q7Z3J3 1758 aa12.96□□□□□ -0.33
CTCFL-218ENST00000608440 CYB561D2O14569 222 aa12.96□□□□□ -0.33
CTCFL-218ENST00000608440 KCNH1O95259 989 aa12.96□□□□□ -0.33
CTCFL-218ENST00000608440 BDNFP23560 247 aa12.96□□□□□ -0.33
CTCFL-218ENST00000608440 TBCCQ15814 346 aa12.96□□□□□ -0.33
CTCFL-218ENST00000608440 PRR23BQ6ZRT6 265 aa12.96□□□□□ -0.33
CTCFL-218ENST00000608440 ADGRA1Q86SQ6 560 aa12.96□□□□□ -0.33
CTCFL-218ENST00000608440 CHSY1Q86X52 802 aa12.96□□□□□ -0.33
CTCFL-218ENST00000608440 CATSPER1Q8NEC5 780 aa12.96□□□□□ -0.33
CTCFL-218ENST00000608440 ETNPPLQ8TBG4 499 aa12.96□□□□□ -0.33
CTCFL-218ENST00000608440 ZNF486Q96H40 463 aaPredicted RBP12.96□□□□□ -0.33
CTCFL-218ENST00000608440 CALN1Q9BXU9 219 aa12.96□□□□□ -0.33
CTCFL-218ENST00000608440 IKZF4Q9H2S9 585 aa12.96□□□□□ -0.33
CTCFL-218ENST00000608440 SMARCAD1Q9H4L7 1026 aa12.96□□□□□ -0.33
CTCFL-218ENST00000608440 PLEKHA5Q9HAU0 1116 aa12.96□□□□□ -0.33
CTCFL-218ENST00000608440 RIC8BQ9NVN3 520 aa12.96□□□□□ -0.33
CTCFL-218ENST00000608440 LRP2BPQ9P2M1 347 aa12.96□□□□□ -0.33
CTCFL-218ENST00000608440 ARHGAP33O14559 1287 aa12.96□□□□□ -0.34
CTCFL-218ENST00000608440 SLC37A4O43826 429 aa12.96□□□□□ -0.34
CTCFL-218ENST00000608440 SEC24DO94855 1032 aaPredicted RBP12.96□□□□□ -0.34
CTCFL-218ENST00000608440 DHRS4L1P0CG22 281 aa12.96□□□□□ -0.34
CTCFL-218ENST00000608440 PRKCAP17252 672 aa12.96□□□□□ -0.34
CTCFL-218ENST00000608440 MAN1A1P33908 653 aa12.96□□□□□ -0.34
CTCFL-218ENST00000608440 HSPA13P48723 471 aa12.96□□□□□ -0.34
CTCFL-218ENST00000608440 TFAP4Q01664 338 aa12.96□□□□□ -0.34
CTCFL-218ENST00000608440 EFHC2Q5JST6 749 aa12.96□□□□□ -0.34
CTCFL-218ENST00000608440 CDHR3Q6ZTQ4 885 aa12.96□□□□□ -0.34
CTCFL-218ENST00000608440 FRMD7Q6ZUT3 714 aa12.96□□□□□ -0.34
CTCFL-218ENST00000608440 CRLF3Q8IUI8 442 aa12.96□□□□□ -0.34
CTCFL-218ENST00000608440 FIBCD1Q8N539 461 aa12.96□□□□□ -0.34
CTCFL-218ENST00000608440 FBXL18Q96ME1 805 aa12.96□□□□□ -0.34
CTCFL-218ENST00000608440 TRIT1Q9H3H1 467 aaKnown RBP12.96□□□□□ -0.34
CTCFL-218ENST00000608440 ANKMY1Q9P2S6 941 aa12.96□□□□□ -0.34
CTCFL-218ENST00000608440 SLC27A5Q9Y2P5 690 aa12.96□□□□□ -0.34
CTCFL-218ENST00000608440 DYNC1LI2O43237 492 aaPredicted RBP12.95□□□□□ -0.34
CTCFL-218ENST00000608440 PARNO95453 639 aaKnown RBP12.95□□□□□ -0.34
CTCFL-218ENST00000608440 RALAP11233 206 aa12.95□□□□□ -0.34
CTCFL-218ENST00000608440 CYP7A1P22680 504 aa12.95□□□□□ -0.34
CTCFL-218ENST00000608440 GJC1P36383 396 aa12.95□□□□□ -0.34
CTCFL-218ENST00000608440 ZNF135P52742 658 aaPredicted RBP12.95□□□□□ -0.34
CTCFL-218ENST00000608440 NAPAP54920 295 aa12.95□□□□□ -0.34
CTCFL-218ENST00000608440 PHC1P78364 1004 aa12.95□□□□□ -0.34
CTCFL-218ENST00000608440 GAD2Q05329 585 aa12.95□□□□□ -0.34
CTCFL-218ENST00000608440 PMS2P3Q13401 168 aa12.95□□□□□ -0.34
CTCFL-218ENST00000608440 PPP2R5DQ14738 602 aa12.95□□□□□ -0.34
CTCFL-218ENST00000608440 INAVAQ3KP66 663 aa12.95□□□□□ -0.34
CTCFL-218ENST00000608440 TWF2Q6IBS0 349 aaKnown RBP12.95□□□□□ -0.34
CTCFL-218ENST00000608440 GPBP1Q86WP2 473 aa12.95□□□□□ -0.34
CTCFL-218ENST00000608440 ZNF786Q8N393 782 aa12.95□□□□□ -0.34
CTCFL-218ENST00000608440 FAM47BQ8NA70 645 aa12.95□□□□□ -0.34
CTCFL-218ENST00000608440 ZSWIM2Q8NEG5 633 aa12.95□□□□□ -0.34
CTCFL-218ENST00000608440 E2F7Q96AV8 911 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms