RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 GABRG3Q99928 467 aa8□□□□□ -1.13
CUX1-219ENST00000606749 PLK2Q9NYY3 685 aa8□□□□□ -1.13
CUX1-219ENST00000606749 MARCH2Q9P0N8 246 aa8□□□□□ -1.13
CUX1-219ENST00000606749 EVLQ9UI08 416 aaPredicted RBP8□□□□□ -1.13
CUX1-219ENST00000606749 AGO1Q9UL18 857 aaKnown RBP8□□□□□ -1.13
CUX1-219ENST00000606749 ZNF510Q9Y2H8 683 aa8□□□□□ -1.13
CUX1-219ENST00000606749 NUP205Q92621 2012 aa8□□□□□ -1.13
CUX1-219ENST00000606749 SLC12A8A0AV02 714 aa7.99□□□□□ -1.13
CUX1-219ENST00000606749 TRIM49BA6NDI0 452 aa7.99□□□□□ -1.13
CUX1-219ENST00000606749 TULP2O00295 520 aa7.99□□□□□ -1.13
CUX1-219ENST00000606749 GFRA2O00451 464 aa7.99□□□□□ -1.13
CUX1-219ENST00000606749 SLC16A3O15427 465 aaKnown RBP7.99□□□□□ -1.13
CUX1-219ENST00000606749 ZBTB24O43167 697 aaPredicted RBP7.99□□□□□ -1.13
CUX1-219ENST00000606749 ZNF217O75362 1048 aa7.99□□□□□ -1.13
CUX1-219ENST00000606749 ZBED1O96006 694 aa7.99□□□□□ -1.13
CUX1-219ENST00000606749 PENKP01210 267 aaPredicted RBP7.99□□□□□ -1.13
CUX1-219ENST00000606749 HMBSP08397 361 aa7.99□□□□□ -1.13
CUX1-219ENST00000606749 NDUFV2P19404 249 aa7.99□□□□□ -1.13
CUX1-219ENST00000606749 ITPKAP23677 461 aa7.99□□□□□ -1.13
CUX1-219ENST00000606749 PMLP29590 882 aa7.99□□□□□ -1.13
CUX1-219ENST00000606749 CORO1AP31146 461 aaKnown RBP7.99□□□□□ -1.13
CUX1-219ENST00000606749 SLC8A3P57103 927 aa7.99□□□□□ -1.13
CUX1-219ENST00000606749 YWHAGP61981 247 aaKnown RBP eCLIP7.99□□□□□ -1.13
CUX1-219ENST00000606749 LRRC63Q05C16 580 aa7.99□□□□□ -1.13
CUX1-219ENST00000606749 PDE4CQ08493 712 aa7.99□□□□□ -1.13
CUX1-219ENST00000606749 CUL2Q13617 745 aa7.99□□□□□ -1.13
CUX1-219ENST00000606749 TRIM61Q5EBN2 209 aa7.99□□□□□ -1.13
CUX1-219ENST00000606749 DCAF17Q5H9S7 520 aaPredicted RBP7.99□□□□□ -1.13
CUX1-219ENST00000606749 FYB2Q5VWT5 728 aa7.99□□□□□ -1.13
CUX1-219ENST00000606749 LYSMD4Q5XG99 296 aa7.99□□□□□ -1.13
CUX1-219ENST00000606749 PSAPL1Q6NUJ1 521 aa7.99□□□□□ -1.13
CUX1-219ENST00000606749 SLC36A4Q6YBV0 504 aa7.99□□□□□ -1.13
CUX1-219ENST00000606749 ARMCX6Q7L4S7 300 aa7.99□□□□□ -1.13
CUX1-219ENST00000606749 BHLHA9Q7RTU4 235 aa7.99□□□□□ -1.13
CUX1-219ENST00000606749 DENND1CQ8IV53 801 aa7.99□□□□□ -1.13
CUX1-219ENST00000606749 DEFB119Q8N690 84 aa7.99□□□□□ -1.13
CUX1-219ENST00000606749 SMARCE1Q969G3 411 aa7.99□□□□□ -1.13
CUX1-219ENST00000606749 SLC35C1Q96A29 364 aa7.99□□□□□ -1.13
CUX1-219ENST00000606749 ERLEC1Q96DZ1 483 aa7.99□□□□□ -1.13
CUX1-219ENST00000606749 TIGD1Q96MW7 591 aa7.99□□□□□ -1.13
CUX1-219ENST00000606749 GTPBP4Q9BZE4 634 aaKnown RBP7.99□□□□□ -1.13
CUX1-219ENST00000606749 ULBP1Q9BZM6 244 aa7.99□□□□□ -1.13
CUX1-219ENST00000606749 DCLK3Q9C098 648 aa7.99□□□□□ -1.13
CUX1-219ENST00000606749 TMEM9BQ9NQ34 198 aa7.99□□□□□ -1.13
CUX1-219ENST00000606749 CALCOCO1Q9P1Z2 691 aa7.99□□□□□ -1.13
CUX1-219ENST00000606749 ARMCX3Q9UH62 379 aaPredicted RBP7.99□□□□□ -1.13
CUX1-219ENST00000606749 RASAL2Q9UJF2 1139 aa7.99□□□□□ -1.13
CUX1-219ENST00000606749 PILRBQ9UKJ0 227 aa7.99□□□□□ -1.13
CUX1-219ENST00000606749 KIAA1257Q9ULG3 409 aa7.99□□□□□ -1.13
CUX1-219ENST00000606749 SLC27A6Q9Y2P4 619 aa7.99□□□□□ -1.13
CUX1-219ENST00000606749 RAD54BQ9Y620 910 aa7.99□□□□□ -1.13
CUX1-219ENST00000606749 NCOR2Q9Y618 2525 aa7.99□□□□□ -1.13
CUX1-219ENST00000606749 SPTBN2O15020 2390 aa7.99□□□□□ -1.13
CUX1-219ENST00000606749 IGHV1OR15-9A0A0B4J2B8 117 aa7.98□□□□□ -1.13
CUX1-219ENST00000606749 GIPC1O14908 333 aa7.98□□□□□ -1.13
CUX1-219ENST00000606749 XPO1O14980 1071 aaKnown RBP7.98□□□□□ -1.13
CUX1-219ENST00000606749 PMM2O15305 246 aa7.98□□□□□ -1.13
CUX1-219ENST00000606749 AP5Z1O43299 807 aa7.98□□□□□ -1.13
CUX1-219ENST00000606749 VDRP11473 427 aa7.98□□□□□ -1.13
CUX1-219ENST00000606749 CD44P16070 742 aaKnown RBP7.98□□□□□ -1.13
CUX1-219ENST00000606749 DPP6P42658 865 aa7.98□□□□□ -1.13
CUX1-219ENST00000606749 FMO5P49326 533 aa7.98□□□□□ -1.13
CUX1-219ENST00000606749 NOVA1P51513 510 aaKnown RBP7.98□□□□□ -1.13
CUX1-219ENST00000606749 BCAT1P54687 386 aa7.98□□□□□ -1.13
CUX1-219ENST00000606749 MFAP3P55082 362 aa7.98□□□□□ -1.13
CUX1-219ENST00000606749 YWHAEP62258 255 aaKnown RBP7.98□□□□□ -1.13
CUX1-219ENST00000606749 NUCB2P80303 420 aa7.98□□□□□ -1.13
CUX1-219ENST00000606749 SHC2P98077 582 aa7.98□□□□□ -1.13
CUX1-219ENST00000606749 RPL6Q02878 288 aaKnown RBP7.98□□□□□ -1.13
CUX1-219ENST00000606749 ZNF33AQ06730 810 aa7.98□□□□□ -1.13
CUX1-219ENST00000606749 BST2Q10589 180 aaKnown RBP7.98□□□□□ -1.13
CUX1-219ENST00000606749 LMAN2Q12907 356 aa7.98□□□□□ -1.13
CUX1-219ENST00000606749 LRMPQ12912 555 aa7.98□□□□□ -1.13
CUX1-219ENST00000606749 TRIP4Q15650 581 aaPredicted RBP7.98□□□□□ -1.13
CUX1-219ENST00000606749 GEN1Q17RS7 908 aa7.98□□□□□ -1.13
CUX1-219ENST00000606749 DUOXA1Q1HG43 343 aa7.98□□□□□ -1.13
CUX1-219ENST00000606749 GOLGA7BQ2TAP0 167 aa7.98□□□□□ -1.13
CUX1-219ENST00000606749 PKDCCQ504Y2 493 aa7.98□□□□□ -1.13
CUX1-219ENST00000606749 SGO2Q562F6 1265 aa7.98□□□□□ -1.13
CUX1-219ENST00000606749 SH3PXD2AQ5TCZ1 1133 aa7.98□□□□□ -1.13
CUX1-219ENST00000606749 PEAR1Q5VY43 1037 aaPredicted RBP7.98□□□□□ -1.13
CUX1-219ENST00000606749 BSPRYQ5W0U4 402 aa7.98□□□□□ -1.13
CUX1-219ENST00000606749 ISM2Q6H9L7 571 aa7.98□□□□□ -1.13
CUX1-219ENST00000606749 SLC23A3Q6PIS1 610 aa7.98□□□□□ -1.13
CUX1-219ENST00000606749 RSRC2Q7L4I2 434 aaKnown RBP7.98□□□□□ -1.13
CUX1-219ENST00000606749 FAM217AQ8IXS0 508 aa7.98□□□□□ -1.13
CUX1-219ENST00000606749 ELOA2Q8IYF1 753 aaPredicted RBP7.98□□□□□ -1.13
CUX1-219ENST00000606749 CPXM2Q8N436 756 aa7.98□□□□□ -1.13
CUX1-219ENST00000606749 UBR7Q8N806 425 aa7.98□□□□□ -1.13
CUX1-219ENST00000606749 CEP76Q8TAP6 659 aa7.98□□□□□ -1.13
CUX1-219ENST00000606749 UBA3Q8TBC4 463 aa7.98□□□□□ -1.13
CUX1-219ENST00000606749 KCTD13Q8WZ19 329 aa7.98□□□□□ -1.13
CUX1-219ENST00000606749 DHTKD1Q96HY7 919 aaPredicted RBP7.98□□□□□ -1.13
CUX1-219ENST00000606749 PIWIL1Q96J94 861 aaKnown RBP7.98□□□□□ -1.13
CUX1-219ENST00000606749 MRGPRX1Q96LB2 322 aa7.98□□□□□ -1.13
CUX1-219ENST00000606749 NUSAP1Q9BXS6 441 aaKnown RBP7.98□□□□□ -1.13
CUX1-219ENST00000606749 SLC6A17Q9H1V8 727 aa7.98□□□□□ -1.13
CUX1-219ENST00000606749 LRRC4Q9HBW1 653 aa7.98□□□□□ -1.13
CUX1-219ENST00000606749 METTL14Q9HCE5 456 aaKnown RBP7.98□□□□□ -1.13
CUX1-219ENST00000606749 CACNA2D2Q9NY47 1150 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms