RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 RFPL3O75679 317 aa16.23■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 TBX18O95935 607 aa16.23■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 BMP15O95972 392 aa16.23■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 EPHX1P07099 455 aa16.23■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 DLATP10515 647 aaKnown RBP16.23■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 ACO1P21399 889 aaKnown RBP16.23■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 CASP5P51878 434 aa16.23■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 COPAP53621 1224 aa16.23■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 SV2BQ7L1I2 683 aa16.23■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 TNIP3Q96KP6 325 aa16.23■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 ARID3AQ99856 593 aa16.23■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 NRSN2Q9GZP1 204 aa16.23■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 C6orf106Q9H6K1 298 aaPredicted RBP16.23■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 OSGEPQ9NPF4 335 aa16.23■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 NXF1Q9UBU9 619 aaKnown RBP16.23■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 STK17AQ9UEE5 414 aa16.23■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 SLC27A6Q9Y2P4 619 aa16.23■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.23■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 FAM92AA1XBS5 289 aa16.22■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 ERVH48-1M5A8F1 160 aa16.22■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 ENC1O14682 589 aa16.22■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 AP1G2O75843 785 aa16.22■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 CST3P01034 146 aaPredicted RBP16.22■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 C1SP09871 688 aa16.22■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 CLDN6P56747 220 aa16.22■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 C21orf59P57076 290 aa16.22■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 TARDBPQ13148 414 aaKnown RBP eCLIP16.22■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 TRPC3Q13507 836 aa16.22■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 ENPP2Q13822 863 aa16.22■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 ZNF234Q14588 700 aa16.22■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 LAYNQ6UX15 382 aa16.22■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 SERPINA13PQ6UXR4 307 aa16.22■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 CBWD2Q8IUF1 395 aa16.22■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 SNIP1Q8TAD8 396 aaKnown RBP16.22■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 FGF11Q92914 225 aa16.22■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 CIPCQ9C0C6 399 aa16.22■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 LHX5Q9H2C1 402 aa16.22■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 CLMPQ9H6B4 373 aa16.22■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 KRT82Q9NSB4 513 aa16.22■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 FBXO10Q9UK96 956 aa16.22■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 SLCO1B1Q9Y6L6 691 aa16.22■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 MUC22E2RYF6 1773 aaPredicted RBP16.22■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 ASXL3Q9C0F0 2248 aa16.22■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 FSBPO95073 299 aa16.21■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 LDOC1O95751 146 aaPredicted RBP16.21■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 ACSL1P33121 698 aa16.21■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 CHKAP35790 457 aa16.21■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 PLA2G4AP47712 749 aa16.21■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 MFAP3P55082 362 aa16.21■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 GRIN1Q05586 938 aa16.21■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 CCDC173Q0VFZ6 552 aa16.21■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 RTP5Q14D33 572 aa16.21■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 GEN1Q17RS7 908 aa16.21■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 STXBP4Q6ZWJ1 553 aa16.21■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 ANKS1BQ7Z6G8 1248 aa16.21■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 CNDP2Q96KP4 475 aaKnown RBP16.21■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 BTBD1Q9H0C5 482 aa16.21■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 KIAA1586Q9HCI6 787 aa16.21■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 ELOVL2Q9NXB9 296 aa16.21■□□□□ 0.19
NEDD8-MDP1-204ENST00000605847 SEMA4FO95754 770 aa16.2■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 ITGAVP06756 1048 aa16.2■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 ABCB4P21439 1286 aa16.2■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 CD27P26842 260 aa16.2■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 ACTN2P35609 894 aa16.2■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 CTSKP43235 329 aa16.2■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 BCAT1P54687 386 aa16.2■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 DNAJC3Q13217 504 aa16.2■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 EIF4HQ15056 248 aaKnown RBP16.2■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 HES3Q5TGS1 186 aa16.2■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 GATAD2AQ86YP4 633 aa16.2■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 RDH13Q8NBN7 331 aa16.2■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 OR2T3Q8NH03 318 aa16.2■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 SYAP1Q96A49 352 aaPredicted RBP16.2■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 SKA1Q96BD8 255 aa16.2■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 BIRC7Q96CA5 298 aa16.2■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 DNAJC19Q96DA6 116 aa16.2■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 TMEM176AQ96HP8 235 aa16.2■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 ACE2Q9BYF1 805 aaPredicted RBP16.2■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 CYLDQ9NQC7 956 aa16.2■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 HSPBP1Q9NZL4 362 aa16.2■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 DNMT3LQ9UJW3 386 aa16.2■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 ZNF510Q9Y2H8 683 aa16.2■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 A0A1B0GTQ1 180 aa16.19■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 ARHGAP6O43182 974 aa16.19■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 PAPSS1O43252 624 aaPredicted RBP16.19■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 CYBBP04839 570 aa16.19■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 PRKCHP24723 683 aa16.19■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 ATICP31939 592 aa16.19■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 PGFP49763 221 aa16.19■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 MAP3K7CLP57077 242 aa16.19■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 KCNC4Q03721 635 aa16.19■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 TLE3Q04726 772 aa16.19■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 C10orf120Q5SQS8 335 aa16.19■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 FYB2Q5VWT5 728 aa16.19■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 RRAGBQ5VZM2 374 aa16.19■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 Q6ZNB5 142 aa16.19■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 PAQR9Q6ZVX9 377 aa16.19■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 USP49Q70CQ1 688 aa16.19■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 TADA2BQ86TJ2 420 aa16.19■□□□□ 0.18
NEDD8-MDP1-204ENST00000605847 EPSTI1Q96J88 318 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms