RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 PLEKHH3Q7Z736 793 aa12.22□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 RTP4Q96DX8 246 aa12.22□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 ZFP42Q96MM3 310 aa12.22□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 C11orf84Q9BUA3 381 aaPredicted RBP12.22□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 SNX25Q9H3E2 840 aa12.22□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 DTLQ9NZJ0 730 aa12.22□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 SLC17A6Q9P2U8 582 aa12.22□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 CPA4Q9UI42 421 aa12.22□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 UBQLN1Q9UMX0 589 aaKnown RBP12.22□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 HTTP42858 3142 aa12.22□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 MEIS3P2A8K0S8 358 aa12.22□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 ETV4P43268 484 aa12.22□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 GTF2A2P52657 109 aa12.22□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 BCAT1P54687 386 aa12.22□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 ADIGQ0VDE8 80 aa12.22□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 DCAF6Q58WW2 860 aa12.22□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 ARHGAP17Q68EM7 881 aa12.22□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 IQSEC1Q6DN90 963 aa12.22□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 DENND5BQ6ZUT9 1274 aa12.22□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 PIGZQ86VD9 579 aa12.22□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 SLC26A11Q86WA9 606 aa12.22□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 UNC93AQ86WB7 457 aa12.22□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 TP53INP2Q8IXH6 220 aa12.22□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 DEFB106AQ8N104 65 aa12.22□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 STAMBPL1Q96FJ0 436 aa12.22□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 PGLYRP2Q96PD5 576 aa12.22□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 SSU72Q9NP77 194 aaKnown RBP12.22□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 FLRT1Q9NZU1 646 aa12.22□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 MORF4L1Q9UBU8 362 aa12.22□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 NRCAMQ92823 1304 aa12.21□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 RRN3P2A6NIE6 340 aa12.21□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 CYB561D2O14569 222 aa12.21□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 TM9SF1O15321 606 aa12.21□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 SETSIPP0DME0 302 aa12.21□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 CSH1P0DML2 217 aa12.21□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 CSH2P0DML3 217 aa12.21□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 ALDH3A1P30838 453 aa12.21□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 SLC45A4Q5BKX6 768 aa12.21□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 MROH9Q5TGP6 573 aa12.21□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 BSPRYQ5W0U4 402 aa12.21□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 CTU1Q7Z7A3 348 aaKnown RBP12.21□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 OSTM1Q86WC4 334 aa12.21□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 VPS52Q8N1B4 723 aa12.21□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 APPL2Q8NEU8 664 aa12.21□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 STK32AQ8WU08 396 aa12.21□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 CENPIQ92674 756 aaPredicted RBP12.21□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 PRR11Q96HE9 360 aaPredicted RBP12.21□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 SRPK1Q96SB4 655 aaKnown RBP12.21□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 VPS11Q9H270 941 aa12.21□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 ZNF395Q9H8N7 513 aaPredicted RBP12.21□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 DERAQ9Y315 318 aa12.21□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 F2P00734 622 aa12.21□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 VAV1P15498 845 aa12.21□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 PTPN9P43378 593 aa12.21□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 AFF1P51825 1210 aaKnown RBP12.21□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 NEK3P51956 506 aa12.21□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 CCDC15Q0P6D6 951 aa12.21□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 CCL14Q16627 93 aa12.21□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 NCBP2-AS2Q69YL0 99 aa12.21□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 CRYBG2Q8N1P7 616 aa12.21□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 ADAM32Q8TC27 787 aa12.21□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 GTF3C2Q8WUA4 911 aaPredicted RBP12.21□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 APOPT1Q96IL0 206 aa12.21□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 SIGLEC10Q96LC7 697 aa12.21□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 TSSK1BQ9BXA7 367 aa12.21□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 LILRA4P59901 499 aa12.21□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 SLC18A2Q05940 514 aa12.21□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 NME3Q13232 169 aa12.21□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 UBXN11Q5T124 520 aa12.21□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 SYPL2Q5VXT5 272 aa12.21□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 SMYD5Q6GMV2 418 aa12.21□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 TLK2Q86UE8 772 aa12.21□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 ADGRF2Q8IZF7 708 aa12.21□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 ALKBH8Q96BT7 664 aaKnown RBP12.21□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 FBXO6Q9NRD1 293 aaPredicted RBP12.21□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.21□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 IL1RAPL1Q9NZN1 696 aa12.21□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 ZNF638Q14966 1978 aaKnown RBP12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 HMX2A2RU54 273 aa12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 MBLAC1A4D2B0 266 aaPredicted RBP12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 CFAP69A5D8W1 941 aa12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 GLTPD2A6NH11 291 aa12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 COPEO14579 308 aa12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 CREB3O43889 395 aa12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 APOEP02649 317 aa12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 DHRS4L1P0CG22 281 aa12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 DESP17661 470 aa12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 SULT1E1P49888 294 aa12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 MFSD10Q14728 455 aa12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 PREPLQ4J6C6 727 aaPredicted RBP12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 FYB2Q5VWT5 728 aa12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 HEATR6Q6AI08 1181 aaKnown RBP12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 CASC4Q6P4E1 433 aa12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 HFE2Q6ZVN8 426 aa12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 ZDHHC17Q8IUH5 632 aa12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 SLC7A6OSQ96CW6 309 aaPredicted RBP12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 GNEQ9Y223 722 aaKnown RBP12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 IPPQ9Y573 584 aa12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 TIMM13Q9Y5L4 95 aaPredicted RBP12.2□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 NUP205Q92621 2012 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms