RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 ZNF132P52740 706 aa12.42□□□□□ -0.42
PDLIM1P1-201ENST00000604187 COPAP53621 1224 aa12.42□□□□□ -0.42
PDLIM1P1-201ENST00000604187 MFAP3P55082 362 aa12.42□□□□□ -0.42
PDLIM1P1-201ENST00000604187 CDH8P55286 799 aa12.42□□□□□ -0.42
PDLIM1P1-201ENST00000604187 CFHR1Q03591 330 aa12.42□□□□□ -0.42
PDLIM1P1-201ENST00000604187 GOLGA8FQ08AF8 430 aa12.42□□□□□ -0.42
PDLIM1P1-201ENST00000604187 GOLGA8DPQ0D2H9 430 aa12.42□□□□□ -0.42
PDLIM1P1-201ENST00000604187 ALCAMQ13740 583 aa12.42□□□□□ -0.42
PDLIM1P1-201ENST00000604187 ENPP2Q13822 863 aa12.42□□□□□ -0.42
PDLIM1P1-201ENST00000604187 SURF1Q15526 300 aa12.42□□□□□ -0.42
PDLIM1P1-201ENST00000604187 USP49Q70CQ1 688 aa12.42□□□□□ -0.42
PDLIM1P1-201ENST00000604187 SMARCD1Q96GM5 515 aa12.42□□□□□ -0.42
PDLIM1P1-201ENST00000604187 PCED1AQ9H1Q7 454 aa12.42□□□□□ -0.42
PDLIM1P1-201ENST00000604187 SMYD3Q9H7B4 428 aa12.42□□□□□ -0.42
PDLIM1P1-201ENST00000604187 TM9SF3Q9HD45 589 aa12.42□□□□□ -0.42
PDLIM1P1-201ENST00000604187 NXF1Q9UBU9 619 aaKnown RBP12.42□□□□□ -0.42
PDLIM1P1-201ENST00000604187 STK17AQ9UEE5 414 aa12.42□□□□□ -0.42
PDLIM1P1-201ENST00000604187 SLC27A6Q9Y2P4 619 aa12.42□□□□□ -0.42
PDLIM1P1-201ENST00000604187 AK5Q9Y6K8 562 aa12.42□□□□□ -0.42
PDLIM1P1-201ENST00000604187 HELZP42694 1942 aaKnown RBP12.42□□□□□ -0.42
PDLIM1P1-201ENST00000604187 MGAQ8IWI9 3026 aa12.42□□□□□ -0.42
PDLIM1P1-201ENST00000604187 KIAA0391O15091 583 aaKnown RBP12.41□□□□□ -0.42
PDLIM1P1-201ENST00000604187 MDM4O15151 490 aa12.41□□□□□ -0.42
PDLIM1P1-201ENST00000604187 AP1G2O75843 785 aa12.41□□□□□ -0.42
PDLIM1P1-201ENST00000604187 PENKP01210 267 aaPredicted RBP12.41□□□□□ -0.42
PDLIM1P1-201ENST00000604187 EPHX1P07099 455 aa12.41□□□□□ -0.42
PDLIM1P1-201ENST00000604187 FAM163BP0C2L3 166 aa12.41□□□□□ -0.42
PDLIM1P1-201ENST00000604187 ACO1P21399 889 aaKnown RBP12.41□□□□□ -0.42
PDLIM1P1-201ENST00000604187 PRKCHP24723 683 aa12.41□□□□□ -0.42
PDLIM1P1-201ENST00000604187 GRIA4P48058 902 aa12.41□□□□□ -0.42
PDLIM1P1-201ENST00000604187 KCNT1Q5JUK3 1230 aa12.41□□□□□ -0.42
PDLIM1P1-201ENST00000604187 PCSK4Q6UW60 755 aa12.41□□□□□ -0.42
PDLIM1P1-201ENST00000604187 PAQR9Q6ZVX9 377 aa12.41□□□□□ -0.42
PDLIM1P1-201ENST00000604187 GPR155Q7Z3F1 870 aa12.41□□□□□ -0.42
PDLIM1P1-201ENST00000604187 SORCS1Q8WY21 1168 aa12.41□□□□□ -0.42
PDLIM1P1-201ENST00000604187 BAP1Q92560 729 aa12.41□□□□□ -0.42
PDLIM1P1-201ENST00000604187 EPSTI1Q96J88 318 aa12.41□□□□□ -0.42
PDLIM1P1-201ENST00000604187 CYLDQ9NQC7 956 aa12.41□□□□□ -0.42
PDLIM1P1-201ENST00000604187 TLR8Q9NR97 1041 aaKnown RBP12.41□□□□□ -0.42
PDLIM1P1-201ENST00000604187 COMMD8Q9NX08 183 aa12.41□□□□□ -0.42
PDLIM1P1-201ENST00000604187 HSPBP1Q9NZL4 362 aa12.41□□□□□ -0.42
PDLIM1P1-201ENST00000604187 FBXO10Q9UK96 956 aa12.41□□□□□ -0.42
PDLIM1P1-201ENST00000604187 TEX51A0A1B0GUA7 166 aa12.4□□□□□ -0.42
PDLIM1P1-201ENST00000604187 CBX4O00257 560 aa12.4□□□□□ -0.42
PDLIM1P1-201ENST00000604187 CYP26A1O43174 497 aa12.4□□□□□ -0.42
PDLIM1P1-201ENST00000604187 CLSTN1O94985 981 aa12.4□□□□□ -0.42
PDLIM1P1-201ENST00000604187 BMP15O95972 392 aa12.4□□□□□ -0.42
PDLIM1P1-201ENST00000604187 TNNI1P19237 187 aa12.4□□□□□ -0.42
PDLIM1P1-201ENST00000604187 ACSL1P33121 698 aa12.4□□□□□ -0.42
PDLIM1P1-201ENST00000604187 ATP5C1P36542 298 aaKnown RBP12.4□□□□□ -0.42
PDLIM1P1-201ENST00000604187 CTSKP43235 329 aa12.4□□□□□ -0.42
PDLIM1P1-201ENST00000604187 MYL6P60660 151 aa12.4□□□□□ -0.42
PDLIM1P1-201ENST00000604187 TARDBPQ13148 414 aaKnown RBP eCLIP12.4□□□□□ -0.42
PDLIM1P1-201ENST00000604187 ORC1Q13415 861 aa12.4□□□□□ -0.42
PDLIM1P1-201ENST00000604187 ZNF234Q14588 700 aa12.4□□□□□ -0.42
PDLIM1P1-201ENST00000604187 SERPINA13PQ6UXR4 307 aa12.4□□□□□ -0.42
PDLIM1P1-201ENST00000604187 Q6ZNB5 142 aa12.4□□□□□ -0.42
PDLIM1P1-201ENST00000604187 SV2BQ7L1I2 683 aa12.4□□□□□ -0.42
PDLIM1P1-201ENST00000604187 ANKS1BQ7Z6G8 1248 aa12.4□□□□□ -0.42
PDLIM1P1-201ENST00000604187 ADAT2Q7Z6V5 191 aaKnown RBP12.4□□□□□ -0.42
PDLIM1P1-201ENST00000604187 FUKQ8N0W3 1084 aa12.4□□□□□ -0.42
PDLIM1P1-201ENST00000604187 ZMIZ2Q8NF64 920 aa12.4□□□□□ -0.42
PDLIM1P1-201ENST00000604187 SNIP1Q8TAD8 396 aaKnown RBP12.4□□□□□ -0.42
PDLIM1P1-201ENST00000604187 UCMAQ8WVF2 138 aa12.4□□□□□ -0.42
PDLIM1P1-201ENST00000604187 CCDC127Q96BQ5 260 aa12.4□□□□□ -0.42
PDLIM1P1-201ENST00000604187 CGRRF1Q99675 332 aa12.4□□□□□ -0.42
PDLIM1P1-201ENST00000604187 SMOQ99835 787 aa12.4□□□□□ -0.42
PDLIM1P1-201ENST00000604187 CIPCQ9C0C6 399 aa12.4□□□□□ -0.42
PDLIM1P1-201ENST00000604187 LHX5Q9H2C1 402 aa12.4□□□□□ -0.42
PDLIM1P1-201ENST00000604187 FBXO44Q9H4M3 255 aa12.4□□□□□ -0.42
PDLIM1P1-201ENST00000604187 OSGEPQ9NPF4 335 aa12.4□□□□□ -0.42
PDLIM1P1-201ENST00000604187 OSER1Q9NX31 292 aa12.4□□□□□ -0.42
PDLIM1P1-201ENST00000604187 NUDT5Q9UKK9 219 aa12.4□□□□□ -0.42
PDLIM1P1-201ENST00000604187 PCDHGA1Q9Y5H4 931 aa12.4□□□□□ -0.42
PDLIM1P1-201ENST00000604187 ANAPC1Q9H1A4 1944 aa12.4□□□□□ -0.42
PDLIM1P1-201ENST00000604187 GOLGA4Q13439 2230 aaKnown RBP12.39□□□□□ -0.43
PDLIM1P1-201ENST00000604187 ENC1O14682 589 aa12.39□□□□□ -0.43
PDLIM1P1-201ENST00000604187 RFPL3O75679 317 aa12.39□□□□□ -0.43
PDLIM1P1-201ENST00000604187 BEST1O76090 585 aa12.39□□□□□ -0.43
PDLIM1P1-201ENST00000604187 FSBPO95073 299 aa12.39□□□□□ -0.43
PDLIM1P1-201ENST00000604187 SEMA4FO95754 770 aa12.39□□□□□ -0.43
PDLIM1P1-201ENST00000604187 CCDC130P13994 396 aa12.39□□□□□ -0.43
PDLIM1P1-201ENST00000604187 CXADRP78310 365 aa12.39□□□□□ -0.43
PDLIM1P1-201ENST00000604187 TLE3Q04726 772 aa12.39□□□□□ -0.43
PDLIM1P1-201ENST00000604187 DNAJC3Q13217 504 aa12.39□□□□□ -0.43
PDLIM1P1-201ENST00000604187 TRPC3Q13507 836 aa12.39□□□□□ -0.43
PDLIM1P1-201ENST00000604187 SNRNP35Q16560 246 aaKnown RBP12.39□□□□□ -0.43
PDLIM1P1-201ENST00000604187 HES3Q5TGS1 186 aa12.39□□□□□ -0.43
PDLIM1P1-201ENST00000604187 FYB2Q5VWT5 728 aa12.39□□□□□ -0.43
PDLIM1P1-201ENST00000604187 SCARA5Q6ZMJ2 495 aa12.39□□□□□ -0.43
PDLIM1P1-201ENST00000604187 GPRIN1Q7Z2K8 1008 aa12.39□□□□□ -0.43
PDLIM1P1-201ENST00000604187 GATAD2AQ86YP4 633 aa12.39□□□□□ -0.43
PDLIM1P1-201ENST00000604187 SLC2A14Q8TDB8 520 aa12.39□□□□□ -0.43
PDLIM1P1-201ENST00000604187 JAKMIP2Q96AA8 810 aa12.39□□□□□ -0.43
PDLIM1P1-201ENST00000604187 BIRC7Q96CA5 298 aa12.39□□□□□ -0.43
PDLIM1P1-201ENST00000604187 PHF12Q96QT6 1004 aa12.39□□□□□ -0.43
PDLIM1P1-201ENST00000604187 XYLT2Q9H1B5 865 aa12.39□□□□□ -0.43
PDLIM1P1-201ENST00000604187 PANK4Q9NVE7 773 aa12.39□□□□□ -0.43
PDLIM1P1-201ENST00000604187 ELOVL2Q9NXB9 296 aa12.39□□□□□ -0.43
PDLIM1P1-201ENST00000604187 CCDC39Q9UFE4 941 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms