RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 RIPOR1Q6ZS17 1223 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 FAM228AQ86W67 206 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 IZUMO1Q8IYV9 350 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 EXD1Q8NHP7 514 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 TPD52L3Q96J77 140 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 KLHL1Q9NR64 748 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 ALKQ9UM73 1620 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 ZNF57Q68EA5 555 aaPredicted RBP9.86□□□□□ -0.83
CSMD1-217ENST00000602723 USP49Q70CQ1 688 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 ATG9AQ7Z3C6 839 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 DHFR2Q86XF0 187 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 SYTL1Q8IYJ3 562 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 CYP39A1Q9NYL5 469 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 ZNF624Q9P2J8 865 aaPredicted RBP9.86□□□□□ -0.83
CSMD1-217ENST00000602723 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.86□□□□□ -0.83
CSMD1-217ENST00000602723 ITGB3P05106 788 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 ADRA2BP18089 450 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 ZNF177Q13360 481 aaPredicted RBP9.86□□□□□ -0.83
CSMD1-217ENST00000602723 MGAT5BQ3V5L5 792 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 ERO1BQ86YB8 467 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 CACTIN-AS1Q8N1I8 211 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 FAM84BQ96KN1 310 aaPredicted RBP9.86□□□□□ -0.83
CSMD1-217ENST00000602723 BTBD10Q9BSF8 475 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 SETBP1Q9Y6X0 1596 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 DGUOKQ16854 277 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 FAM120BQ96EK7 910 aaKnown RBP9.86□□□□□ -0.83
CSMD1-217ENST00000602723 MBD5Q9P267 1494 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 H3BQF6 201 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 RPS6KA4O75676 772 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 GH1P01241 217 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 TPBGLP0DKB5 382 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 KLHL24Q6TFL4 600 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 KRT74Q7RTS7 529 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 C1orf50Q9BV19 199 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 ITGB1BP2Q9UKP3 347 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 TBKBP1A7MCY6 615 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 TMEM114B3SHH9 223 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 CLOCKO15516 846 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 HS6ST1O60243 411 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 CPA3P15088 417 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 MAPKAPK2P49137 400 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 BAATQ14032 418 aaPredicted RBP9.86□□□□□ -0.83
CSMD1-217ENST00000602723 N4BP2L1Q5TBK1 243 aaPredicted RBP9.86□□□□□ -0.83
CSMD1-217ENST00000602723 SLFN11Q7Z7L1 901 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 QKIQ96PU8 341 aaKnown RBP eCLIP9.86□□□□□ -0.837e-33■■■■■ 356
CSMD1-217ENST00000602723 VAV3Q9UKW4 847 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 SHOC2Q9UQ13 582 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 LOC100506127A0A0U1RQW1 187 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 M0QYT0 321 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 VCLP18206 1134 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 SLC34A1Q06495 639 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 MYBPC2Q14324 1141 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 TDRD10Q5VZ19 366 aaKnown RBP9.86□□□□□ -0.83
CSMD1-217ENST00000602723 TIGD7Q6NT04 549 aaPredicted RBP9.86□□□□□ -0.83
CSMD1-217ENST00000602723 CLEC10AQ8IUN9 316 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 MIEF1Q9NQG6 463 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 TRPC4Q9UBN4 977 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 ERI2A8K979 691 aaKnown RBP9.85□□□□□ -0.83
CSMD1-217ENST00000602723 RXRGP48443 463 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 TGM3Q08188 693 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 GLB1LQ6UWU2 654 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 TSHZ1Q6ZSZ6 1077 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 ATP6V0D2Q8N8Y2 350 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 TMEM237Q96Q45 408 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 C9orf16Q9BUW7 83 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 DYRK1BQ9Y463 629 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 AP1G2O75843 785 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 YWHAQP27348 245 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 RPA1P27694 616 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 SLC11A2P49281 568 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 SDE2Q6IQ49 451 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 TARS2Q9BW92 718 aaKnown RBP9.85□□□□□ -0.83
CSMD1-217ENST00000602723 HMG20AQ9NP66 347 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 FRMPD1Q5SYB0 1578 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 FAM47E-STBD1D6RA91 191 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 FOXN3O00409 490 aaPredicted RBP9.85□□□□□ -0.83
CSMD1-217ENST00000602723 MAP3K6O95382 1288 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 ATP6V1C1P21283 382 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 RPL10AP62906 217 aaKnown RBP9.85□□□□□ -0.83
CSMD1-217ENST00000602723 EFCAB12Q6NXP0 572 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 PAIP1Q9H074 479 aaKnown RBP9.85□□□□□ -0.83
CSMD1-217ENST00000602723 ANKRD6Q9Y2G4 727 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 CAPN6Q9Y6Q1 641 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 KIAA1210Q9ULL0 1709 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 F5H5T6 163 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 C16orf86Q6ZW13 317 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.85□□□□□ -0.83
CSMD1-217ENST00000602723 ZSCAN18Q8TBC5 510 aaPredicted RBP9.85□□□□□ -0.83
CSMD1-217ENST00000602723 CRTAMO95727 393 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 LDLRP01130 860 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 ADARP55265 1226 aaKnown RBP9.85□□□□□ -0.83
CSMD1-217ENST00000602723 GRIP2Q9C0E4 1043 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 ACOT9Q9Y305 439 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 A0A087WXM4 84 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 LSM8O95777 96 aaKnown RBP9.85□□□□□ -0.83
CSMD1-217ENST00000602723 GZMAP12544 262 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 CCT3P49368 545 aaKnown RBP9.85□□□□□ -0.83
CSMD1-217ENST00000602723 KAT2BQ92831 832 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 SERAC1Q96JX3 654 aa9.85□□□□□ -0.83
CSMD1-217ENST00000602723 ARMC7Q9H6L4 198 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms