RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 IRS1P35568 1242 aa18.06■□□□□ 0.48
PPFIA3-207ENST00000602716 ADCY2Q08462 1091 aa18.06■□□□□ 0.48
PPFIA3-207ENST00000602716 CAMK1Q14012 370 aa18.06■□□□□ 0.48
PPFIA3-207ENST00000602716 SLC25A52Q3SY17 297 aa18.06■□□□□ 0.48
PPFIA3-207ENST00000602716 SEL1L2Q5TEA6 688 aa18.06■□□□□ 0.48
PPFIA3-207ENST00000602716 LRRC38Q5VT99 294 aa18.06■□□□□ 0.48
PPFIA3-207ENST00000602716 DENND5BQ6ZUT9 1274 aa18.06■□□□□ 0.48
PPFIA3-207ENST00000602716 TMC7Q7Z402 723 aa18.06■□□□□ 0.48
PPFIA3-207ENST00000602716 TAC4Q86UU9 113 aa18.06■□□□□ 0.48
PPFIA3-207ENST00000602716 FAM131BQ86XD5 332 aa18.06■□□□□ 0.48
PPFIA3-207ENST00000602716 POF1BQ8WVV4 589 aa18.06■□□□□ 0.48
PPFIA3-207ENST00000602716 IRGQQ8WZA9 623 aa18.06■□□□□ 0.48
PPFIA3-207ENST00000602716 SLITRK1Q96PX8 696 aa18.06■□□□□ 0.48
PPFIA3-207ENST00000602716 CAPS2Q9BXY5 557 aa18.06■□□□□ 0.48
PPFIA3-207ENST00000602716 RASSF4Q9H2L5 321 aa18.06■□□□□ 0.48
PPFIA3-207ENST00000602716 PLXNA3P51805 1871 aa18.06■□□□□ 0.48
PPFIA3-207ENST00000602716 CARNS1A5YM72 827 aa18.06■□□□□ 0.48
PPFIA3-207ENST00000602716 M0QYT0 321 aa18.06■□□□□ 0.48
PPFIA3-207ENST00000602716 SKOR1P84550 965 aa18.06■□□□□ 0.48
PPFIA3-207ENST00000602716 ZC3H12AQ5D1E8 599 aaKnown RBP18.06■□□□□ 0.48
PPFIA3-207ENST00000602716 ZFYVE27Q5T4F4 411 aa18.06■□□□□ 0.48
PPFIA3-207ENST00000602716 CCDC50Q8IVM0 306 aa18.06■□□□□ 0.48
PPFIA3-207ENST00000602716 C10orf67Q8IYJ2 551 aa18.06■□□□□ 0.48
PPFIA3-207ENST00000602716 SLC7A14Q8TBB6 771 aa18.06■□□□□ 0.48
PPFIA3-207ENST00000602716 GDF15Q99988 308 aa18.06■□□□□ 0.48
PPFIA3-207ENST00000602716 SNRNP25Q9BV90 132 aaKnown RBP18.06■□□□□ 0.48
PPFIA3-207ENST00000602716 HEMGNQ9BXL5 484 aa18.06■□□□□ 0.48
PPFIA3-207ENST00000602716 UBE2OQ9C0C9 1292 aaKnown RBP18.06■□□□□ 0.48
PPFIA3-207ENST00000602716 CERS4Q9HA82 394 aa18.06■□□□□ 0.48
PPFIA3-207ENST00000602716 ANLNQ9NQW6 1124 aa18.06■□□□□ 0.48
PPFIA3-207ENST00000602716 ENTPD7Q9NQZ7 604 aa18.06■□□□□ 0.48
PPFIA3-207ENST00000602716 IL37Q9NZH6 218 aa18.06■□□□□ 0.48
PPFIA3-207ENST00000602716 SCML2Q9UQR0 700 aa18.06■□□□□ 0.48
PPFIA3-207ENST00000602716 LRRD1A4D1F6 860 aa18.05■□□□□ 0.48
PPFIA3-207ENST00000602716 SLC38A8A6NNN8 435 aa18.05■□□□□ 0.48
PPFIA3-207ENST00000602716 H0YGN5 161 aa18.05■□□□□ 0.48
PPFIA3-207ENST00000602716 I6L893 689 aaPredicted RBP18.05■□□□□ 0.48
PPFIA3-207ENST00000602716 CAPN9O14815 690 aa18.05■□□□□ 0.48
PPFIA3-207ENST00000602716 KRT10P13645 584 aa18.05■□□□□ 0.48
PPFIA3-207ENST00000602716 NME3Q13232 169 aa18.05■□□□□ 0.48
PPFIA3-207ENST00000602716 ACAP1Q15027 740 aa18.05■□□□□ 0.48
PPFIA3-207ENST00000602716 SIX1Q15475 284 aaPredicted RBP18.05■□□□□ 0.48
PPFIA3-207ENST00000602716 POLNQ7Z5Q5 900 aa18.05■□□□□ 0.48
PPFIA3-207ENST00000602716 DQX1Q8TE96 717 aaKnown RBP18.05■□□□□ 0.48
PPFIA3-207ENST00000602716 SPATA17Q96L03 361 aa18.05■□□□□ 0.48
PPFIA3-207ENST00000602716 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.05■□□□□ 0.48
PPFIA3-207ENST00000602716 FNIP2Q9P278 1114 aa18.05■□□□□ 0.48
PPFIA3-207ENST00000602716 TTC7AQ9ULT0 858 aaPredicted RBP18.05■□□□□ 0.48
PPFIA3-207ENST00000602716 MAGED2Q9UNF1 606 aaPredicted RBP18.05■□□□□ 0.48
PPFIA3-207ENST00000602716 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.05■□□□□ 0.48
PPFIA3-207ENST00000602716 FAM92AA1XBS5 289 aa18.05■□□□□ 0.48
PPFIA3-207ENST00000602716 TGM5O43548 720 aa18.05■□□□□ 0.48
PPFIA3-207ENST00000602716 PRPSAP2O60256 369 aa18.05■□□□□ 0.48
PPFIA3-207ENST00000602716 CXCL14O95715 111 aa18.05■□□□□ 0.48
PPFIA3-207ENST00000602716 RALAP11233 206 aa18.05■□□□□ 0.48
PPFIA3-207ENST00000602716 TAF10Q12962 218 aa18.05■□□□□ 0.48
PPFIA3-207ENST00000602716 CFAP58Q5T655 872 aa18.05■□□□□ 0.48
PPFIA3-207ENST00000602716 TPGS2Q68CL5 300 aa18.05■□□□□ 0.48
PPFIA3-207ENST00000602716 SLC13A5Q86YT5 568 aaPredicted RBP18.05■□□□□ 0.48
PPFIA3-207ENST00000602716 EXD1Q8NHP7 514 aa18.05■□□□□ 0.48
PPFIA3-207ENST00000602716 FBXO32Q969P5 355 aa18.05■□□□□ 0.48
PPFIA3-207ENST00000602716 TMEM51Q9NW97 253 aa18.05■□□□□ 0.48
PPFIA3-207ENST00000602716 C5orf67F2Z3F1 127 aa18.04■□□□□ 0.48
PPFIA3-207ENST00000602716 MDM4O15151 490 aa18.04■□□□□ 0.48
PPFIA3-207ENST00000602716 EIF3HO15372 352 aaKnown RBP eCLIP18.04■□□□□ 0.48
PPFIA3-207ENST00000602716 MSI1O43347 362 aaKnown RBP18.04■□□□□ 0.48
PPFIA3-207ENST00000602716 YWHAQP27348 245 aa18.04■□□□□ 0.48
PPFIA3-207ENST00000602716 RPL10AP62906 217 aaKnown RBP18.04■□□□□ 0.48
PPFIA3-207ENST00000602716 TRADDQ15628 312 aa18.04■□□□□ 0.48
PPFIA3-207ENST00000602716 HADHQ16836 314 aaKnown RBP18.04■□□□□ 0.48
PPFIA3-207ENST00000602716 SPOCD1Q6ZMY3 1216 aa18.04■□□□□ 0.48
PPFIA3-207ENST00000602716 STRADAQ7RTN6 431 aa18.04■□□□□ 0.48
PPFIA3-207ENST00000602716 KLHL7Q8IXQ5 586 aa18.04■□□□□ 0.48
PPFIA3-207ENST00000602716 EIF1ADQ8N9N8 165 aaKnown RBP18.04■□□□□ 0.48
PPFIA3-207ENST00000602716 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.04■□□□□ 0.48
PPFIA3-207ENST00000602716 KLHL5Q96PQ7 755 aa18.04■□□□□ 0.48
PPFIA3-207ENST00000602716 PBX4Q9BYU1 374 aa18.04■□□□□ 0.48
PPFIA3-207ENST00000602716 WDR6Q9NNW5 1121 aaKnown RBP18.04■□□□□ 0.48
PPFIA3-207ENST00000602716 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.04■□□□□ 0.48
PPFIA3-207ENST00000602716 STAP1Q9ULZ2 295 aa18.04■□□□□ 0.48
PPFIA3-207ENST00000602716 C2orf71A6NGG8 1288 aa18.03■□□□□ 0.48
PPFIA3-207ENST00000602716 HMGA1P17096 107 aaKnown RBP18.03■□□□□ 0.48
PPFIA3-207ENST00000602716 RDXP35241 583 aaKnown RBP18.03■□□□□ 0.48
PPFIA3-207ENST00000602716 ARSEP51690 589 aa18.03■□□□□ 0.48
PPFIA3-207ENST00000602716 TWF1Q12792 350 aa18.03■□□□□ 0.48
PPFIA3-207ENST00000602716 MMRN1Q13201 1228 aa18.03■□□□□ 0.48
PPFIA3-207ENST00000602716 DNAJC21Q5F1R6 531 aaKnown RBP18.03■□□□□ 0.48
PPFIA3-207ENST00000602716 PYROXD2Q8N2H3 581 aa18.03■□□□□ 0.48
PPFIA3-207ENST00000602716 CASP10Q92851 521 aa18.03■□□□□ 0.48
PPFIA3-207ENST00000602716 FAM118BQ9BPY3 351 aa18.03■□□□□ 0.48
PPFIA3-207ENST00000602716 TLR9Q9NR96 1032 aa18.03■□□□□ 0.48
PPFIA3-207ENST00000602716 DDIT4Q9NX09 232 aa18.03■□□□□ 0.48
PPFIA3-207ENST00000602716 SFMBT1Q9UHJ3 866 aa18.03■□□□□ 0.48
PPFIA3-207ENST00000602716 LZTS1Q9Y250 596 aa18.03■□□□□ 0.48
PPFIA3-207ENST00000602716 R3HDM2Q9Y2K5 976 aaKnown RBP18.03■□□□□ 0.48
PPFIA3-207ENST00000602716 INSL5Q9Y5Q6 135 aa18.03■□□□□ 0.48
PPFIA3-207ENST00000602716 BHMG1C9JSJ3 638 aaPredicted RBP18.03■□□□□ 0.48
PPFIA3-207ENST00000602716 KRIT1O00522 736 aa18.03■□□□□ 0.48
PPFIA3-207ENST00000602716 ENDOD1O94919 500 aa18.03■□□□□ 0.48
PPFIA3-207ENST00000602716 KRT14P02533 472 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms