RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 TAF5Q15542 800 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 VPS72Q15906 364 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 PFKFB3Q16875 520 aaPredicted RBP9.14□□□□□ -0.95
COMMD3-215ENST00000602574 MAMDC2Q7Z304 686 aaPredicted RBP9.14□□□□□ -0.95
COMMD3-215ENST00000602574 ZNF589Q86UQ0 364 aaPredicted RBP9.14□□□□□ -0.95
COMMD3-215ENST00000602574 UNC5CLQ8IV45 518 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 BBS7Q8IWZ6 715 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 LIX1Q8N485 282 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 GALNT4Q8N4A0 578 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 OR6C4Q8NGE1 309 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 OR8K3Q8NH51 312 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 PSPC1Q8WXF1 523 aaKnown RBP9.14□□□□□ -0.95
COMMD3-215ENST00000602574 JPH3Q8WXH2 748 aaPredicted RBP9.14□□□□□ -0.95
COMMD3-215ENST00000602574 AHCYL2Q96HN2 611 aaKnown RBP9.14□□□□□ -0.95
COMMD3-215ENST00000602574 B3GALT6Q96L58 329 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 TMEM68Q96MH6 324 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 TGS1Q96RS0 853 aaKnown RBP9.14□□□□□ -0.95
COMMD3-215ENST00000602574 C1orf50Q9BV19 199 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 TLR10Q9BXR5 811 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 ZC3H12CQ9C0D7 883 aaKnown RBP9.14□□□□□ -0.95
COMMD3-215ENST00000602574 TMEM245Q9H330 911 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 NPAP1Q9NZP6 1156 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 ZRANB1Q9UGI0 708 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 TESMINQ9Y4I5 508 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 SLIT1O75093 1534 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 MRC1P22897 1456 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 ADGRA3Q8IWK6 1321 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 A0A0A6YYJ9 748 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 NBPF26B4DH59 902 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 SLCO1B7G3V0H7 640 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 ERVH48-1M5A8F1 160 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 PSMD9O00233 223 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 RASGRF2O14827 1237 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 GYG2O15488 501 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 SNAP91O60641 907 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 JAK2O60674 1132 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 TOM1L1O75674 476 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 SNAP29O95721 258 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 DNAJB1P25685 340 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 POLR2BP30876 1174 aaKnown RBP9.14□□□□□ -0.95
COMMD3-215ENST00000602574 RFC4P35249 363 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 BMXP51813 675 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 NCKAP1LP55160 1127 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 EEF1A1P68104 462 aaKnown RBP9.14□□□□□ -0.95
COMMD3-215ENST00000602574 EEF1A2Q05639 463 aaKnown RBP9.14□□□□□ -0.95
COMMD3-215ENST00000602574 PNOCQ13519 176 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 KYNUQ16719 465 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 RBM20Q5T481 1227 aaKnown RBP9.14□□□□□ -0.95
COMMD3-215ENST00000602574 EEF1A1P5Q5VTE0 462 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 AADACL4Q5VUY2 407 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 FBXL19Q6PCT2 694 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 BNIPLQ7Z465 357 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 SYTL5Q8TDW5 730 aaPredicted RBP9.14□□□□□ -0.95
COMMD3-215ENST00000602574 C10orf82Q8WW14 230 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 JADE3Q92613 823 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 DEPDC7Q96QD5 511 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 BBS4Q96RK4 519 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 NT5C3AQ9H0P0 336 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 ECHDC1Q9NTX5 307 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.14□□□□□ -0.95
COMMD3-215ENST00000602574 KCND2Q9NZV8 630 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 CPNE7Q9UBL6 633 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 ZFP69BQ9UJL9 534 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 DERAQ9Y315 318 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 CBY1Q9Y3M2 126 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 PCDHB12Q9Y5F1 795 aa9.14□□□□□ -0.95
COMMD3-215ENST00000602574 MYO5AQ9Y4I1 1855 aaKnown RBP9.13□□□□□ -0.95
COMMD3-215ENST00000602574 KIF13AQ9H1H9 1805 aa9.13□□□□□ -0.95
COMMD3-215ENST00000602574 A0A1W2PQ72 361 aa9.13□□□□□ -0.95
COMMD3-215ENST00000602574 TXNDC9O14530 226 aa9.13□□□□□ -0.95
COMMD3-215ENST00000602574 NOS1APO75052 506 aaPredicted RBP9.13□□□□□ -0.95
COMMD3-215ENST00000602574 PSIP1O75475 530 aaKnown RBP9.13□□□□□ -0.95
COMMD3-215ENST00000602574 SNX4O95219 450 aa9.13□□□□□ -0.95
COMMD3-215ENST00000602574 CALB1P05937 261 aa9.13□□□□□ -0.95
COMMD3-215ENST00000602574 PRKAR1AP10644 381 aa9.13□□□□□ -0.95
COMMD3-215ENST00000602574 MLLT3P42568 568 aaPredicted RBP9.13□□□□□ -0.95
COMMD3-215ENST00000602574 CLCN4P51793 760 aa9.13□□□□□ -0.95
COMMD3-215ENST00000602574 CYP4F8P98187 520 aa9.13□□□□□ -0.95
COMMD3-215ENST00000602574 MYBPC1Q00872 1141 aa9.13□□□□□ -0.95
COMMD3-215ENST00000602574 SSRP1Q08945 709 aaKnown RBP9.13□□□□□ -0.95
COMMD3-215ENST00000602574 RIPPLY1Q0D2K3 151 aa9.13□□□□□ -0.95
COMMD3-215ENST00000602574 SLC9C2Q5TAH2 1124 aa9.13□□□□□ -0.95
COMMD3-215ENST00000602574 ARHGEF16Q5VV41 709 aa9.13□□□□□ -0.95
COMMD3-215ENST00000602574 MACC1Q6ZN28 852 aa9.13□□□□□ -0.95
COMMD3-215ENST00000602574 JAZF1Q86VZ6 243 aa9.13□□□□□ -0.95
COMMD3-215ENST00000602574 C2CD5Q86YS7 1000 aa9.13□□□□□ -0.95
COMMD3-215ENST00000602574 GLYCTKQ8IVS8 523 aa9.13□□□□□ -0.95
COMMD3-215ENST00000602574 SPATA20Q8TB22 786 aa9.13□□□□□ -0.95
COMMD3-215ENST00000602574 ACTRT1Q8TDG2 376 aa9.13□□□□□ -0.95
COMMD3-215ENST00000602574 EPS8L1Q8TE68 723 aa9.13□□□□□ -0.95
COMMD3-215ENST00000602574 GRK7Q8WTQ7 553 aa9.13□□□□□ -0.95
COMMD3-215ENST00000602574 CNDP2Q96KP4 475 aaKnown RBP9.13□□□□□ -0.95
COMMD3-215ENST00000602574 ZNF341Q9BYN7 854 aa9.13□□□□□ -0.95
COMMD3-215ENST00000602574 GOLPH3Q9H4A6 298 aa9.13□□□□□ -0.95
COMMD3-215ENST00000602574 DHX33Q9H6R0 707 aaKnown RBP9.13□□□□□ -0.95
COMMD3-215ENST00000602574 AZI2Q9H6S1 392 aa9.13□□□□□ -0.95
COMMD3-215ENST00000602574 SLC35C2Q9NQQ7 365 aa9.13□□□□□ -0.95
COMMD3-215ENST00000602574 ZC4H2Q9NQZ6 224 aa9.13□□□□□ -0.95
COMMD3-215ENST00000602574 TBC1D22BQ9NU19 505 aa9.13□□□□□ -0.95
COMMD3-215ENST00000602574 BCAP29Q9UHQ4 241 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms