RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 PNKPQ96T60 521 aa17.48■□□□□ 0.39
SSBP4-213ENST00000602088 PHOX2BQ99453 314 aa17.48■□□□□ 0.39
SSBP4-213ENST00000602088 NLRC4Q9NPP4 1024 aa17.48■□□□□ 0.39
SSBP4-213ENST00000602088 RTN4Q9NQC3 1192 aaKnown RBP17.48■□□□□ 0.39
SSBP4-213ENST00000602088 PRMT8Q9NR22 394 aaPredicted RBP17.48■□□□□ 0.39
SSBP4-213ENST00000602088 MARK1Q9P0L2 795 aa17.48■□□□□ 0.39
SSBP4-213ENST00000602088 TJP2Q9UDY2 1190 aa17.48■□□□□ 0.39
SSBP4-213ENST00000602088 AGO1Q9UL18 857 aaKnown RBP17.48■□□□□ 0.39
SSBP4-213ENST00000602088 TEX33O43247 280 aa17.47■□□□□ 0.39
SSBP4-213ENST00000602088 RNF40O75150 1001 aa17.47■□□□□ 0.39
SSBP4-213ENST00000602088 NBL1P41271 181 aa17.47■□□□□ 0.39
SSBP4-213ENST00000602088 CXCL12P48061 93 aa17.47■□□□□ 0.39
SSBP4-213ENST00000602088 CCR3P51677 355 aa17.47■□□□□ 0.39
SSBP4-213ENST00000602088 MESP2Q0VG99 397 aa17.47■□□□□ 0.39
SSBP4-213ENST00000602088 ANO4Q32M45 955 aa17.47■□□□□ 0.39
SSBP4-213ENST00000602088 NOP9Q86U38 636 aaKnown RBP17.47■□□□□ 0.39
SSBP4-213ENST00000602088 DENND1CQ8IV53 801 aa17.47■□□□□ 0.39
SSBP4-213ENST00000602088 ETFBKMTQ8IXQ9 262 aa17.47■□□□□ 0.39
SSBP4-213ENST00000602088 FAM149B1Q96BN6 582 aa17.47■□□□□ 0.39
SSBP4-213ENST00000602088 CBX8Q9HC52 389 aa17.47■□□□□ 0.39
SSBP4-213ENST00000602088 WDR35Q9P2L0 1181 aa17.47■□□□□ 0.39
SSBP4-213ENST00000602088 ATG2BQ96BY7 2078 aa17.46■□□□□ 0.39
SSBP4-213ENST00000602088 A0A0A0MRY4 1105 aa17.46■□□□□ 0.39
SSBP4-213ENST00000602088 CHURC1-FNTBB4DL54 471 aa17.46■□□□□ 0.39
SSBP4-213ENST00000602088 K7EQS6 105 aa17.46■□□□□ 0.39
SSBP4-213ENST00000602088 TULP3O75386 442 aa17.46■□□□□ 0.39
SSBP4-213ENST00000602088 GFPT2O94808 682 aa17.46■□□□□ 0.39
SSBP4-213ENST00000602088 CAVIN2O95810 425 aa17.46■□□□□ 0.39
SSBP4-213ENST00000602088 TDGF1P13385 188 aa17.46■□□□□ 0.39
SSBP4-213ENST00000602088 NCAM1P13591 858 aa17.46■□□□□ 0.39
SSBP4-213ENST00000602088 CDH5P33151 784 aaPredicted RBP17.46■□□□□ 0.39
SSBP4-213ENST00000602088 SOX5P35711 763 aa17.46■□□□□ 0.39
SSBP4-213ENST00000602088 CHKAP35790 457 aa17.46■□□□□ 0.39
SSBP4-213ENST00000602088 HARS2P49590 506 aaKnown RBP17.46■□□□□ 0.39
SSBP4-213ENST00000602088 YWHAZP63104 245 aaKnown RBP17.46■□□□□ 0.39
SSBP4-213ENST00000602088 SATB1Q01826 763 aa17.46■□□□□ 0.39
SSBP4-213ENST00000602088 SYPL2Q5VXT5 272 aa17.46■□□□□ 0.39
SSBP4-213ENST00000602088 PKN3Q6P5Z2 889 aa17.46■□□□□ 0.39
SSBP4-213ENST00000602088 TSSK4Q6SA08 328 aa17.46■□□□□ 0.39
SSBP4-213ENST00000602088 TPGS1Q6ZTW0 290 aa17.46■□□□□ 0.39
SSBP4-213ENST00000602088 PHTF2Q8N3S3 785 aa17.46■□□□□ 0.39
SSBP4-213ENST00000602088 NAT16Q8N8M0 369 aa17.46■□□□□ 0.39
SSBP4-213ENST00000602088 TMEM35BQ8NCS4 154 aa17.46■□□□□ 0.39
SSBP4-213ENST00000602088 EPS8L1Q8TE68 723 aa17.46■□□□□ 0.39
SSBP4-213ENST00000602088 NELL1Q92832 810 aa17.46■□□□□ 0.39
SSBP4-213ENST00000602088 PIWIL1Q96J94 861 aaKnown RBP17.46■□□□□ 0.39
SSBP4-213ENST00000602088 SPAG5Q96R06 1193 aa17.46■□□□□ 0.39
SSBP4-213ENST00000602088 TRIM62Q9BVG3 475 aa17.46■□□□□ 0.39
SSBP4-213ENST00000602088 BBS2Q9BXC9 721 aa17.46■□□□□ 0.39
SSBP4-213ENST00000602088 PDCL3Q9H2J4 239 aa17.46■□□□□ 0.39
SSBP4-213ENST00000602088 NOCTQ9UK39 431 aaKnown RBP17.46■□□□□ 0.39
SSBP4-213ENST00000602088 NAALADL1Q9UQQ1 740 aa17.46■□□□□ 0.39
SSBP4-213ENST00000602088 CEP83Q9Y592 693 aa17.46■□□□□ 0.39
SSBP4-213ENST00000602088 PIEZO1Q92508 2521 aa17.46■□□□□ 0.38
SSBP4-213ENST00000602088 ZFHX2Q9C0A1 2572 aaPredicted RBP17.45■□□□□ 0.38
SSBP4-213ENST00000602088 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.45■□□□□ 0.38
SSBP4-213ENST00000602088 NEDD8-MDP1E9PL57 170 aa17.45■□□□□ 0.38
SSBP4-213ENST00000602088 MSI1O43347 362 aaKnown RBP17.45■□□□□ 0.38
SSBP4-213ENST00000602088 ATG13O75143 517 aa17.45■□□□□ 0.38
SSBP4-213ENST00000602088 KAT7O95251 611 aa17.45■□□□□ 0.38
SSBP4-213ENST00000602088 PAPSS2O95340 614 aaPredicted RBP17.45■□□□□ 0.38
SSBP4-213ENST00000602088 IGLV3-27P01718 113 aa17.45■□□□□ 0.38
SSBP4-213ENST00000602088 TYRP14679 529 aa17.45■□□□□ 0.38
SSBP4-213ENST00000602088 STAT1P42224 750 aa17.45■□□□□ 0.38
SSBP4-213ENST00000602088 GRIA2P42262 883 aa17.45■□□□□ 0.38
SSBP4-213ENST00000602088 SNX16P57768 344 aa17.45■□□□□ 0.38
SSBP4-213ENST00000602088 PPP2R5DQ14738 602 aa17.45■□□□□ 0.38
SSBP4-213ENST00000602088 TAF5Q15542 800 aa17.45■□□□□ 0.38
SSBP4-213ENST00000602088 PTPN20Q4JDL3 420 aa17.45■□□□□ 0.38
SSBP4-213ENST00000602088 FILIP1LQ4L180 1135 aa17.45■□□□□ 0.38
SSBP4-213ENST00000602088 TAF3Q5VWG9 929 aa17.45■□□□□ 0.38
SSBP4-213ENST00000602088 ZNF677Q86XU0 584 aa17.45■□□□□ 0.38
SSBP4-213ENST00000602088 FAM217AQ8IXS0 508 aa17.45■□□□□ 0.38
SSBP4-213ENST00000602088 CCDC26Q8TAB7 109 aa17.45■□□□□ 0.38
SSBP4-213ENST00000602088 DQX1Q8TE96 717 aaKnown RBP17.45■□□□□ 0.38
SSBP4-213ENST00000602088 NAP1L5Q96NT1 182 aaPredicted RBP17.45■□□□□ 0.38
SSBP4-213ENST00000602088 POPDC2Q9HBU9 364 aa17.45■□□□□ 0.38
SSBP4-213ENST00000602088 ARHGEF4Q9NR80 690 aa17.45■□□□□ 0.38
SSBP4-213ENST00000602088 C2orf42Q9NWW7 574 aa17.45■□□□□ 0.38
SSBP4-213ENST00000602088 DEC1Q9P2X7 70 aa17.45■□□□□ 0.38
SSBP4-213ENST00000602088 MYO15AQ9UKN7 3530 aa17.45■□□□□ 0.38
SSBP4-213ENST00000602088 FRYLO94915 3013 aa17.45■□□□□ 0.38
SSBP4-213ENST00000602088 A0A1B0GTH6 734 aa17.44■□□□□ 0.38
SSBP4-213ENST00000602088 PROB1E7EW31 1015 aa17.44■□□□□ 0.38
SSBP4-213ENST00000602088 CAPN9O14815 690 aa17.44■□□□□ 0.38
SSBP4-213ENST00000602088 CACNG3O60359 315 aa17.44■□□□□ 0.38
SSBP4-213ENST00000602088 LATS1O95835 1130 aa17.44■□□□□ 0.38
SSBP4-213ENST00000602088 ERBB2P04626 1255 aa17.44■□□□□ 0.38
SSBP4-213ENST00000602088 APODP05090 189 aa17.44■□□□□ 0.38
SSBP4-213ENST00000602088 GLI1P08151 1106 aa17.44■□□□□ 0.38
SSBP4-213ENST00000602088 MMEP08473 750 aa17.44■□□□□ 0.38
SSBP4-213ENST00000602088 RING1Q06587 406 aa17.44■□□□□ 0.38
SSBP4-213ENST00000602088 EFHC1Q5JVL4 640 aa17.44■□□□□ 0.38
SSBP4-213ENST00000602088 LUZP1Q86V48 1076 aa17.44■□□□□ 0.38
SSBP4-213ENST00000602088 SFTPA1Q8IWL2 248 aa17.44■□□□□ 0.38
SSBP4-213ENST00000602088 CPXM2Q8N436 756 aa17.44■□□□□ 0.38
SSBP4-213ENST00000602088 P2RY11Q96G91 374 aa17.44■□□□□ 0.38
SSBP4-213ENST00000602088 SERPINB11Q96P15 392 aa17.44■□□□□ 0.38
SSBP4-213ENST00000602088 XPO6Q96QU8 1125 aaKnown RBP17.44■□□□□ 0.38
SSBP4-213ENST00000602088 FAM126AQ9BYI3 521 aaPredicted RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms