RNA–Protein interactions for RNA: ENST00000601392.5

CELF4-222, Transcript of CUGBP Elav-like family member 4, human

TSL 1 (best)

Gene CELF4, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CELF4-222	ENST00000601392	ZXDA	P98168	799 aa		13.32	□□□□□ -0.28
CELF4-222	ENST00000601392	MTMR3	Q13615	1198 aa		13.32	□□□□□ -0.28
CELF4-222	ENST00000601392	VEPH1	Q14D04	833 aa		13.32	□□□□□ -0.28
CELF4-222	ENST00000601392	BOLA3	Q53S33	107 aa		13.32	□□□□□ -0.28
CELF4-222	ENST00000601392	PPM1L	Q5SGD2	360 aa		13.32	□□□□□ -0.28
CELF4-222	ENST00000601392	TRNP1	Q6NT89	227 aa		13.32	□□□□□ -0.28
CELF4-222	ENST00000601392	ITIH5	Q86UX2	942 aa		13.32	□□□□□ -0.28
CELF4-222	ENST00000601392	DEFB106A	Q8N104	65 aa		13.32	□□□□□ -0.28
CELF4-222	ENST00000601392	PLCD3	Q8N3E9	789 aa		13.32	□□□□□ -0.28
CELF4-222	ENST00000601392	TTC9B	Q8N6N2	239 aa		13.32	□□□□□ -0.28
CELF4-222	ENST00000601392	EMC1	Q8N766	993 aa		13.32	□□□□□ -0.28
CELF4-222	ENST00000601392	FAM149B1	Q96BN6	582 aa		13.32	□□□□□ -0.28
CELF4-222	ENST00000601392	BTBD6	Q96KE9	485 aa		13.32	□□□□□ -0.28
CELF4-222	ENST00000601392	CDK5RAP1	Q96SZ6	601 aa	Known RBP	13.32	□□□□□ -0.28
CELF4-222	ENST00000601392	CARD9	Q9H257	536 aa		13.32	□□□□□ -0.28
CELF4-222	ENST00000601392	L2HGDH	Q9H9P8	463 aa		13.32	□□□□□ -0.28
CELF4-222	ENST00000601392	UXT	Q9UBK9	157 aa	Predicted RBP	13.32	□□□□□ -0.28
CELF4-222	ENST00000601392	TTC7A	Q9ULT0	858 aa	Predicted RBP	13.32	□□□□□ -0.28
CELF4-222	ENST00000601392	YIPF1	Q9Y548	306 aa		13.32	□□□□□ -0.28
CELF4-222	ENST00000601392	INSL5	Q9Y5Q6	135 aa		13.32	□□□□□ -0.28
CELF4-222	ENST00000601392	CLUH	O75153	1309 aa		13.32	□□□□□ -0.28
CELF4-222	ENST00000601392	PRRG1	O14668	218 aa		13.31	□□□□□ -0.28
CELF4-222	ENST00000601392	ENC1	O14682	589 aa		13.31	□□□□□ -0.28
CELF4-222	ENST00000601392	CAPN9	O14815	690 aa		13.31	□□□□□ -0.28
CELF4-222	ENST00000601392	DDX3Y	O15523	660 aa	Known RBP	13.31	□□□□□ -0.28
CELF4-222	ENST00000601392	LRCH4	O75427	683 aa		13.31	□□□□□ -0.28
CELF4-222	ENST00000601392	ZMYND10	O75800	440 aa		13.31	□□□□□ -0.28
CELF4-222	ENST00000601392	C8A	P07357	584 aa		13.31	□□□□□ -0.28
CELF4-222	ENST00000601392	HMGA1	P17096	107 aa	Known RBP	13.31	□□□□□ -0.28
CELF4-222	ENST00000601392	GBP2	P32456	591 aa	Predicted RBP	13.31	□□□□□ -0.28
CELF4-222	ENST00000601392	GPR15	P49685	360 aa		13.31	□□□□□ -0.28
CELF4-222	ENST00000601392	AIF1	P55008	147 aa		13.31	□□□□□ -0.28
CELF4-222	ENST00000601392	RWDD2B	P57060	319 aa		13.31	□□□□□ -0.28
CELF4-222	ENST00000601392	EIF4EBP2	Q13542	120 aa	Predicted RBP	13.31	□□□□□ -0.28
CELF4-222	ENST00000601392	PABPC1L	Q4VXU2	614 aa	Known RBP	13.31	□□□□□ -0.28
CELF4-222	ENST00000601392	BTBD8	Q5XKL5	378 aa		13.31	□□□□□ -0.28
CELF4-222	ENST00000601392	TRIM67	Q6ZTA4	783 aa		13.31	□□□□□ -0.28
CELF4-222	ENST00000601392	SCD5	Q86SK9	330 aa		13.31	□□□□□ -0.28
CELF4-222	ENST00000601392	PSTK	Q8IV42	348 aa	Known RBP	13.31	□□□□□ -0.28
CELF4-222	ENST00000601392	ZDHHC14	Q8IZN3	488 aa		13.31	□□□□□ -0.28
CELF4-222	ENST00000601392	ARFGAP1	Q8N6T3	406 aa		13.31	□□□□□ -0.28
CELF4-222	ENST00000601392	MYRIP	Q8NFW9	859 aa		13.31	□□□□□ -0.28
CELF4-222	ENST00000601392	PSMG2	Q969U7	264 aa		13.31	□□□□□ -0.28
CELF4-222	ENST00000601392	CFAP57	Q96MR6	1250 aa		13.31	□□□□□ -0.28
CELF4-222	ENST00000601392	SLITRK1	Q96PX8	696 aa		13.31	□□□□□ -0.28
CELF4-222	ENST00000601392	OSBPL9	Q96SU4	736 aa		13.31	□□□□□ -0.28
CELF4-222	ENST00000601392	TBCB	Q99426	244 aa		13.31	□□□□□ -0.28
CELF4-222	ENST00000601392	PRKD2	Q9BZL6	878 aa		13.31	□□□□□ -0.28
CELF4-222	ENST00000601392	TLR8	Q9NR97	1041 aa	Known RBP	13.31	□□□□□ -0.28
CELF4-222	ENST00000601392	OLA1	Q9NTK5	396 aa	Known RBP	13.31	□□□□□ -0.28
CELF4-222	ENST00000601392	DDX56	Q9NY93	547 aa	Known RBP	13.31	□□□□□ -0.28
CELF4-222	ENST00000601392	RAPGEFL1	Q9UHV5	662 aa		13.31	□□□□□ -0.28
CELF4-222	ENST00000601392	CDC23	Q9UJX2	597 aa		13.31	□□□□□ -0.28
CELF4-222	ENST00000601392	SORCS3	Q9UPU3	1222 aa		13.31	□□□□□ -0.28
CELF4-222	ENST00000601392	TMEM221	A6NGB7	291 aa		13.3	□□□□□ -0.28
CELF4-222	ENST00000601392		M0R296	226 aa		13.3	□□□□□ -0.28
CELF4-222	ENST00000601392	XYLB	O75191	536 aa		13.3	□□□□□ -0.28
CELF4-222	ENST00000601392	GRAP2	O75791	330 aa		13.3	□□□□□ -0.28
CELF4-222	ENST00000601392	URI1	O94763	535 aa	Predicted RBP	13.3	□□□□□ -0.28
CELF4-222	ENST00000601392	HNRNPA1	P09651	372 aa	Known RBP eCLIP	13.3	□□□□□ -0.28
CELF4-222	ENST00000601392	RALA	P11233	206 aa		13.3	□□□□□ -0.28
CELF4-222	ENST00000601392	NCAM1	P13591	858 aa		13.3	□□□□□ -0.28
CELF4-222	ENST00000601392	GBP1	P32455	592 aa		13.3	□□□□□ -0.28
CELF4-222	ENST00000601392	COPS2	P61201	443 aa		13.3	□□□□□ -0.28
CELF4-222	ENST00000601392	SIGLEC14	Q08ET2	396 aa		13.3	□□□□□ -0.28
CELF4-222	ENST00000601392	DCAF6	Q58WW2	860 aa		13.3	□□□□□ -0.28
CELF4-222	ENST00000601392	SYPL2	Q5VXT5	272 aa		13.3	□□□□□ -0.28
CELF4-222	ENST00000601392	MSANTD2	Q6P1R3	559 aa		13.3	□□□□□ -0.28
CELF4-222	ENST00000601392	KLHDC10	Q6PID8	442 aa		13.3	□□□□□ -0.28
CELF4-222	ENST00000601392	HFE2	Q6ZVN8	426 aa		13.3	□□□□□ -0.28
CELF4-222	ENST00000601392	TADA2B	Q86TJ2	420 aa		13.3	□□□□□ -0.28
CELF4-222	ENST00000601392	VSIG1	Q86XK7	387 aa		13.3	□□□□□ -0.28
CELF4-222	ENST00000601392	KATNAL2	Q8IYT4	538 aa		13.3	□□□□□ -0.28
CELF4-222	ENST00000601392	RASGEF1C	Q8N431	466 aa		13.3	□□□□□ -0.28
CELF4-222	ENST00000601392	SLC7A14	Q8TBB6	771 aa		13.3	□□□□□ -0.28
CELF4-222	ENST00000601392	TEKT4	Q8WW24	435 aa		13.3	□□□□□ -0.28
CELF4-222	ENST00000601392	NDRG1	Q92597	394 aa	Known RBP	13.3	□□□□□ -0.28
CELF4-222	ENST00000601392	FBXO32	Q969P5	355 aa		13.3	□□□□□ -0.28
CELF4-222	ENST00000601392	GOLPH3	Q9H4A6	298 aa		13.3	□□□□□ -0.28
CELF4-222	ENST00000601392	WDR6	Q9NNW5	1121 aa	Known RBP	13.3	□□□□□ -0.28
CELF4-222	ENST00000601392	LIMD1	Q9UGP4	676 aa		13.3	□□□□□ -0.28
CELF4-222	ENST00000601392	USP18	Q9UMW8	372 aa		13.3	□□□□□ -0.28
CELF4-222	ENST00000601392	NAALADL1	Q9UQQ1	740 aa		13.3	□□□□□ -0.28
CELF4-222	ENST00000601392	PTPRD	P23468	1912 aa		13.3	□□□□□ -0.28
CELF4-222	ENST00000601392	SOBP	A7XYQ1	873 aa		13.29	□□□□□ -0.28
CELF4-222	ENST00000601392	TMEM110-MUSTN1	A8MSY1	372 aa		13.29	□□□□□ -0.28
CELF4-222	ENST00000601392	SOAT2	O75908	522 aa		13.29	□□□□□ -0.28
CELF4-222	ENST00000601392	ZRANB2	O95218	330 aa	Known RBP eCLIP	13.29	□□□□□ -0.28
CELF4-222	ENST00000601392	TRUB2	O95900	331 aa	Known RBP	13.29	□□□□□ -0.28
CELF4-222	ENST00000601392	IGLV3-25	P01717	112 aa		13.29	□□□□□ -0.28
CELF4-222	ENST00000601392	ASGR2	P07307	311 aa		13.29	□□□□□ -0.28
CELF4-222	ENST00000601392	PFKL	P17858	780 aa		13.29	□□□□□ -0.28
CELF4-222	ENST00000601392	MIP	P30301	263 aa		13.29	□□□□□ -0.28
CELF4-222	ENST00000601392	RDX	P35241	583 aa	Known RBP	13.29	□□□□□ -0.28
CELF4-222	ENST00000601392	TUB	P50607	506 aa		13.29	□□□□□ -0.28
CELF4-222	ENST00000601392	CDR1	P51861	262 aa		13.29	□□□□□ -0.28
CELF4-222	ENST00000601392	USP46	P62068	366 aa		13.29	□□□□□ -0.28
CELF4-222	ENST00000601392	SLC25A11	Q02978	314 aa	Known RBP	13.29	□□□□□ -0.28
CELF4-222	ENST00000601392	TWF1	Q12792	350 aa		13.29	□□□□□ -0.28
CELF4-222	ENST00000601392	TAF10	Q12962	218 aa		13.29	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms