RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 MAIP1Q8WWC4 291 aa23.49■■□□□ 1.35
IRF3-228ENST00000601291 PLEKHA4Q9H4M7 779 aa23.49■■□□□ 1.35
IRF3-228ENST00000601291 DPP7Q9UHL4 492 aa23.49■■□□□ 1.35
IRF3-228ENST00000601291 AP4E1Q9UPM8 1137 aa23.49■■□□□ 1.35
IRF3-228ENST00000601291 GOLGA6L10A0A0M3HER8 536 aa23.48■■□□□ 1.35
IRF3-228ENST00000601291 KRIT1O00522 736 aa23.48■■□□□ 1.35
IRF3-228ENST00000601291 IRAK2O43187 625 aa23.48■■□□□ 1.35
IRF3-228ENST00000601291 CLASP2O75122 1294 aaKnown RBP23.48■■□□□ 1.35
IRF3-228ENST00000601291 KDELR1P24390 212 aa23.48■■□□□ 1.35
IRF3-228ENST00000601291 PTPN7P35236 360 aa23.48■■□□□ 1.35
IRF3-228ENST00000601291 CDH6P55285 790 aa23.48■■□□□ 1.35
IRF3-228ENST00000601291 PPP2R5EQ16537 467 aa23.48■■□□□ 1.35
IRF3-228ENST00000601291 TFDP3Q5H9I0 405 aa23.48■■□□□ 1.35
IRF3-228ENST00000601291 PPM1LQ5SGD2 360 aa23.48■■□□□ 1.35
IRF3-228ENST00000601291 SNX30Q5VWJ9 437 aa23.48■■□□□ 1.35
IRF3-228ENST00000601291 ELMSAN1Q6PJG2 1045 aa23.48■■□□□ 1.35
IRF3-228ENST00000601291 MFSD7Q6UXD7 560 aa23.48■■□□□ 1.35
IRF3-228ENST00000601291 CASP10Q92851 521 aa23.48■■□□□ 1.35
IRF3-228ENST00000601291 RNF34Q969K3 372 aa23.48■■□□□ 1.35
IRF3-228ENST00000601291 NTAN1Q96AB6 310 aa23.48■■□□□ 1.35
IRF3-228ENST00000601291 OSBPL8Q9BZF1 889 aa23.48■■□□□ 1.35
IRF3-228ENST00000601291 WDCPQ9H6R7 721 aa23.48■■□□□ 1.35
IRF3-228ENST00000601291 WDR6Q9NNW5 1121 aaKnown RBP23.48■■□□□ 1.35
IRF3-228ENST00000601291 CXCR3P49682 368 aa23.48■■□□□ 1.35
IRF3-228ENST00000601291 SMAD3P84022 425 aaKnown RBP23.48■■□□□ 1.35
IRF3-228ENST00000601291 EFHC2Q5JST6 749 aa23.48■■□□□ 1.35
IRF3-228ENST00000601291 C10orf120Q5SQS8 335 aa23.48■■□□□ 1.35
IRF3-228ENST00000601291 ZNF276Q8N554 614 aa23.48■■□□□ 1.35
IRF3-228ENST00000601291 MYRIPQ8NFW9 859 aa23.48■■□□□ 1.35
IRF3-228ENST00000601291 GDPD5Q8WTR4 605 aa23.48■■□□□ 1.35
IRF3-228ENST00000601291 TIFAQ96CG3 184 aa23.48■■□□□ 1.35
IRF3-228ENST00000601291 CALN1Q9BXU9 219 aa23.48■■□□□ 1.35
IRF3-228ENST00000601291 MAN1C1Q9NR34 630 aa23.48■■□□□ 1.35
IRF3-228ENST00000601291 SFMBT1Q9UHJ3 866 aa23.48■■□□□ 1.35
IRF3-228ENST00000601291 NUDT5Q9UKK9 219 aa23.48■■□□□ 1.35
IRF3-228ENST00000601291 FZD10Q9ULW2 581 aa23.48■■□□□ 1.35
IRF3-228ENST00000601291 C3orf70A6NLC5 250 aaPredicted RBP23.47■■□□□ 1.35
IRF3-228ENST00000601291 EFCAB8A8MWE9 144 aa23.47■■□□□ 1.35
IRF3-228ENST00000601291 TLR5O60602 858 aa23.47■■□□□ 1.35
IRF3-228ENST00000601291 CDKN2BP42772 138 aa23.47■■□□□ 1.35
IRF3-228ENST00000601291 RGS19P49795 217 aa23.47■■□□□ 1.35
IRF3-228ENST00000601291 TUBB4BP68371 445 aa23.47■■□□□ 1.35
IRF3-228ENST00000601291 DPYSL2Q16555 572 aa23.47■■□□□ 1.35
IRF3-228ENST00000601291 VSIG1Q86XK7 387 aa23.47■■□□□ 1.35
IRF3-228ENST00000601291 HDAC7Q8WUI4 952 aa23.47■■□□□ 1.35
IRF3-228ENST00000601291 DHX35Q9H5Z1 703 aaKnown RBP23.47■■□□□ 1.35
IRF3-228ENST00000601291 GPATCH2LQ9NWQ4 482 aa23.47■■□□□ 1.35
IRF3-228ENST00000601291 ZNF840PA6NDX5 716 aa23.46■■□□□ 1.35
IRF3-228ENST00000601291 CCDC188H7C350 402 aa23.46■■□□□ 1.35
IRF3-228ENST00000601291 CCR1P32246 355 aa23.46■■□□□ 1.35
IRF3-228ENST00000601291 C2orf54Q08AI8 447 aa23.46■■□□□ 1.35
IRF3-228ENST00000601291 SCAPQ12770 1279 aa23.46■■□□□ 1.35
IRF3-228ENST00000601291 EFEMP1Q12805 493 aa23.46■■□□□ 1.35
IRF3-228ENST00000601291 NNTQ13423 1086 aa23.46■■□□□ 1.35
IRF3-228ENST00000601291 PABPC1LQ4VXU2 614 aaKnown RBP23.46■■□□□ 1.35
IRF3-228ENST00000601291 ZC3H12AQ5D1E8 599 aaKnown RBP23.46■■□□□ 1.35
IRF3-228ENST00000601291 BRMS1LQ5PSV4 323 aa23.46■■□□□ 1.35
IRF3-228ENST00000601291 LRRN4CLQ8ND94 238 aa23.46■■□□□ 1.35
IRF3-228ENST00000601291 AP1M1Q9BXS5 423 aa23.46■■□□□ 1.35
IRF3-228ENST00000601291 TLR6Q9Y2C9 796 aa23.46■■□□□ 1.35
IRF3-228ENST00000601291 EFR3BQ9Y2G0 817 aa23.46■■□□□ 1.35
IRF3-228ENST00000601291 ZNF638Q14966 1978 aaKnown RBP23.45■■□□□ 1.35
IRF3-228ENST00000601291 hCG_1818297A0A087WSY0 165 aa23.45■■□□□ 1.34
IRF3-228ENST00000601291 MSI1O43347 362 aaKnown RBP23.45■■□□□ 1.34
IRF3-228ENST00000601291 TADA3O75528 432 aa23.45■■□□□ 1.34
IRF3-228ENST00000601291 ZMYND10O75800 440 aa23.45■■□□□ 1.34
IRF3-228ENST00000601291 TJP3O95049 919 aa23.45■■□□□ 1.34
IRF3-228ENST00000601291 ADRA1BP35368 520 aa23.45■■□□□ 1.34
IRF3-228ENST00000601291 TUBP50607 506 aa23.45■■□□□ 1.34
IRF3-228ENST00000601291 EIF4EBP2Q13542 120 aaPredicted RBP23.45■■□□□ 1.34
IRF3-228ENST00000601291 HECTD3Q5T447 861 aa23.45■■□□□ 1.34
IRF3-228ENST00000601291 CHRDL2Q6WN34 429 aa23.45■■□□□ 1.34
IRF3-228ENST00000601291 ADAT2Q7Z6V5 191 aaKnown RBP23.45■■□□□ 1.34
IRF3-228ENST00000601291 HEMGNQ9BXL5 484 aa23.45■■□□□ 1.34
IRF3-228ENST00000601291 NACA2Q9H009 215 aa23.45■■□□□ 1.34
IRF3-228ENST00000601291 CCSER2Q9H7U1 834 aa23.45■■□□□ 1.34
IRF3-228ENST00000601291 PCDH18Q9HCL0 1135 aa23.45■■□□□ 1.34
IRF3-228ENST00000601291 MARCH2Q9P0N8 246 aa23.45■■□□□ 1.34
IRF3-228ENST00000601291 RASAL2Q9UJF2 1139 aa23.45■■□□□ 1.34
IRF3-228ENST00000601291 CD48P09326 243 aa23.44■■□□□ 1.34
IRF3-228ENST00000601291 SLC2A3P11169 496 aa23.44■■□□□ 1.34
IRF3-228ENST00000601291 EPCAMP16422 314 aa23.44■■□□□ 1.34
IRF3-228ENST00000601291 HOXA9P31269 272 aa23.44■■□□□ 1.34
IRF3-228ENST00000601291 ARSEP51690 589 aa23.44■■□□□ 1.34
IRF3-228ENST00000601291 DPYSL3Q14195 570 aa23.44■■□□□ 1.34
IRF3-228ENST00000601291 PPP2R5DQ14738 602 aa23.44■■□□□ 1.34
IRF3-228ENST00000601291 LLGL1Q15334 1064 aa23.44■■□□□ 1.34
IRF3-228ENST00000601291 TAZQ16635 292 aa23.44■■□□□ 1.34
IRF3-228ENST00000601291 CA9Q16790 459 aa23.44■■□□□ 1.34
IRF3-228ENST00000601291 PPP6R3Q5H9R7 873 aaPredicted RBP23.44■■□□□ 1.34
IRF3-228ENST00000601291 KAZNQ674X7 775 aa23.44■■□□□ 1.34
IRF3-228ENST00000601291 FAM71BQ8TC56 605 aa23.44■■□□□ 1.34
IRF3-228ENST00000601291 SLC22A17Q8WUG5 538 aa23.44■■□□□ 1.34
IRF3-228ENST00000601291 ZNF670Q9BS34 389 aa23.44■■□□□ 1.34
IRF3-228ENST00000601291 MAK16Q9BXY0 300 aaKnown RBP23.44■■□□□ 1.34
IRF3-228ENST00000601291 TKTL2Q9H0I9 626 aa23.44■■□□□ 1.34
IRF3-228ENST00000601291 RBM12Q9NTZ6 932 aaKnown RBP23.44■■□□□ 1.34
IRF3-228ENST00000601291 ZNF487B1APH4 448 aa23.44■■□□□ 1.34
IRF3-228ENST00000601291 KRT10P13645 584 aa23.44■■□□□ 1.34
IRF3-228ENST00000601291 L1CAMP32004 1257 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms