RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 ZFP37Q9Y6Q3 630 aaPredicted RBP20.89■□□□□ 0.93
SHKBP1-222ENST00000600320 SCINQ9Y6U3 715 aa20.89■□□□□ 0.93
SHKBP1-222ENST00000600320 TMEM191CA6NGB0 347 aa20.88■□□□□ 0.93
SHKBP1-222ENST00000600320 TRUB2O95900 331 aaKnown RBP20.88■□□□□ 0.93
SHKBP1-222ENST00000600320 BMP1P13497 986 aa20.88■□□□□ 0.93
SHKBP1-222ENST00000600320 GPD1P21695 349 aa20.88■□□□□ 0.93
SHKBP1-222ENST00000600320 SULT1E1P49888 294 aa20.88■□□□□ 0.93
SHKBP1-222ENST00000600320 ZNF252P-AS1Q0IIN9 211 aa20.88■□□□□ 0.93
SHKBP1-222ENST00000600320 C15orf59Q2T9L4 293 aaPredicted RBP20.88■□□□□ 0.93
SHKBP1-222ENST00000600320 CCDC14Q49A88 953 aa20.88■□□□□ 0.93
SHKBP1-222ENST00000600320 RAB6CQ53S08 254 aa20.88■□□□□ 0.93
SHKBP1-222ENST00000600320 TANGO2Q6ICL3 276 aa20.88■□□□□ 0.93
SHKBP1-222ENST00000600320 DCUN1D2Q6PH85 259 aa20.88■□□□□ 0.93
SHKBP1-222ENST00000600320 PARM1Q6UWI2 310 aa20.88■□□□□ 0.93
SHKBP1-222ENST00000600320 FGF14Q92915 247 aa20.88■□□□□ 0.93
SHKBP1-222ENST00000600320 NT5C3BQ969T7 300 aa20.88■□□□□ 0.93
SHKBP1-222ENST00000600320 ASB2Q96Q27 587 aa20.88■□□□□ 0.93
SHKBP1-222ENST00000600320 TBCBQ99426 244 aa20.88■□□□□ 0.93
SHKBP1-222ENST00000600320 RPP25Q9BUL9 199 aaKnown RBP20.88■□□□□ 0.93
SHKBP1-222ENST00000600320 RAB6CQ9H0N0 254 aa20.88■□□□□ 0.93
SHKBP1-222ENST00000600320 TRPV4Q9HBA0 871 aa20.88■□□□□ 0.93
SHKBP1-222ENST00000600320 TDP1Q9NUW8 608 aa20.88■□□□□ 0.93
SHKBP1-222ENST00000600320 ADGRG1Q9Y653 693 aa20.88■□□□□ 0.93
SHKBP1-222ENST00000600320 HELZP42694 1942 aaKnown RBP20.88■□□□□ 0.93
SHKBP1-222ENST00000600320 LOC730098B7Z3J9 87 aa20.87■□□□□ 0.93
SHKBP1-222ENST00000600320 LEFTY2O00292 366 aa20.87■□□□□ 0.93
SHKBP1-222ENST00000600320 DPYSL4O14531 572 aa20.87■□□□□ 0.93
SHKBP1-222ENST00000600320 IRAK2O43187 625 aa20.87■□□□□ 0.93
SHKBP1-222ENST00000600320 IPO7O95373 1038 aaKnown RBP20.87■□□□□ 0.93
SHKBP1-222ENST00000600320 HMBSP08397 361 aa20.87■□□□□ 0.93
SHKBP1-222ENST00000600320 PDGFRAP16234 1089 aa20.87■□□□□ 0.93
SHKBP1-222ENST00000600320 USP4Q13107 963 aa20.87■□□□□ 0.93
SHKBP1-222ENST00000600320 EIF4EBP2Q13542 120 aaPredicted RBP20.87■□□□□ 0.93
SHKBP1-222ENST00000600320 SH3PXD2AQ5TCZ1 1133 aa20.87■□□□□ 0.93
SHKBP1-222ENST00000600320 BNIPLQ7Z465 357 aa20.87■□□□□ 0.93
SHKBP1-222ENST00000600320 ZDHHC14Q8IZN3 488 aa20.87■□□□□ 0.93
SHKBP1-222ENST00000600320 SH3RF2Q8TEC5 729 aa20.87■□□□□ 0.93
SHKBP1-222ENST00000600320 BTBD6Q96KE9 485 aa20.87■□□□□ 0.93
SHKBP1-222ENST00000600320 KXD1Q9BQD3 176 aa20.87■□□□□ 0.93
SHKBP1-222ENST00000600320 PLA2G2FQ9BZM2 168 aa20.87■□□□□ 0.93
SHKBP1-222ENST00000600320 FAM204AQ9H8W3 233 aa20.87■□□□□ 0.93
SHKBP1-222ENST00000600320 MRPL47Q9HD33 250 aaKnown RBP20.87■□□□□ 0.93
SHKBP1-222ENST00000600320 OSGEPQ9NPF4 335 aa20.87■□□□□ 0.93
SHKBP1-222ENST00000600320 STAP1Q9ULZ2 295 aa20.87■□□□□ 0.93
SHKBP1-222ENST00000600320 NR2E1Q9Y466 385 aa20.87■□□□□ 0.93
SHKBP1-222ENST00000600320 SYNJ2BP-COX16A0A087WUM0 186 aa20.86■□□□□ 0.93
SHKBP1-222ENST00000600320 HEPACAM2A8MVW5 462 aa20.86■□□□□ 0.93
SHKBP1-222ENST00000600320 ANHXE9PGG2 379 aa20.86■□□□□ 0.93
SHKBP1-222ENST00000600320 M0QYT0 321 aa20.86■□□□□ 0.93
SHKBP1-222ENST00000600320 SCAMP3O14828 347 aaKnown RBP20.86■□□□□ 0.93
SHKBP1-222ENST00000600320 CCP110O43303 1012 aa20.86■□□□□ 0.93
SHKBP1-222ENST00000600320 IRF1P10914 325 aa20.86■□□□□ 0.93
SHKBP1-222ENST00000600320 SDC4P31431 198 aa20.86■□□□□ 0.93
SHKBP1-222ENST00000600320 VAV2P52735 878 aa20.86■□□□□ 0.93
SHKBP1-222ENST00000600320 ATXN1P54253 815 aaKnown RBP20.86■□□□□ 0.93
SHKBP1-222ENST00000600320 ATP11AP98196 1134 aa20.86■□□□□ 0.93
SHKBP1-222ENST00000600320 ZP2Q05996 745 aa20.86■□□□□ 0.93
SHKBP1-222ENST00000600320 HTR4Q13639 388 aa20.86■□□□□ 0.93
SHKBP1-222ENST00000600320 ZNF77Q15935 545 aa20.86■□□□□ 0.93
SHKBP1-222ENST00000600320 SLC25A52Q3SY17 297 aa20.86■□□□□ 0.93
SHKBP1-222ENST00000600320 ZNF564Q8TBZ8 553 aaPredicted RBP20.86■□□□□ 0.93
SHKBP1-222ENST00000600320 RSAD2Q8WXG1 361 aa20.86■□□□□ 0.93
SHKBP1-222ENST00000600320 FCRL2Q96LA5 508 aaPredicted RBP20.86■□□□□ 0.93
SHKBP1-222ENST00000600320 LACRTQ9GZZ8 138 aa20.86■□□□□ 0.93
SHKBP1-222ENST00000600320 ZFP14Q9HCL3 533 aa20.86■□□□□ 0.93
SHKBP1-222ENST00000600320 DDIT4Q9NX09 232 aa20.86■□□□□ 0.93
SHKBP1-222ENST00000600320 COX16Q9P0S2 106 aa20.86■□□□□ 0.93
SHKBP1-222ENST00000600320 CTTNBP2NLQ9P2B4 639 aa20.86■□□□□ 0.93
SHKBP1-222ENST00000600320 CFAP97Q9P2B7 532 aa20.86■□□□□ 0.93
SHKBP1-222ENST00000600320 GREM1O60565 184 aa20.85■□□□□ 0.93
SHKBP1-222ENST00000600320 STC2O76061 302 aa20.85■□□□□ 0.93
SHKBP1-222ENST00000600320 TCF3P15923 654 aa20.85■□□□□ 0.93
SHKBP1-222ENST00000600320 PTPN9P43378 593 aa20.85■□□□□ 0.93
SHKBP1-222ENST00000600320 ZNF143P52747 638 aaPredicted RBP20.85■□□□□ 0.93
SHKBP1-222ENST00000600320 TBX4P57082 545 aa20.85■□□□□ 0.93
SHKBP1-222ENST00000600320 KRT83P78385 493 aa20.85■□□□□ 0.93
SHKBP1-222ENST00000600320 NME3Q13232 169 aa20.85■□□□□ 0.93
SHKBP1-222ENST00000600320 TRIP4Q15650 581 aaPredicted RBP20.85■□□□□ 0.93
SHKBP1-222ENST00000600320 CDO1Q16878 200 aa20.85■□□□□ 0.93
SHKBP1-222ENST00000600320 VITQ6UXI7 678 aa20.85■□□□□ 0.93
SHKBP1-222ENST00000600320 KIAA1328Q86T90 577 aa20.85■□□□□ 0.93
SHKBP1-222ENST00000600320 ADHFE1Q8IWW8 467 aa20.85■□□□□ 0.93
SHKBP1-222ENST00000600320 CELF5Q8N6W0 485 aaKnown RBP20.85■□□□□ 0.93
SHKBP1-222ENST00000600320 TTC16Q8NEE8 873 aa20.85■□□□□ 0.93
SHKBP1-222ENST00000600320 SLC35G2Q8TBE7 412 aa20.85■□□□□ 0.93
SHKBP1-222ENST00000600320 RFFLQ8WZ73 363 aa20.85■□□□□ 0.93
SHKBP1-222ENST00000600320 SLC39A13Q96H72 371 aa20.85■□□□□ 0.93
SHKBP1-222ENST00000600320 SERPINB11Q96P15 392 aa20.85■□□□□ 0.93
SHKBP1-222ENST00000600320 KIF9Q9HAQ2 790 aa20.85■□□□□ 0.93
SHKBP1-222ENST00000600320 LUC7LQ9NQ29 371 aaKnown RBP20.85■□□□□ 0.93
SHKBP1-222ENST00000600320 RRN3Q9NYV6 651 aa20.85■□□□□ 0.93
SHKBP1-222ENST00000600320 UVRAGQ9P2Y5 699 aa20.85■□□□□ 0.93
SHKBP1-222ENST00000600320 LIMD1Q9UGP4 676 aa20.85■□□□□ 0.93
SHKBP1-222ENST00000600320 ANAPC7Q9UJX3 599 aa20.85■□□□□ 0.93
SHKBP1-222ENST00000600320 HBS1LQ9Y450 684 aaKnown RBP20.85■□□□□ 0.93
SHKBP1-222ENST00000600320 NUMBLQ9Y6R0 609 aa20.85■□□□□ 0.93
SHKBP1-222ENST00000600320 TCF20Q9UGU0 1960 aaKnown RBP20.85■□□□□ 0.93
SHKBP1-222ENST00000600320 SPTBN5Q9NRC6 3674 aaKnown RBP20.84■□□□□ 0.93
SHKBP1-222ENST00000600320 PJA2O43164 708 aa20.84■□□□□ 0.93
SHKBP1-222ENST00000600320 NRDCO43847 1150 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms