RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 STC2O76061 302 aa19.66■□□□□ 0.74
PNKP-213ENST00000599543 WASP42768 502 aa19.66■□□□□ 0.74
PNKP-213ENST00000599543 DGKGP49619 791 aa19.66■□□□□ 0.74
PNKP-213ENST00000599543 COG7P83436 770 aa19.66■□□□□ 0.74
PNKP-213ENST00000599543 LRRC63Q05C16 580 aa19.66■□□□□ 0.74
PNKP-213ENST00000599543 EGFLAMQ63HQ2 1017 aa19.66■□□□□ 0.74
PNKP-213ENST00000599543 ARHGAP17Q68EM7 881 aa19.66■□□□□ 0.74
PNKP-213ENST00000599543 RSRC2Q7L4I2 434 aaKnown RBP19.66■□□□□ 0.74
PNKP-213ENST00000599543 ARMCX6Q7L4S7 300 aa19.66■□□□□ 0.74
PNKP-213ENST00000599543 PIGZQ86VD9 579 aa19.66■□□□□ 0.74
PNKP-213ENST00000599543 ARHGAP18Q8N392 663 aa19.66■□□□□ 0.74
PNKP-213ENST00000599543 PIGKQ92643 395 aa19.66■□□□□ 0.74
PNKP-213ENST00000599543 DHTKD1Q96HY7 919 aaPredicted RBP19.66■□□□□ 0.74
PNKP-213ENST00000599543 LSM14BQ9BX40 385 aaKnown RBP19.66■□□□□ 0.74
PNKP-213ENST00000599543 UBXN6Q9BZV1 441 aa19.66■□□□□ 0.74
PNKP-213ENST00000599543 ZNF510Q9Y2H8 683 aa19.66■□□□□ 0.74
PNKP-213ENST00000599543 CEP295Q9C0D2 2601 aa19.66■□□□□ 0.74
PNKP-213ENST00000599543 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.65■□□□□ 0.74
PNKP-213ENST00000599543 C4orf47A7E2U8 309 aa19.65■□□□□ 0.74
PNKP-213ENST00000599543 EFEMP1Q12805 493 aa19.65■□□□□ 0.74
PNKP-213ENST00000599543 CUL2Q13617 745 aa19.65■□□□□ 0.74
PNKP-213ENST00000599543 MAP7D1Q3KQU3 841 aa19.65■□□□□ 0.74
PNKP-213ENST00000599543 DAB2IPQ5VWQ8 1189 aa19.65■□□□□ 0.74
PNKP-213ENST00000599543 TOGARAM2Q6ZUX3 1019 aa19.65■□□□□ 0.74
PNKP-213ENST00000599543 TMEFF1Q8IYR6 380 aa19.65■□□□□ 0.74
PNKP-213ENST00000599543 FRMD1Q8N878 549 aa19.65■□□□□ 0.74
PNKP-213ENST00000599543 ANKRD52Q8NB46 1076 aa19.65■□□□□ 0.74
PNKP-213ENST00000599543 TATDN2Q93075 761 aa19.65■□□□□ 0.74
PNKP-213ENST00000599543 GTPBP4Q9BZE4 634 aaKnown RBP19.65■□□□□ 0.74
PNKP-213ENST00000599543 TMEM9BQ9NQ34 198 aa19.65■□□□□ 0.74
PNKP-213ENST00000599543 PLK2Q9NYY3 685 aa19.65■□□□□ 0.74
PNKP-213ENST00000599543 ARMCX3Q9UH62 379 aaPredicted RBP19.65■□□□□ 0.74
PNKP-213ENST00000599543 MBD1Q9UIS9 605 aaPredicted RBP19.65■□□□□ 0.74
PNKP-213ENST00000599543 HCN2Q9UL51 889 aa19.65■□□□□ 0.74
PNKP-213ENST00000599543 STRIP2Q9ULQ0 834 aa19.65■□□□□ 0.74
PNKP-213ENST00000599543 PATE3B3GLJ2 98 aa19.64■□□□□ 0.73
PNKP-213ENST00000599543 PRRT4C9JH25 899 aa19.64■□□□□ 0.73
PNKP-213ENST00000599543 HMBSP08397 361 aa19.64■□□□□ 0.73
PNKP-213ENST00000599543 GABRG2P18507 467 aa19.64■□□□□ 0.73
PNKP-213ENST00000599543 CHKAP35790 457 aa19.64■□□□□ 0.73
PNKP-213ENST00000599543 PTGER3P43115 390 aa19.64■□□□□ 0.73
PNKP-213ENST00000599543 TKTL1P51854 596 aa19.64■□□□□ 0.73
PNKP-213ENST00000599543 YWHAGP61981 247 aaKnown RBP eCLIP19.64■□□□□ 0.73
PNKP-213ENST00000599543 YWHAEP62258 255 aaKnown RBP19.64■□□□□ 0.73
PNKP-213ENST00000599543 PAK1Q13153 545 aa19.64■□□□□ 0.73
PNKP-213ENST00000599543 GOLGA7BQ2TAP0 167 aa19.64■□□□□ 0.73
PNKP-213ENST00000599543 DPCR1Q3MIW9 517 aa19.64■□□□□ 0.73
PNKP-213ENST00000599543 RAB41Q5JT25 222 aa19.64■□□□□ 0.73
PNKP-213ENST00000599543 SPDYCQ5MJ68 293 aa19.64■□□□□ 0.73
PNKP-213ENST00000599543 LYSMD4Q5XG99 296 aa19.64■□□□□ 0.73
PNKP-213ENST00000599543 TTI2Q6NXR4 508 aa19.64■□□□□ 0.73
PNKP-213ENST00000599543 ZC3H3Q8IXZ2 948 aaKnown RBP19.64■□□□□ 0.73
PNKP-213ENST00000599543 TRIML1Q8N9V2 468 aa19.64■□□□□ 0.73
PNKP-213ENST00000599543 DCLK3Q9C098 648 aa19.64■□□□□ 0.73
PNKP-213ENST00000599543 CALCOCO1Q9P1Z2 691 aa19.64■□□□□ 0.73
PNKP-213ENST00000599543 HESX1Q9UBX0 185 aa19.64■□□□□ 0.73
PNKP-213ENST00000599543 COQ4Q9Y3A0 265 aa19.64■□□□□ 0.73
PNKP-213ENST00000599543 ASCC3Q8N3C0 2202 aaKnown RBP19.63■□□□□ 0.73
PNKP-213ENST00000599543 A0A1W2PQF6 199 aa19.63■□□□□ 0.73
PNKP-213ENST00000599543 AP5Z1O43299 807 aa19.63■□□□□ 0.73
PNKP-213ENST00000599543 KCNK5O95279 499 aa19.63■□□□□ 0.73
PNKP-213ENST00000599543 CORO1AP31146 461 aaKnown RBP19.63■□□□□ 0.73
PNKP-213ENST00000599543 DPP6P42658 865 aa19.63■□□□□ 0.73
PNKP-213ENST00000599543 BCAT1P54687 386 aa19.63■□□□□ 0.73
PNKP-213ENST00000599543 RPL6Q02878 288 aaKnown RBP19.63■□□□□ 0.73
PNKP-213ENST00000599543 SGO2Q562F6 1265 aa19.63■□□□□ 0.73
PNKP-213ENST00000599543 TRIM61Q5EBN2 209 aa19.63■□□□□ 0.73
PNKP-213ENST00000599543 PSAPL1Q6NUJ1 521 aa19.63■□□□□ 0.73
PNKP-213ENST00000599543 SYT12Q8IV01 421 aa19.63■□□□□ 0.73
PNKP-213ENST00000599543 MED15Q96RN5 788 aa19.63■□□□□ 0.73
PNKP-213ENST00000599543 ACOX2Q99424 681 aa19.63■□□□□ 0.73
PNKP-213ENST00000599543 MARCH2Q9P0N8 246 aa19.63■□□□□ 0.73
PNKP-213ENST00000599543 TMEM63CQ9P1W3 806 aa19.63■□□□□ 0.73
PNKP-213ENST00000599543 EVLQ9UI08 416 aaPredicted RBP19.63■□□□□ 0.73
PNKP-213ENST00000599543 TSPAN16Q9UKR8 245 aa19.63■□□□□ 0.73
PNKP-213ENST00000599543 XPO1O14980 1071 aaKnown RBP19.62■□□□□ 0.73
PNKP-213ENST00000599543 MBD3O95983 291 aa19.62■□□□□ 0.73
PNKP-213ENST00000599543 ZBED1O96006 694 aa19.62■□□□□ 0.73
PNKP-213ENST00000599543 KLKB1P03952 638 aa19.62■□□□□ 0.73
PNKP-213ENST00000599543 CISD3P0C7P0 127 aa19.62■□□□□ 0.73
PNKP-213ENST00000599543 CD19P15391 556 aa19.62■□□□□ 0.73
PNKP-213ENST00000599543 TBXAS1P24557 533 aaPredicted RBP19.62■□□□□ 0.73
PNKP-213ENST00000599543 IRX4P78413 519 aa19.62■□□□□ 0.73
PNKP-213ENST00000599543 BST2Q10589 180 aaKnown RBP19.62■□□□□ 0.73
PNKP-213ENST00000599543 LMAN2Q12907 356 aa19.62■□□□□ 0.73
PNKP-213ENST00000599543 N4BP2L1Q5TBK1 243 aaPredicted RBP19.62■□□□□ 0.73
PNKP-213ENST00000599543 SLC36A4Q6YBV0 504 aa19.62■□□□□ 0.73
PNKP-213ENST00000599543 IPO4Q8TEX9 1081 aaKnown RBP19.62■□□□□ 0.73
PNKP-213ENST00000599543 SLC35C1Q96A29 364 aa19.62■□□□□ 0.73
PNKP-213ENST00000599543 ERLEC1Q96DZ1 483 aa19.62■□□□□ 0.73
PNKP-213ENST00000599543 GABRG3Q99928 467 aa19.62■□□□□ 0.73
PNKP-213ENST00000599543 NUSAP1Q9BXS6 441 aaKnown RBP19.62■□□□□ 0.73
PNKP-213ENST00000599543 LRRC4Q9HBW1 653 aa19.62■□□□□ 0.73
PNKP-213ENST00000599543 CACNA2D2Q9NY47 1150 aa19.62■□□□□ 0.73
PNKP-213ENST00000599543 ANGPTL2Q9UKU9 493 aa19.62■□□□□ 0.73
PNKP-213ENST00000599543 KMT2BQ9UMN6 2715 aaPredicted RBP19.62■□□□□ 0.73
PNKP-213ENST00000599543 ADAMTS9Q9P2N4 1935 aa19.61■□□□□ 0.73
PNKP-213ENST00000599543 ATXN2Q99700 1313 aaKnown RBP19.61■□□□□ 0.73
PNKP-213ENST00000599543 SLC12A8A0AV02 714 aa19.61■□□□□ 0.73
PNKP-213ENST00000599543 ZNF217O75362 1048 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms