RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 RTP4Q96DX8 246 aa15.02□□□□□ -0.01
VRK3-217ENST00000599538 TRPV6Q9H1D0 765 aa15.02□□□□□ -0.01
VRK3-217ENST00000599538 KCNK9Q9NPC2 374 aa15.02□□□□□ -0.01
VRK3-217ENST00000599538 DTLQ9NZJ0 730 aa15.02□□□□□ -0.01
VRK3-217ENST00000599538 DDX20Q9UHI6 824 aaKnown RBP15.02□□□□□ -0.01
VRK3-217ENST00000599538 RABGEF1Q9UJ41 708 aa15.02□□□□□ -0.01
VRK3-217ENST00000599538 CHMP2BQ9UQN3 213 aa15.02□□□□□ -0.01
VRK3-217ENST00000599538 RPL9P32969 192 aaKnown RBP15.01□□□□□ -0.01
VRK3-217ENST00000599538 NOS2P35228 1153 aa15.01□□□□□ -0.01
VRK3-217ENST00000599538 DAOAP59103 153 aa15.01□□□□□ -0.01
VRK3-217ENST00000599538 PTK7Q13308 1070 aa15.01□□□□□ -0.01
VRK3-217ENST00000599538 MBTPS1Q14703 1052 aa15.01□□□□□ -0.01
VRK3-217ENST00000599538 PKN2Q16513 984 aaKnown RBP15.01□□□□□ -0.01
VRK3-217ENST00000599538 MAP3K21Q5TCX8 1036 aa15.01□□□□□ -0.01
VRK3-217ENST00000599538 KCNT2Q6UVM3 1135 aa15.01□□□□□ -0.01
VRK3-217ENST00000599538 C3orf62Q6ZUJ4 267 aa15.01□□□□□ -0.01
VRK3-217ENST00000599538 BHLHA9Q7RTU4 235 aa15.01□□□□□ -0.01
VRK3-217ENST00000599538 CHMP6Q96FZ7 201 aa15.01□□□□□ -0.01
VRK3-217ENST00000599538 SLC2A13Q96QE2 648 aa15.01□□□□□ -0.01
VRK3-217ENST00000599538 NCAPGQ9BPX3 1015 aa15.01□□□□□ -0.01
VRK3-217ENST00000599538 DNAI2Q9GZS0 605 aa15.01□□□□□ -0.01
VRK3-217ENST00000599538 GPBP1L1Q9HC44 474 aaPredicted RBP15.01□□□□□ -0.01
VRK3-217ENST00000599538 CDH9Q9ULB4 789 aa15.01□□□□□ -0.01
VRK3-217ENST00000599538 FAM169AQ9Y6X4 670 aa15.01□□□□□ -0.01
VRK3-217ENST00000599538 MYO18AQ92614 2054 aaKnown RBP15.01□□□□□ -0.01
VRK3-217ENST00000599538 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.01□□□□□ -0.01
VRK3-217ENST00000599538 ZNF487B1APH4 448 aa15.01□□□□□ -0.01
VRK3-217ENST00000599538 RASA4BC9J798 803 aa15.01□□□□□ -0.01
VRK3-217ENST00000599538 RASA4O43374 803 aa15.01□□□□□ -0.01
VRK3-217ENST00000599538 TRPA1O75762 1119 aa15.01□□□□□ -0.01
VRK3-217ENST00000599538 METTL18O95568 372 aa15.01□□□□□ -0.01
VRK3-217ENST00000599538 ELK3P41970 407 aa15.01□□□□□ -0.01
VRK3-217ENST00000599538 NOGQ13253 232 aa15.01□□□□□ -0.01
VRK3-217ENST00000599538 LRRTM3Q86VH5 581 aa15.01□□□□□ -0.01
VRK3-217ENST00000599538 TP53INP2Q8IXH6 220 aa15.01□□□□□ -0.01
VRK3-217ENST00000599538 LRRC34Q8IZ02 419 aa15.01□□□□□ -0.01
VRK3-217ENST00000599538 PCSK9Q8NBP7 692 aaKnown RBP15.01□□□□□ -0.01
VRK3-217ENST00000599538 OR10T2Q8NGX3 314 aa15.01□□□□□ -0.01
VRK3-217ENST00000599538 MYLPFQ96A32 169 aa15.01□□□□□ -0.01
VRK3-217ENST00000599538 ETNK1Q9HBU6 452 aa15.01□□□□□ -0.01
VRK3-217ENST00000599538 POPDC2Q9HBU9 364 aa15.01□□□□□ -0.01
VRK3-217ENST00000599538 SRRDQ9UH36 339 aa15.01□□□□□ -0.01
VRK3-217ENST00000599538 FAM72CH0Y354 149 aa15□□□□□ -0.01
VRK3-217ENST00000599538 TRIM66O15016 1216 aa15□□□□□ -0.01
VRK3-217ENST00000599538 VAV1P15498 845 aa15□□□□□ -0.01
VRK3-217ENST00000599538 RNASELQ05823 741 aaKnown RBP15□□□□□ -0.01
VRK3-217ENST00000599538 RAB41Q5JT25 222 aa15□□□□□ -0.01
VRK3-217ENST00000599538 FAM72AQ5TYM5 149 aa15□□□□□ -0.01
VRK3-217ENST00000599538 FAM72DQ6L9T8 149 aa15□□□□□ -0.01
VRK3-217ENST00000599538 TRAF7Q6Q0C0 670 aa15□□□□□ -0.01
VRK3-217ENST00000599538 TADA2BQ86TJ2 420 aa15□□□□□ -0.01
VRK3-217ENST00000599538 ZNF598Q86UK7 904 aaKnown RBP15□□□□□ -0.01
VRK3-217ENST00000599538 FAM72BQ86X60 149 aa15□□□□□ -0.01
VRK3-217ENST00000599538 ECHDC2Q86YB7 292 aa15□□□□□ -0.01
VRK3-217ENST00000599538 PDIK1LQ8N165 341 aa15□□□□□ -0.01
VRK3-217ENST00000599538 SMC1BQ8NDV3 1235 aa15□□□□□ -0.01
VRK3-217ENST00000599538 SLC7A14Q8TBB6 771 aa15□□□□□ -0.01
VRK3-217ENST00000599538 FBF1Q8TES7 1133 aa15□□□□□ -0.01
VRK3-217ENST00000599538 EDEM1Q92611 657 aa15□□□□□ -0.01
VRK3-217ENST00000599538 CAPNS2Q96L46 248 aa15□□□□□ -0.01
VRK3-217ENST00000599538 LGMNQ99538 433 aa15□□□□□ -0.01
VRK3-217ENST00000599538 ARHGEF4Q9NR80 690 aa15□□□□□ -0.01
VRK3-217ENST00000599538 PAK5Q9P286 719 aa15□□□□□ -0.01
VRK3-217ENST00000599538 TTC3P53804 2025 aa15□□□□□ -0.01
VRK3-217ENST00000599538 A0A1W2PPM1 405 aa14.99□□□□□ -0.01
VRK3-217ENST00000599538 C5orf60A6NFR6 353 aa14.99□□□□□ -0.01
VRK3-217ENST00000599538 F5H423 210 aaPredicted RBP14.99□□□□□ -0.01
VRK3-217ENST00000599538 CREB3O43889 395 aa14.99□□□□□ -0.01
VRK3-217ENST00000599538 MFSD11O43934 449 aa14.99□□□□□ -0.01
VRK3-217ENST00000599538 SPAG7O75391 227 aa14.99□□□□□ -0.01
VRK3-217ENST00000599538 CKBP12277 381 aa14.99□□□□□ -0.01
VRK3-217ENST00000599538 BDNFP23560 247 aa14.99□□□□□ -0.01
VRK3-217ENST00000599538 ATP5DP30049 168 aa14.99□□□□□ -0.01
VRK3-217ENST00000599538 RAB27AP51159 221 aa14.99□□□□□ -0.01
VRK3-217ENST00000599538 DEUP1Q05D60 604 aa14.99□□□□□ -0.01
VRK3-217ENST00000599538 SLC45A4Q5BKX6 768 aa14.99□□□□□ -0.01
VRK3-217ENST00000599538 TRABD2AQ86V40 505 aa14.99□□□□□ -0.01
VRK3-217ENST00000599538 GDAP1Q8TB36 358 aa14.99□□□□□ -0.01
VRK3-217ENST00000599538 WDR6Q9NNW5 1121 aaKnown RBP14.99□□□□□ -0.01
VRK3-217ENST00000599538 MYO1CO00159 1063 aa14.99□□□□□ -0.01
VRK3-217ENST00000599538 NDC80O14777 642 aa14.99□□□□□ -0.01
VRK3-217ENST00000599538 APRTP07741 180 aa14.99□□□□□ -0.01
VRK3-217ENST00000599538 NCAM1P13591 858 aa14.99□□□□□ -0.01
VRK3-217ENST00000599538 RDXP35241 583 aaKnown RBP14.99□□□□□ -0.01
VRK3-217ENST00000599538 TUSC3Q13454 348 aa14.99□□□□□ -0.01
VRK3-217ENST00000599538 EFHC2Q5JST6 749 aa14.99□□□□□ -0.01
VRK3-217ENST00000599538 FAM26DQ5JW98 314 aa14.99□□□□□ -0.01
VRK3-217ENST00000599538 CPLX4Q7Z7G2 160 aa14.99□□□□□ -0.01
VRK3-217ENST00000599538 RNF180Q86T96 592 aa14.99□□□□□ -0.01
VRK3-217ENST00000599538 CAND1Q86VP6 1230 aaKnown RBP14.99□□□□□ -0.01
VRK3-217ENST00000599538 ZNF280BQ86YH2 543 aa14.99□□□□□ -0.01
VRK3-217ENST00000599538 TDRPQ86YL5 185 aa14.99□□□□□ -0.01
VRK3-217ENST00000599538 ATP11CQ8NB49 1132 aa14.99□□□□□ -0.01
VRK3-217ENST00000599538 RNF139Q8WU17 664 aa14.99□□□□□ -0.01
VRK3-217ENST00000599538 LINC01599Q8WXQ3 324 aa14.99□□□□□ -0.01
VRK3-217ENST00000599538 SEC16BQ96JE7 1060 aa14.99□□□□□ -0.01
VRK3-217ENST00000599538 PKMYT1Q99640 499 aa14.99□□□□□ -0.01
VRK3-217ENST00000599538 TRIM56Q9BRZ2 755 aaKnown RBP14.99□□□□□ -0.01
VRK3-217ENST00000599538 TEX264Q9Y6I9 313 aa14.99□□□□□ -0.01
VRK3-217ENST00000599538 CFAP69A5D8W1 941 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms