RNA–Protein interactions for RNA: ENST00000599097.1

HOMER3-210, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 770 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-210ENST00000599097 USP3Q9Y6I4 520 aa18.34■□□□□ 0.53
HOMER3-210ENST00000599097 LAMA1P25391 3075 aa18.33■□□□□ 0.53
HOMER3-210ENST00000599097 H0Y626 953 aa18.33■□□□□ 0.52
HOMER3-210ENST00000599097 OPHN1O60890 802 aa18.33■□□□□ 0.52
HOMER3-210ENST00000599097 KRT37O76014 449 aa18.33■□□□□ 0.52
HOMER3-210ENST00000599097 STC2O76061 302 aa18.33■□□□□ 0.52
HOMER3-210ENST00000599097 TRIM16O95361 564 aa18.33■□□□□ 0.52
HOMER3-210ENST00000599097 PROS1P07225 676 aa18.33■□□□□ 0.52
HOMER3-210ENST00000599097 ITPKAP23677 461 aa18.33■□□□□ 0.52
HOMER3-210ENST00000599097 MAPK8P45983 427 aa18.33■□□□□ 0.52
HOMER3-210ENST00000599097 PPP3CAQ08209 521 aa18.33■□□□□ 0.52
HOMER3-210ENST00000599097 FOXC1Q12948 553 aa18.33■□□□□ 0.52
HOMER3-210ENST00000599097 SPRYD3Q8NCJ5 442 aa18.33■□□□□ 0.52
HOMER3-210ENST00000599097 ELMO3Q96BJ8 720 aa18.33■□□□□ 0.52
HOMER3-210ENST00000599097 TMEM176AQ96HP8 235 aa18.33■□□□□ 0.52
HOMER3-210ENST00000599097 TWNKQ96RR1 684 aa18.33■□□□□ 0.52
HOMER3-210ENST00000599097 SLC2A11Q9BYW1 496 aa18.33■□□□□ 0.52
HOMER3-210ENST00000599097 APOBEC3GQ9HC16 384 aaKnown RBP18.33■□□□□ 0.52
HOMER3-210ENST00000599097 OSER1Q9NX31 292 aa18.33■□□□□ 0.52
HOMER3-210ENST00000599097 HESX1Q9UBX0 185 aa18.33■□□□□ 0.52
HOMER3-210ENST00000599097 RASAL2Q9UJF2 1139 aa18.33■□□□□ 0.52
HOMER3-210ENST00000599097 NFE2L3Q9Y4A8 694 aa18.33■□□□□ 0.52
HOMER3-210ENST00000599097 MYO18AQ92614 2054 aaKnown RBP18.32■□□□□ 0.52
HOMER3-210ENST00000599097 IGHV1OR15-9A0A0B4J2B8 117 aa18.32■□□□□ 0.52
HOMER3-210ENST00000599097 A0A1W2PQF6 199 aa18.32■□□□□ 0.52
HOMER3-210ENST00000599097 SYNCRIPO60506 623 aaKnown RBP18.32■□□□□ 0.52
HOMER3-210ENST00000599097 PENKP01210 267 aaPredicted RBP18.32■□□□□ 0.52
HOMER3-210ENST00000599097 NDUFV2P19404 249 aa18.32■□□□□ 0.52
HOMER3-210ENST00000599097 WASP42768 502 aa18.32■□□□□ 0.52
HOMER3-210ENST00000599097 ARID5AQ03989 594 aa18.32■□□□□ 0.52
HOMER3-210ENST00000599097 PPP1R26Q5T8A7 1209 aaPredicted RBP18.32■□□□□ 0.52
HOMER3-210ENST00000599097 ARHGAP17Q68EM7 881 aa18.32■□□□□ 0.52
HOMER3-210ENST00000599097 UNQ6494/PRO21346Q6UXR6 183 aa18.32■□□□□ 0.52
HOMER3-210ENST00000599097 ANKS1BQ7Z6G8 1248 aa18.32■□□□□ 0.52
HOMER3-210ENST00000599097 METTL3Q86U44 580 aaKnown RBP18.32■□□□□ 0.52
HOMER3-210ENST00000599097 PLD4Q96BZ4 506 aa18.32■□□□□ 0.52
HOMER3-210ENST00000599097 ZDHHC5Q9C0B5 715 aa18.32■□□□□ 0.52
HOMER3-210ENST00000599097 NMUR1Q9HB89 426 aa18.32■□□□□ 0.52
HOMER3-210ENST00000599097 ZDHHC4Q9NPG8 344 aa18.32■□□□□ 0.52
HOMER3-210ENST00000599097 CISHQ9NSE2 258 aa18.32■□□□□ 0.52
HOMER3-210ENST00000599097 RAB20Q9NX57 234 aa18.32■□□□□ 0.52
HOMER3-210ENST00000599097 MARCH2Q9P0N8 246 aa18.32■□□□□ 0.52
HOMER3-210ENST00000599097 HOOK1Q9UJC3 728 aaKnown RBP18.32■□□□□ 0.52
HOMER3-210ENST00000599097 CYP8B1Q9UNU6 501 aa18.32■□□□□ 0.52
HOMER3-210ENST00000599097 MAPK8IP1Q9UQF2 711 aa18.32■□□□□ 0.52
HOMER3-210ENST00000599097 ATXN2Q99700 1313 aaKnown RBP18.31■□□□□ 0.52
HOMER3-210ENST00000599097 TNRC6BQ9UPQ9 1833 aaKnown RBP18.31■□□□□ 0.52
HOMER3-210ENST00000599097 SLC16A3O15427 465 aaKnown RBP18.31■□□□□ 0.52
HOMER3-210ENST00000599097 TIMM44O43615 452 aa18.31■□□□□ 0.52
HOMER3-210ENST00000599097 CORO1AP31146 461 aaKnown RBP18.31■□□□□ 0.52
HOMER3-210ENST00000599097 BCAT1P54687 386 aa18.31■□□□□ 0.52
HOMER3-210ENST00000599097 MCCD1P59942 119 aaPredicted RBP18.31■□□□□ 0.52
HOMER3-210ENST00000599097 EFEMP1Q12805 493 aa18.31■□□□□ 0.52
HOMER3-210ENST00000599097 SLC14A1Q13336 389 aa18.31■□□□□ 0.52
HOMER3-210ENST00000599097 ZCWPW2Q504Y3 356 aa18.31■□□□□ 0.52
HOMER3-210ENST00000599097 ZNF394Q53GI3 561 aa18.31■□□□□ 0.52
HOMER3-210ENST00000599097 KIAA1324Q6UXG2 1013 aaKnown RBP18.31■□□□□ 0.52
HOMER3-210ENST00000599097 RGL4Q8IZJ4 473 aa18.31■□□□□ 0.52
HOMER3-210ENST00000599097 CPXM2Q8N436 756 aa18.31■□□□□ 0.52
HOMER3-210ENST00000599097 ANKRD52Q8NB46 1076 aa18.31■□□□□ 0.52
HOMER3-210ENST00000599097 WBP2Q969T9 261 aa18.31■□□□□ 0.52
HOMER3-210ENST00000599097 HSPA12BQ96MM6 686 aa18.31■□□□□ 0.52
HOMER3-210ENST00000599097 GTPBP2Q9BX10 602 aaKnown RBP18.31■□□□□ 0.52
HOMER3-210ENST00000599097 ADAM33Q9BZ11 813 aa18.31■□□□□ 0.52
HOMER3-210ENST00000599097 TMEM74BQ9NUR3 256 aa18.31■□□□□ 0.52
HOMER3-210ENST00000599097 FBXO10Q9UK96 956 aa18.31■□□□□ 0.52
HOMER3-210ENST00000599097 GOLGA6L4A6NEF3 574 aa18.3■□□□□ 0.52
HOMER3-210ENST00000599097 ANTXRLA6NF34 631 aa18.3■□□□□ 0.52
HOMER3-210ENST00000599097 PRRT4C9JH25 899 aa18.3■□□□□ 0.52
HOMER3-210ENST00000599097 ARHGAP33O14559 1287 aa18.3■□□□□ 0.52
HOMER3-210ENST00000599097 ZNF202O95125 648 aa18.3■□□□□ 0.52
HOMER3-210ENST00000599097 ZBED1O96006 694 aa18.3■□□□□ 0.52
HOMER3-210ENST00000599097 TBXAS1P24557 533 aaPredicted RBP18.3■□□□□ 0.52
HOMER3-210ENST00000599097 OXTRP30559 389 aa18.3■□□□□ 0.52
HOMER3-210ENST00000599097 HARS2P49590 506 aaKnown RBP18.3■□□□□ 0.52
HOMER3-210ENST00000599097 PGFP49763 221 aa18.3■□□□□ 0.52
HOMER3-210ENST00000599097 YWHAGP61981 247 aaKnown RBP eCLIP18.3■□□□□ 0.52
HOMER3-210ENST00000599097 TCERG1LQ5VWI1 586 aa18.3■□□□□ 0.52
HOMER3-210ENST00000599097 ZNF557Q8N988 423 aaPredicted RBP18.3■□□□□ 0.52
HOMER3-210ENST00000599097 TRIML1Q8N9V2 468 aa18.3■□□□□ 0.52
HOMER3-210ENST00000599097 DEFB124Q8NES8 71 aa18.3■□□□□ 0.52
HOMER3-210ENST00000599097 RNF139Q8WU17 664 aa18.3■□□□□ 0.52
HOMER3-210ENST00000599097 MRGPRX1Q96LB2 322 aa18.3■□□□□ 0.52
HOMER3-210ENST00000599097 IPO9Q96P70 1041 aaKnown RBP18.3■□□□□ 0.52
HOMER3-210ENST00000599097 PRDM16Q9HAZ2 1276 aa18.3■□□□□ 0.52
HOMER3-210ENST00000599097 LRRC4Q9HBW1 653 aa18.3■□□□□ 0.52
HOMER3-210ENST00000599097 CAPN10Q9HC96 672 aa18.3■□□□□ 0.52
HOMER3-210ENST00000599097 CACNA2D2Q9NY47 1150 aa18.3■□□□□ 0.52
HOMER3-210ENST00000599097 MEI4A8MW99 385 aa18.29■□□□□ 0.52
HOMER3-210ENST00000599097 GIPC1O14908 333 aa18.29■□□□□ 0.52
HOMER3-210ENST00000599097 MDM4O15151 490 aa18.29■□□□□ 0.52
HOMER3-210ENST00000599097 SMC2O95347 1197 aa18.29■□□□□ 0.52
HOMER3-210ENST00000599097 CISD3P0C7P0 127 aa18.29■□□□□ 0.52
HOMER3-210ENST00000599097 PRR29P0C7W0 189 aa18.29■□□□□ 0.52
HOMER3-210ENST00000599097 ACADMP11310 421 aa18.29■□□□□ 0.52
HOMER3-210ENST00000599097 CD6P30203 668 aa18.29■□□□□ 0.52
HOMER3-210ENST00000599097 MFAP3P55082 362 aa18.29■□□□□ 0.52
HOMER3-210ENST00000599097 BST2Q10589 180 aaKnown RBP18.29■□□□□ 0.52
HOMER3-210ENST00000599097 SEMA3BQ13214 749 aa18.29■□□□□ 0.52
HOMER3-210ENST00000599097 SGO2Q562F6 1265 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms