RNA–Protein interactions for RNA: ENST00000598558.5

SHKBP1-217, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-217ENST00000598558 CEP83Q9Y592 693 aa14.84□□□□□ -0.03
SHKBP1-217ENST00000598558 GOLGA8SH3BPF8 625 aa14.83□□□□□ -0.04
SHKBP1-217ENST00000598558 CBFA2T2O43439 604 aa14.83□□□□□ -0.04
SHKBP1-217ENST00000598558 IGLV3-25P01717 112 aa14.83□□□□□ -0.04
SHKBP1-217ENST00000598558 IGLV3-27P01718 113 aa14.83□□□□□ -0.04
SHKBP1-217ENST00000598558 DCNP07585 359 aaKnown RBP14.83□□□□□ -0.04
SHKBP1-217ENST00000598558 CORO1AP31146 461 aaKnown RBP14.83□□□□□ -0.04
SHKBP1-217ENST00000598558 SLC6A11P48066 632 aa14.83□□□□□ -0.04
SHKBP1-217ENST00000598558 MLLT6P55198 1093 aaPredicted RBP14.83□□□□□ -0.04
SHKBP1-217ENST00000598558 ZBED6P86452 979 aa14.83□□□□□ -0.04
SHKBP1-217ENST00000598558 CENPCQ03188 943 aa14.83□□□□□ -0.04
SHKBP1-217ENST00000598558 EFHC1Q5JVL4 640 aa14.83□□□□□ -0.04
SHKBP1-217ENST00000598558 LY6G5CQ5SRR4 150 aa14.83□□□□□ -0.04
SHKBP1-217ENST00000598558 SPECC1LQ69YQ0 1117 aa14.83□□□□□ -0.04
SHKBP1-217ENST00000598558 TRIM72Q6ZMU5 477 aa14.83□□□□□ -0.04
SHKBP1-217ENST00000598558 SLC26A9Q7LBE3 791 aa14.83□□□□□ -0.04
SHKBP1-217ENST00000598558 TADA2BQ86TJ2 420 aa14.83□□□□□ -0.04
SHKBP1-217ENST00000598558 C12orf40Q86WS4 652 aa14.83□□□□□ -0.04
SHKBP1-217ENST00000598558 KIAA1958Q8N8K9 716 aa14.83□□□□□ -0.04
SHKBP1-217ENST00000598558 ZNF397Q8NF99 534 aaPredicted RBP14.83□□□□□ -0.04
SHKBP1-217ENST00000598558 FAM3CQ92520 227 aa14.83□□□□□ -0.04
SHKBP1-217ENST00000598558 SLC39A13Q96H72 371 aa14.83□□□□□ -0.04
SHKBP1-217ENST00000598558 C11orf70Q9BRQ4 267 aa14.83□□□□□ -0.04
SHKBP1-217ENST00000598558 C8orf33Q9H7E9 229 aaPredicted RBP14.83□□□□□ -0.04
SHKBP1-217ENST00000598558 ASNSD1Q9NWL6 643 aa14.83□□□□□ -0.04
SHKBP1-217ENST00000598558 DLGAP2Q9P1A6 1054 aa14.83□□□□□ -0.04
SHKBP1-217ENST00000598558 TMEM59LQ9UK28 342 aa14.83□□□□□ -0.04
SHKBP1-217ENST00000598558 STRIP2Q9ULQ0 834 aa14.83□□□□□ -0.04
SHKBP1-217ENST00000598558 MYH10P35580 1976 aa14.83□□□□□ -0.04
SHKBP1-217ENST00000598558 KIF26AQ9ULI4 1882 aaPredicted RBP14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 GOLGA6L7A0A1B0GV03 622 aa14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 TCRBV5S1A1TA0A578 114 aa14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 FAM170BA6NMN3 283 aa14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 STK25O00506 426 aa14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 SART1O43290 800 aaKnown RBP14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 GLI1P08151 1106 aa14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 AOC1P19801 751 aa14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 TNFAIP3P21580 790 aa14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 AVPR2P30518 371 aa14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 FLT3P36888 993 aa14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 OPRD1P41143 372 aa14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 GALK1P51570 392 aa14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 RNASE9P60153 205 aaKnown RBP14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 KLHL30Q0D2K2 578 aa14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 TBX2Q13207 712 aaPredicted RBP14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 UBXN2BQ14CS0 331 aa14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 PON2Q15165 354 aa14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 RAB6CQ53S08 254 aa14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 DCAF6Q58WW2 860 aa14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 ASTLQ6HA08 431 aaPredicted RBP14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 ACAD10Q6JQN1 1059 aa14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 WDR59Q6PJI9 974 aa14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 ZNF852Q6ZMS4 543 aa14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 MON1BQ7L1V2 547 aa14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 RALGPS2Q86X27 583 aaPredicted RBP14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 PHF13Q86YI8 300 aaPredicted RBP14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 DENND1CQ8IV53 801 aa14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 SFTPA1Q8IWL2 248 aa14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 CCDC105Q8IYK2 499 aa14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 IPO4Q8TEX9 1081 aaKnown RBP14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 SYN2Q92777 582 aaPredicted RBP14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 EZH1Q92800 747 aaPredicted RBP14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 ATP2A3Q93084 1043 aa14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 MYEOVQ96EZ4 313 aa14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 SHDQ96IW2 340 aa14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 FCRL2Q96LA5 508 aaPredicted RBP14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 RAB6CQ9H0N0 254 aa14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 MFSD1Q9H3U5 465 aa14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 SYNCQ9H7C4 482 aa14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 RBM12Q9NTZ6 932 aaKnown RBP14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 SEPT11Q9NVA2 429 aaKnown RBP14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 TBC1D14Q9P2M4 693 aa14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 XPO7Q9UIA9 1087 aaKnown RBP14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 NDRG2Q9UN36 371 aaKnown RBP14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 LUC7L2Q9Y383 392 aaKnown RBP14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 HBS1LQ9Y450 684 aaKnown RBP14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 MYO16Q9Y6X6 1858 aa14.82□□□□□ -0.04
SHKBP1-217ENST00000598558 TMCO5BA8MYB1 307 aa14.81□□□□□ -0.04
SHKBP1-217ENST00000598558 GFRA2O00451 464 aa14.81□□□□□ -0.04
SHKBP1-217ENST00000598558 TRDMT1O14717 391 aaKnown RBP14.81□□□□□ -0.04
SHKBP1-217ENST00000598558 SLC9A3R1O14745 358 aaPredicted RBP14.81□□□□□ -0.04
SHKBP1-217ENST00000598558 CAPN9O14815 690 aa14.81□□□□□ -0.04
SHKBP1-217ENST00000598558 TRIM24O15164 1050 aa14.81□□□□□ -0.04
SHKBP1-217ENST00000598558 HSF2BPO75031 334 aa14.81□□□□□ -0.04
SHKBP1-217ENST00000598558 DAB1O75553 588 aa14.81□□□□□ -0.04
SHKBP1-217ENST00000598558 NFATC1O95644 943 aa14.81□□□□□ -0.04
SHKBP1-217ENST00000598558 TRUB2O95900 331 aaKnown RBP14.81□□□□□ -0.04
SHKBP1-217ENST00000598558 CHRNB1P11230 501 aa14.81□□□□□ -0.04
SHKBP1-217ENST00000598558 CLCN5P51795 746 aa14.81□□□□□ -0.04
SHKBP1-217ENST00000598558 TBX4P57082 545 aa14.81□□□□□ -0.04
SHKBP1-217ENST00000598558 FAM102AQ5T9C2 384 aaPredicted RBP14.81□□□□□ -0.04
SHKBP1-217ENST00000598558 NADSYN1Q6IA69 706 aa14.81□□□□□ -0.04
SHKBP1-217ENST00000598558 FSTL4Q6MZW2 842 aa14.81□□□□□ -0.04
SHKBP1-217ENST00000598558 TPGS1Q6ZTW0 290 aa14.81□□□□□ -0.04
SHKBP1-217ENST00000598558 CPA6Q8N4T0 437 aa14.81□□□□□ -0.04
SHKBP1-217ENST00000598558 EMC1Q8N766 993 aa14.81□□□□□ -0.04
SHKBP1-217ENST00000598558 PJA1Q8NG27 643 aa14.81□□□□□ -0.04
SHKBP1-217ENST00000598558 JOSD2Q8TAC2 188 aa14.81□□□□□ -0.04
SHKBP1-217ENST00000598558 GOLGA1Q92805 767 aa14.81□□□□□ -0.04
SHKBP1-217ENST00000598558 PLD4Q96BZ4 506 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms