RNA–Protein interactions for RNA: ENST00000598178.1

LTBP4-221, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 446 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-221ENST00000598178 SPHK2Q9NRA0 654 aa13.14□□□□□ -0.31
LTBP4-221ENST00000598178 CLIC5Q9NZA1 410 aa13.14□□□□□ -0.31
LTBP4-221ENST00000598178 HESX1Q9UBX0 185 aa13.14□□□□□ -0.31
LTBP4-221ENST00000598178 EVLQ9UI08 416 aaPredicted RBP13.14□□□□□ -0.31
LTBP4-221ENST00000598178 KALRNO60229 2985 aa13.14□□□□□ -0.31
LTBP4-221ENST00000598178 TNRC6BQ9UPQ9 1833 aaKnown RBP13.13□□□□□ -0.31
LTBP4-221ENST00000598178 A0A1W2PQH9 124 aa13.13□□□□□ -0.31
LTBP4-221ENST00000598178 TBC1D3BA6NDS4 549 aa13.13□□□□□ -0.31
LTBP4-221ENST00000598178 UPK3BL1B0FP48 263 aa13.13□□□□□ -0.31
LTBP4-221ENST00000598178 HHLA1C9JL84 531 aa13.13□□□□□ -0.31
LTBP4-221ENST00000598178 UPK3BL2E5RIL1 263 aa13.13□□□□□ -0.31
LTBP4-221ENST00000598178 ZBTB24O43167 697 aaPredicted RBP13.13□□□□□ -0.31
LTBP4-221ENST00000598178 CAPNS1P04632 268 aa13.13□□□□□ -0.31
LTBP4-221ENST00000598178 GBP1P32455 592 aa13.13□□□□□ -0.31
LTBP4-221ENST00000598178 PLA2G4AP47712 749 aa13.13□□□□□ -0.31
LTBP4-221ENST00000598178 KIF11P52732 1056 aa13.13□□□□□ -0.31
LTBP4-221ENST00000598178 CBWD6Q4V339 395 aa13.13□□□□□ -0.31
LTBP4-221ENST00000598178 CBWD3Q5JTY5 395 aa13.13□□□□□ -0.31
LTBP4-221ENST00000598178 CBWD5Q5RIA9 395 aa13.13□□□□□ -0.31
LTBP4-221ENST00000598178 ARHGAP17Q68EM7 881 aa13.13□□□□□ -0.31
LTBP4-221ENST00000598178 ANO7Q6IWH7 933 aa13.13□□□□□ -0.31
LTBP4-221ENST00000598178 HTR3DQ70Z44 454 aa13.13□□□□□ -0.31
LTBP4-221ENST00000598178 TTC30AQ86WT1 665 aa13.13□□□□□ -0.31
LTBP4-221ENST00000598178 WHAMMQ8TF30 809 aa13.13□□□□□ -0.31
LTBP4-221ENST00000598178 EZH1Q92800 747 aaPredicted RBP13.13□□□□□ -0.31
LTBP4-221ENST00000598178 SEMA4DQ92854 862 aa13.13□□□□□ -0.31
LTBP4-221ENST00000598178 COL26A1Q96A83 441 aa13.13□□□□□ -0.31
LTBP4-221ENST00000598178 CNOT6LQ96LI5 555 aaKnown RBP13.13□□□□□ -0.31
LTBP4-221ENST00000598178 FUCA2Q9BTY2 467 aa13.13□□□□□ -0.31
LTBP4-221ENST00000598178 UBXN6Q9BZV1 441 aa13.13□□□□□ -0.31
LTBP4-221ENST00000598178 DCLK3Q9C098 648 aa13.13□□□□□ -0.31
LTBP4-221ENST00000598178 GRPEL1Q9HAV7 217 aa13.13□□□□□ -0.31
LTBP4-221ENST00000598178 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.13□□□□□ -0.31
LTBP4-221ENST00000598178 BCCIPQ9P287 314 aaKnown RBP eCLIP13.13□□□□□ -0.31
LTBP4-221ENST00000598178 WDR35Q9P2L0 1181 aa13.13□□□□□ -0.31
LTBP4-221ENST00000598178 STRIP2Q9ULQ0 834 aa13.13□□□□□ -0.31
LTBP4-221ENST00000598178 ZNF510Q9Y2H8 683 aa13.13□□□□□ -0.31
LTBP4-221ENST00000598178 COQ4Q9Y3A0 265 aa13.13□□□□□ -0.31
LTBP4-221ENST00000598178 PLXND1Q9Y4D7 1925 aa13.12□□□□□ -0.31
LTBP4-221ENST00000598178 TRIM49BA6NDI0 452 aa13.12□□□□□ -0.31
LTBP4-221ENST00000598178 NEDD8-MDP1E9PL57 170 aa13.12□□□□□ -0.31
LTBP4-221ENST00000598178 H0Y626 953 aa13.12□□□□□ -0.31
LTBP4-221ENST00000598178 DCLK1O15075 740 aa13.12□□□□□ -0.31
LTBP4-221ENST00000598178 TULP3O75386 442 aa13.12□□□□□ -0.31
LTBP4-221ENST00000598178 TRIM16O95361 564 aa13.12□□□□□ -0.31
LTBP4-221ENST00000598178 KLF8O95600 359 aaPredicted RBP13.12□□□□□ -0.31
LTBP4-221ENST00000598178 CD19P15391 556 aa13.12□□□□□ -0.31
LTBP4-221ENST00000598178 TIE1P35590 1138 aa13.12□□□□□ -0.31
LTBP4-221ENST00000598178 RAD23BP54727 409 aa13.12□□□□□ -0.31
LTBP4-221ENST00000598178 COG7P83436 770 aa13.12□□□□□ -0.31
LTBP4-221ENST00000598178 LMAN2Q12907 356 aa13.12□□□□□ -0.31
LTBP4-221ENST00000598178 BYSLQ13895 437 aaKnown RBP13.12□□□□□ -0.31
LTBP4-221ENST00000598178 E2F5Q15329 346 aa13.12□□□□□ -0.31
LTBP4-221ENST00000598178 CRY1Q16526 586 aa13.12□□□□□ -0.31
LTBP4-221ENST00000598178 GAB4Q2WGN9 574 aa13.12□□□□□ -0.31
LTBP4-221ENST00000598178 SGO2Q562F6 1265 aa13.12□□□□□ -0.31
LTBP4-221ENST00000598178 C10orf76Q5T2E6 689 aa13.12□□□□□ -0.31
LTBP4-221ENST00000598178 GRAMD4Q6IC98 578 aa13.12□□□□□ -0.31
LTBP4-221ENST00000598178 SDE2Q6IQ49 451 aa13.12□□□□□ -0.31
LTBP4-221ENST00000598178 KLHL10Q6JEL2 608 aa13.12□□□□□ -0.31
LTBP4-221ENST00000598178 RASSF3Q86WH2 238 aa13.12□□□□□ -0.31
LTBP4-221ENST00000598178 C12orf40Q86WS4 652 aa13.12□□□□□ -0.31
LTBP4-221ENST00000598178 MIB1Q86YT6 1006 aa13.12□□□□□ -0.31
LTBP4-221ENST00000598178 ZNF276Q8N554 614 aa13.12□□□□□ -0.31
LTBP4-221ENST00000598178 CCDC33Q8N5R6 958 aa13.12□□□□□ -0.31
LTBP4-221ENST00000598178 ALLCQ8N6M5 410 aa13.12□□□□□ -0.31
LTBP4-221ENST00000598178 ZNF513Q8N8E2 541 aaPredicted RBP13.12□□□□□ -0.31
LTBP4-221ENST00000598178 TERB1Q8NA31 727 aa13.12□□□□□ -0.31
LTBP4-221ENST00000598178 ANKRD52Q8NB46 1076 aa13.12□□□□□ -0.31
LTBP4-221ENST00000598178 SLC4A11Q8NBS3 891 aa13.12□□□□□ -0.31
LTBP4-221ENST00000598178 TXNDC5Q8NBS9 432 aaKnown RBP13.12□□□□□ -0.31
LTBP4-221ENST00000598178 SLC35C1Q96A29 364 aa13.12□□□□□ -0.31
LTBP4-221ENST00000598178 NT5C1BQ96P26 610 aa13.12□□□□□ -0.31
LTBP4-221ENST00000598178 ARID3AQ99856 593 aa13.12□□□□□ -0.31
LTBP4-221ENST00000598178 BBS2Q9BXC9 721 aa13.12□□□□□ -0.31
LTBP4-221ENST00000598178 KLF16Q9BXK1 252 aaPredicted RBP13.12□□□□□ -0.31
LTBP4-221ENST00000598178 SLC32A1Q9H598 525 aa13.12□□□□□ -0.31
LTBP4-221ENST00000598178 LRRC4Q9HBW1 653 aa13.12□□□□□ -0.31
LTBP4-221ENST00000598178 DNAJC17Q9NVM6 304 aaKnown RBP13.12□□□□□ -0.31
LTBP4-221ENST00000598178 ACACAQ13085 2346 aa13.11□□□□□ -0.31
LTBP4-221ENST00000598178 GON4LQ3T8J9 2241 aa13.11□□□□□ -0.31
LTBP4-221ENST00000598178 FGFR1OPO95684 399 aaKnown RBP13.11□□□□□ -0.31
LTBP4-221ENST00000598178 GNA14O95837 355 aa13.11□□□□□ -0.31
LTBP4-221ENST00000598178 TBX18O95935 607 aa13.11□□□□□ -0.31
LTBP4-221ENST00000598178 TYRP14679 529 aa13.11□□□□□ -0.31
LTBP4-221ENST00000598178 CHKAP35790 457 aa13.11□□□□□ -0.31
LTBP4-221ENST00000598178 SLC6A11P48066 632 aa13.11□□□□□ -0.31
LTBP4-221ENST00000598178 FMO5P49326 533 aa13.11□□□□□ -0.31
LTBP4-221ENST00000598178 IRX4P78413 519 aa13.11□□□□□ -0.31
LTBP4-221ENST00000598178 TYRO3Q06418 890 aa13.11□□□□□ -0.31
LTBP4-221ENST00000598178 BST2Q10589 180 aaKnown RBP13.11□□□□□ -0.31
LTBP4-221ENST00000598178 GOLGA7BQ2TAP0 167 aa13.11□□□□□ -0.31
LTBP4-221ENST00000598178 FOXR2Q6PJQ5 311 aa13.11□□□□□ -0.31
LTBP4-221ENST00000598178 SASS6Q6UVJ0 657 aa13.11□□□□□ -0.31
LTBP4-221ENST00000598178 PIP4P1Q86T03 277 aa13.11□□□□□ -0.31
LTBP4-221ENST00000598178 PROSER1Q86XN7 944 aa13.11□□□□□ -0.31
LTBP4-221ENST00000598178 ETFBKMTQ8IXQ9 262 aa13.11□□□□□ -0.31
LTBP4-221ENST00000598178 SIX6OS1Q8N1H7 587 aa13.11□□□□□ -0.31
LTBP4-221ENST00000598178 NAT16Q8N8M0 369 aa13.11□□□□□ -0.31
LTBP4-221ENST00000598178 DEFB124Q8NES8 71 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms