RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	GDPD2	Q9HCC8	539 aa		11.07	□□□□□ -0.64
LSM4-205	ENST00000597776	CISH	Q9NSE2	258 aa		11.07	□□□□□ -0.64
LSM4-205	ENST00000597776	RASAL2	Q9UJF2	1139 aa		11.07	□□□□□ -0.64
LSM4-205	ENST00000597776	WASF3	Q9UPY6	502 aa		11.07	□□□□□ -0.64
LSM4-205	ENST00000597776	USP3	Q9Y6I4	520 aa		11.07	□□□□□ -0.64
LSM4-205	ENST00000597776	WDFY3	Q8IZQ1	3526 aa		11.06	□□□□□ -0.64
LSM4-205	ENST00000597776	ZZEF1	O43149	2961 aa		11.06	□□□□□ -0.64
LSM4-205	ENST00000597776	ZBTB24	O43167	697 aa	Predicted RBP	11.06	□□□□□ -0.64
LSM4-205	ENST00000597776	RALA	P11233	206 aa		11.06	□□□□□ -0.64
LSM4-205	ENST00000597776	CORO1A	P31146	461 aa	Known RBP	11.06	□□□□□ -0.64
LSM4-205	ENST00000597776	MXI1	P50539	228 aa		11.06	□□□□□ -0.64
LSM4-205	ENST00000597776	RAD23B	P54727	409 aa		11.06	□□□□□ -0.64
LSM4-205	ENST00000597776	ZNF33A	Q06730	810 aa		11.06	□□□□□ -0.64
LSM4-205	ENST00000597776	KRT39	Q6A163	491 aa		11.06	□□□□□ -0.64
LSM4-205	ENST00000597776	KIAA1324	Q6UXG2	1013 aa	Known RBP	11.06	□□□□□ -0.64
LSM4-205	ENST00000597776	TRIML1	Q8N9V2	468 aa		11.06	□□□□□ -0.64
LSM4-205	ENST00000597776	SLC4A11	Q8NBS3	891 aa		11.06	□□□□□ -0.64
LSM4-205	ENST00000597776	NDRG1	Q92597	394 aa	Known RBP	11.06	□□□□□ -0.64
LSM4-205	ENST00000597776	MRGPRX1	Q96LB2	322 aa		11.06	□□□□□ -0.64
LSM4-205	ENST00000597776	HSPA12B	Q96MM6	686 aa		11.06	□□□□□ -0.64
LSM4-205	ENST00000597776	CLIC5	Q9NZA1	410 aa		11.06	□□□□□ -0.64
LSM4-205	ENST00000597776	SLC6A14	Q9UN76	642 aa		11.06	□□□□□ -0.64
LSM4-205	ENST00000597776	STON1	Q9Y6Q2	735 aa		11.06	□□□□□ -0.64
LSM4-205	ENST00000597776	AKAP13	Q12802	2813 aa		11.06	□□□□□ -0.64
LSM4-205	ENST00000597776	SPEG	Q15772	3267 aa		11.06	□□□□□ -0.64
LSM4-205	ENST00000597776	GON4L	Q3T8J9	2241 aa		11.05	□□□□□ -0.64
LSM4-205	ENST00000597776	CHD6	Q8TD26	2715 aa		11.05	□□□□□ -0.64
LSM4-205	ENST00000597776	SPAAR	A0A1B0GVQ0	90 aa		11.05	□□□□□ -0.64
LSM4-205	ENST00000597776		A0A1W2PQ27	194 aa		11.05	□□□□□ -0.64
LSM4-205	ENST00000597776		A0A1W2PQ64	194 aa		11.05	□□□□□ -0.64
LSM4-205	ENST00000597776		A0A1W2PQD8	194 aa		11.05	□□□□□ -0.64
LSM4-205	ENST00000597776	TULP2	O00295	520 aa		11.05	□□□□□ -0.64
LSM4-205	ENST00000597776	ZNF202	O95125	648 aa		11.05	□□□□□ -0.64
LSM4-205	ENST00000597776	PENK	P01210	267 aa	Predicted RBP	11.05	□□□□□ -0.64
LSM4-205	ENST00000597776	PROS1	P07225	676 aa		11.05	□□□□□ -0.64
LSM4-205	ENST00000597776	GTF2H1	P32780	548 aa		11.05	□□□□□ -0.64
LSM4-205	ENST00000597776	HOXD12	P35452	270 aa		11.05	□□□□□ -0.64
LSM4-205	ENST00000597776	DPP6	P42658	865 aa		11.05	□□□□□ -0.64
LSM4-205	ENST00000597776	PSEN1	P49768	467 aa		11.05	□□□□□ -0.64
LSM4-205	ENST00000597776	ATXN3	P54252	364 aa	Predicted RBP	11.05	□□□□□ -0.64
LSM4-205	ENST00000597776	MFAP3	P55082	362 aa		11.05	□□□□□ -0.64
LSM4-205	ENST00000597776	GFPT1	Q06210	699 aa	Predicted RBP	11.05	□□□□□ -0.64
LSM4-205	ENST00000597776	ENPEP	Q07075	957 aa		11.05	□□□□□ -0.64
LSM4-205	ENST00000597776	GEN1	Q17RS7	908 aa		11.05	□□□□□ -0.64
LSM4-205	ENST00000597776	DUOXA1	Q1HG43	343 aa		11.05	□□□□□ -0.64
LSM4-205	ENST00000597776	FUT11	Q495W5	492 aa		11.05	□□□□□ -0.64
LSM4-205	ENST00000597776	CBWD6	Q4V339	395 aa		11.05	□□□□□ -0.64
LSM4-205	ENST00000597776	CBWD3	Q5JTY5	395 aa		11.05	□□□□□ -0.64
LSM4-205	ENST00000597776	CBWD5	Q5RIA9	395 aa		11.05	□□□□□ -0.64
LSM4-205	ENST00000597776	FYB2	Q5VWT5	728 aa		11.05	□□□□□ -0.64
LSM4-205	ENST00000597776	UNQ6494/PRO21346	Q6UXR6	183 aa		11.05	□□□□□ -0.64
LSM4-205	ENST00000597776	TADA2B	Q86TJ2	420 aa		11.05	□□□□□ -0.64
LSM4-205	ENST00000597776	PIGZ	Q86VD9	579 aa		11.05	□□□□□ -0.64
LSM4-205	ENST00000597776	DENND1C	Q8IV53	801 aa		11.05	□□□□□ -0.64
LSM4-205	ENST00000597776	FBXL13	Q8NEE6	735 aa		11.05	□□□□□ -0.64
LSM4-205	ENST00000597776	TATDN2	Q93075	761 aa		11.05	□□□□□ -0.64
LSM4-205	ENST00000597776	TMEM176A	Q96HP8	235 aa		11.05	□□□□□ -0.64
LSM4-205	ENST00000597776	ADAM33	Q9BZ11	813 aa		11.05	□□□□□ -0.64
LSM4-205	ENST00000597776	DNAI2	Q9GZS0	605 aa		11.05	□□□□□ -0.64
LSM4-205	ENST00000597776	CAPN10	Q9HC96	672 aa		11.05	□□□□□ -0.64
LSM4-205	ENST00000597776	RAB20	Q9NX57	234 aa		11.05	□□□□□ -0.64
LSM4-205	ENST00000597776	MARCH2	Q9P0N8	246 aa		11.05	□□□□□ -0.64
LSM4-205	ENST00000597776	FBXO10	Q9UK96	956 aa		11.05	□□□□□ -0.64
LSM4-205	ENST00000597776	RALY	Q9UKM9	306 aa	Known RBP	11.05	□□□□□ -0.64
LSM4-205	ENST00000597776	AGO1	Q9UL18	857 aa	Known RBP	11.05	□□□□□ -0.64
LSM4-205	ENST00000597776	ASCC3	Q8N3C0	2202 aa	Known RBP	11.05	□□□□□ -0.64
LSM4-205	ENST00000597776	PCDH15	Q96QU1	1955 aa		11.05	□□□□□ -0.64
LSM4-205	ENST00000597776	CEP192	Q8TEP8	1941 aa		11.04	□□□□□ -0.64
LSM4-205	ENST00000597776	ADAMTS9	Q9P2N4	1935 aa		11.04	□□□□□ -0.64
LSM4-205	ENST00000597776	SLC12A8	A0AV02	714 aa		11.04	□□□□□ -0.64
LSM4-205	ENST00000597776	GFRA2	O00451	464 aa		11.04	□□□□□ -0.64
LSM4-205	ENST00000597776	NDUFS2	O75306	463 aa		11.04	□□□□□ -0.64
LSM4-205	ENST00000597776	ZNF217	O75362	1048 aa		11.04	□□□□□ -0.64
LSM4-205	ENST00000597776	SERPINF2	P08697	491 aa		11.04	□□□□□ -0.64
LSM4-205	ENST00000597776	EPB41	P11171	864 aa	Known RBP	11.04	□□□□□ -0.64
LSM4-205	ENST00000597776	IL12RB1	P42701	662 aa		11.04	□□□□□ -0.64
LSM4-205	ENST00000597776	YWHAG	P61981	247 aa	Known RBP eCLIP	11.04	□□□□□ -0.64
LSM4-205	ENST00000597776	COG7	P83436	770 aa		11.04	□□□□□ -0.64
LSM4-205	ENST00000597776	SEMA3B	Q13214	749 aa		11.04	□□□□□ -0.64
LSM4-205	ENST00000597776	PNOC	Q13519	176 aa		11.04	□□□□□ -0.64
LSM4-205	ENST00000597776	GOLGA7B	Q2TAP0	167 aa		11.04	□□□□□ -0.64
LSM4-205	ENST00000597776	EDRF1	Q3B7T1	1238 aa		11.04	□□□□□ -0.64
LSM4-205	ENST00000597776	DCAF17	Q5H9S7	520 aa	Predicted RBP	11.04	□□□□□ -0.64
LSM4-205	ENST00000597776	RAB41	Q5JT25	222 aa		11.04	□□□□□ -0.64
LSM4-205	ENST00000597776	ARHGAP17	Q68EM7	881 aa		11.04	□□□□□ -0.64
LSM4-205	ENST00000597776	RSRC2	Q7L4I2	434 aa	Known RBP	11.04	□□□□□ -0.64
LSM4-205	ENST00000597776	BHLHA9	Q7RTU4	235 aa		11.04	□□□□□ -0.64
LSM4-205	ENST00000597776	PIP4P1	Q86T03	277 aa		11.04	□□□□□ -0.64
LSM4-205	ENST00000597776	HDDC3	Q8N4P3	179 aa		11.04	□□□□□ -0.64
LSM4-205	ENST00000597776	ZNF276	Q8N554	614 aa		11.04	□□□□□ -0.64
LSM4-205	ENST00000597776	MINDY1	Q8N5J2	469 aa		11.04	□□□□□ -0.64
LSM4-205	ENST00000597776	CEP76	Q8TAP6	659 aa		11.04	□□□□□ -0.64
LSM4-205	ENST00000597776	SORCS1	Q8WY21	1168 aa		11.04	□□□□□ -0.64
LSM4-205	ENST00000597776	CDK5RAP1	Q96SZ6	601 aa	Known RBP	11.04	□□□□□ -0.64
LSM4-205	ENST00000597776	SCNM1	Q9BWG6	230 aa		11.04	□□□□□ -0.64
LSM4-205	ENST00000597776	ULBP1	Q9BZM6	244 aa		11.04	□□□□□ -0.64
LSM4-205	ENST00000597776	SLC32A1	Q9H598	525 aa		11.04	□□□□□ -0.64
LSM4-205	ENST00000597776	CLEC4E	Q9ULY5	219 aa		11.04	□□□□□ -0.64
LSM4-205	ENST00000597776	ZNF510	Q9Y2H8	683 aa		11.04	□□□□□ -0.64
LSM4-205	ENST00000597776	SLC27A6	Q9Y2P4	619 aa		11.04	□□□□□ -0.64

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