RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 ZNF843Q8N446 348 aa10.69□□□□□ -0.7
TRIM28-210ENST00000597618 BAP1Q92560 729 aa10.69□□□□□ -0.7
TRIM28-210ENST00000597618 EPSTI1Q96J88 318 aa10.69□□□□□ -0.7
TRIM28-210ENST00000597618 TNIP3Q96KP6 325 aa10.69□□□□□ -0.7
TRIM28-210ENST00000597618 FCRL3Q96P31 734 aaPredicted RBP10.69□□□□□ -0.7
TRIM28-210ENST00000597618 FGFBP2Q9BYJ0 223 aa10.69□□□□□ -0.7
TRIM28-210ENST00000597618 OSGEPQ9NPF4 335 aa10.69□□□□□ -0.7
TRIM28-210ENST00000597618 CYLDQ9NQC7 956 aa10.69□□□□□ -0.7
TRIM28-210ENST00000597618 HSPBP1Q9NZL4 362 aa10.69□□□□□ -0.7
TRIM28-210ENST00000597618 FBXO10Q9UK96 956 aa10.69□□□□□ -0.7
TRIM28-210ENST00000597618 ANKRD6Q9Y2G4 727 aa10.69□□□□□ -0.7
TRIM28-210ENST00000597618 PCDHGA1Q9Y5H4 931 aa10.69□□□□□ -0.7
TRIM28-210ENST00000597618 SNX11Q9Y5W9 270 aa10.69□□□□□ -0.7
TRIM28-210ENST00000597618 MGAQ8IWI9 3026 aa10.69□□□□□ -0.7
TRIM28-210ENST00000597618 KNTC1P50748 2209 aa10.69□□□□□ -0.7
TRIM28-210ENST00000597618 MYO18BQ8IUG5 2567 aa10.68□□□□□ -0.7
TRIM28-210ENST00000597618 TEX51A0A1B0GUA7 166 aa10.68□□□□□ -0.7
TRIM28-210ENST00000597618 AP1G2O75843 785 aa10.68□□□□□ -0.7
TRIM28-210ENST00000597618 TBX18O95935 607 aa10.68□□□□□ -0.7
TRIM28-210ENST00000597618 CST3P01034 146 aaPredicted RBP10.68□□□□□ -0.7
TRIM28-210ENST00000597618 PENKP01210 267 aaPredicted RBP10.68□□□□□ -0.7
TRIM28-210ENST00000597618 CDK4P11802 303 aa10.68□□□□□ -0.7
TRIM28-210ENST00000597618 ATICP31939 592 aa10.68□□□□□ -0.7
TRIM28-210ENST00000597618 COPAP53621 1224 aa10.68□□□□□ -0.7
TRIM28-210ENST00000597618 MFAP3P55082 362 aa10.68□□□□□ -0.7
TRIM28-210ENST00000597618 TRPC3Q13507 836 aa10.68□□□□□ -0.7
TRIM28-210ENST00000597618 EIF4HQ15056 248 aaKnown RBP10.68□□□□□ -0.7
TRIM28-210ENST00000597618 SNRNP35Q16560 246 aaKnown RBP10.68□□□□□ -0.7
TRIM28-210ENST00000597618 RRAGBQ5VZM2 374 aa10.68□□□□□ -0.7
TRIM28-210ENST00000597618 KLHDC10Q6PID8 442 aa10.68□□□□□ -0.7
TRIM28-210ENST00000597618 Q6ZNB5 142 aa10.68□□□□□ -0.7
TRIM28-210ENST00000597618 PAQR9Q6ZVX9 377 aa10.68□□□□□ -0.7
TRIM28-210ENST00000597618 ANKS1BQ7Z6G8 1248 aa10.68□□□□□ -0.7
TRIM28-210ENST00000597618 CACUL1Q86Y37 369 aa10.68□□□□□ -0.7
TRIM28-210ENST00000597618 SYAP1Q96A49 352 aaPredicted RBP10.68□□□□□ -0.7
TRIM28-210ENST00000597618 CGRRF1Q99675 332 aa10.68□□□□□ -0.7
TRIM28-210ENST00000597618 PANK4Q9NVE7 773 aa10.68□□□□□ -0.7
TRIM28-210ENST00000597618 PLK2Q9NYY3 685 aa10.68□□□□□ -0.7
TRIM28-210ENST00000597618 NXF1Q9UBU9 619 aaKnown RBP10.68□□□□□ -0.7
TRIM28-210ENST00000597618 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.68□□□□□ -0.7
TRIM28-210ENST00000597618 J3QKU1 62 aa10.67□□□□□ -0.7
TRIM28-210ENST00000597618 PAPSS1O43252 624 aaPredicted RBP10.67□□□□□ -0.7
TRIM28-210ENST00000597618 DFNA5O60443 496 aa10.67□□□□□ -0.7
TRIM28-210ENST00000597618 EPHX1P07099 455 aa10.67□□□□□ -0.7
TRIM28-210ENST00000597618 JUPP14923 745 aa10.67□□□□□ -0.7
TRIM28-210ENST00000597618 GJB2P29033 226 aa10.67□□□□□ -0.7
TRIM28-210ENST00000597618 PLA2G4AP47712 749 aa10.67□□□□□ -0.7
TRIM28-210ENST00000597618 PGFP49763 221 aa10.67□□□□□ -0.7
TRIM28-210ENST00000597618 SEMG2Q02383 582 aa10.67□□□□□ -0.7
TRIM28-210ENST00000597618 ZNF234Q14588 700 aa10.67□□□□□ -0.7
TRIM28-210ENST00000597618 PSMD6Q15008 389 aa10.67□□□□□ -0.7
TRIM28-210ENST00000597618 GEN1Q17RS7 908 aa10.67□□□□□ -0.7
TRIM28-210ENST00000597618 USP49Q70CQ1 688 aa10.67□□□□□ -0.7
TRIM28-210ENST00000597618 BRAPQ7Z569 592 aa10.67□□□□□ -0.7
TRIM28-210ENST00000597618 TADA2BQ86TJ2 420 aa10.67□□□□□ -0.7
TRIM28-210ENST00000597618 FAM124AQ86V42 546 aa10.67□□□□□ -0.7
TRIM28-210ENST00000597618 FUKQ8N0W3 1084 aa10.67□□□□□ -0.7
TRIM28-210ENST00000597618 CCDC127Q96BQ5 260 aa10.67□□□□□ -0.7
TRIM28-210ENST00000597618 XYLT2Q9H1B5 865 aa10.67□□□□□ -0.7
TRIM28-210ENST00000597618 C6orf106Q9H6K1 298 aaPredicted RBP10.67□□□□□ -0.7
TRIM28-210ENST00000597618 SMYD3Q9H7B4 428 aa10.67□□□□□ -0.7
TRIM28-210ENST00000597618 TM9SF3Q9HD45 589 aa10.67□□□□□ -0.7
TRIM28-210ENST00000597618 DNMT3LQ9UJW3 386 aa10.67□□□□□ -0.7
TRIM28-210ENST00000597618 SCML2Q9UQR0 700 aa10.67□□□□□ -0.7
TRIM28-210ENST00000597618 ZNF510Q9Y2H8 683 aa10.67□□□□□ -0.7
TRIM28-210ENST00000597618 AK5Q9Y6K8 562 aa10.67□□□□□ -0.7
TRIM28-210ENST00000597618 SLCO1B1Q9Y6L6 691 aa10.67□□□□□ -0.7
TRIM28-210ENST00000597618 H0Y8X5 98 aa10.66□□□□□ -0.7
TRIM28-210ENST00000597618 CYP26A1O43174 497 aa10.66□□□□□ -0.7
TRIM28-210ENST00000597618 TLX3O43711 291 aaPredicted RBP10.66□□□□□ -0.7
TRIM28-210ENST00000597618 RFPL3O75679 317 aa10.66□□□□□ -0.7
TRIM28-210ENST00000597618 CLSTN1O94985 981 aa10.66□□□□□ -0.7
TRIM28-210ENST00000597618 C1SP09871 688 aa10.66□□□□□ -0.7
TRIM28-210ENST00000597618 PRKCHP24723 683 aa10.66□□□□□ -0.7
TRIM28-210ENST00000597618 CD27P26842 260 aa10.66□□□□□ -0.7
TRIM28-210ENST00000597618 CHKAP35790 457 aa10.66□□□□□ -0.7
TRIM28-210ENST00000597618 CTSKP43235 329 aa10.66□□□□□ -0.7
TRIM28-210ENST00000597618 MAP3K7CLP57077 242 aa10.66□□□□□ -0.7
TRIM28-210ENST00000597618 MYL6P60660 151 aa10.66□□□□□ -0.7
TRIM28-210ENST00000597618 ARID5AQ03989 594 aa10.66□□□□□ -0.7
TRIM28-210ENST00000597618 CYP24A1Q07973 514 aa10.66□□□□□ -0.7
TRIM28-210ENST00000597618 FYB2Q5VWT5 728 aa10.66□□□□□ -0.7
TRIM28-210ENST00000597618 SERPINA13PQ6UXR4 307 aa10.66□□□□□ -0.7
TRIM28-210ENST00000597618 CCDC73Q6ZRK6 1079 aa10.66□□□□□ -0.7
TRIM28-210ENST00000597618 GPR155Q7Z3F1 870 aa10.66□□□□□ -0.7
TRIM28-210ENST00000597618 ADAT2Q7Z6V5 191 aaKnown RBP10.66□□□□□ -0.7
TRIM28-210ENST00000597618 CCDC65Q8IXS2 484 aa10.66□□□□□ -0.7
TRIM28-210ENST00000597618 ZMIZ2Q8NF64 920 aa10.66□□□□□ -0.7
TRIM28-210ENST00000597618 OR2T3Q8NH03 318 aa10.66□□□□□ -0.7
TRIM28-210ENST00000597618 SNIP1Q8TAD8 396 aaKnown RBP10.66□□□□□ -0.7
TRIM28-210ENST00000597618 SLC2A14Q8TDB8 520 aa10.66□□□□□ -0.7
TRIM28-210ENST00000597618 PIWIL1Q96J94 861 aaKnown RBP10.66□□□□□ -0.7
TRIM28-210ENST00000597618 SMOQ99835 787 aa10.66□□□□□ -0.7
TRIM28-210ENST00000597618 CIPCQ9C0C6 399 aa10.66□□□□□ -0.7
TRIM28-210ENST00000597618 NRSN2Q9GZP1 204 aa10.66□□□□□ -0.7
TRIM28-210ENST00000597618 LHX5Q9H2C1 402 aa10.66□□□□□ -0.7
TRIM28-210ENST00000597618 VRTNQ9H8Y1 702 aa10.66□□□□□ -0.7
TRIM28-210ENST00000597618 CSNK1G1Q9HCP0 422 aa10.66□□□□□ -0.7
TRIM28-210ENST00000597618 OSER1Q9NX31 292 aa10.66□□□□□ -0.7
TRIM28-210ENST00000597618 ELOVL2Q9NXB9 296 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms