RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 EXD1Q8NHP7 514 aa15.26■□□□□ 0.03
VRK3-212ENST00000596814 TEKT4Q8WW24 435 aa15.26■□□□□ 0.03
VRK3-212ENST00000596814 HSPH1Q92598 858 aa15.26■□□□□ 0.03
VRK3-212ENST00000596814 ACSF2Q96CM8 615 aaPredicted RBP15.26■□□□□ 0.03
VRK3-212ENST00000596814 SNRNP25Q9BV90 132 aaKnown RBP15.26■□□□□ 0.03
VRK3-212ENST00000596814 NSUN3Q9H649 340 aaKnown RBP15.26■□□□□ 0.03
VRK3-212ENST00000596814 CCSER2Q9H7U1 834 aa15.26■□□□□ 0.03
VRK3-212ENST00000596814 IL21Q9HBE4 155 aa15.26■□□□□ 0.03
VRK3-212ENST00000596814 WDR6Q9NNW5 1121 aaKnown RBP15.26■□□□□ 0.03
VRK3-212ENST00000596814 ASAH2Q9NR71 780 aa15.26■□□□□ 0.03
VRK3-212ENST00000596814 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.26■□□□□ 0.03
VRK3-212ENST00000596814 SFMBT1Q9UHJ3 866 aa15.26■□□□□ 0.03
VRK3-212ENST00000596814 TMEM265A0A087WTH1 108 aa15.25■□□□□ 0.03
VRK3-212ENST00000596814 MDM4O15151 490 aa15.25■□□□□ 0.03
VRK3-212ENST00000596814 MSI1O43347 362 aaKnown RBP15.25■□□□□ 0.03
VRK3-212ENST00000596814 CEP104O60308 925 aa15.25■□□□□ 0.03
VRK3-212ENST00000596814 XYLBO75191 536 aa15.25■□□□□ 0.03
VRK3-212ENST00000596814 F11P03951 625 aa15.25■□□□□ 0.03
VRK3-212ENST00000596814 RARAP10276 462 aa15.25■□□□□ 0.03
VRK3-212ENST00000596814 TUBP50607 506 aa15.25■□□□□ 0.03
VRK3-212ENST00000596814 EFEMP1Q12805 493 aa15.25■□□□□ 0.03
VRK3-212ENST00000596814 WHAMMP3Q1A5X7 153 aa15.25■□□□□ 0.03
VRK3-212ENST00000596814 BOLA3Q53S33 107 aa15.25■□□□□ 0.03
VRK3-212ENST00000596814 HECTD3Q5T447 861 aa15.25■□□□□ 0.03
VRK3-212ENST00000596814 CCDC50Q8IVM0 306 aa15.25■□□□□ 0.03
VRK3-212ENST00000596814 ZNF276Q8N554 614 aa15.25■□□□□ 0.03
VRK3-212ENST00000596814 CCDC185Q8N715 623 aa15.25■□□□□ 0.03
VRK3-212ENST00000596814 RBM41Q96IZ5 413 aaKnown RBP15.25■□□□□ 0.03
VRK3-212ENST00000596814 GCNAQ96QF7 691 aa15.25■□□□□ 0.03
VRK3-212ENST00000596814 CORO1BQ9BR76 489 aa15.25■□□□□ 0.03
VRK3-212ENST00000596814 LRRC3Q9BY71 257 aa15.25■□□□□ 0.03
VRK3-212ENST00000596814 L2HGDHQ9H9P8 463 aa15.25■□□□□ 0.03
VRK3-212ENST00000596814 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.25■□□□□ 0.03
VRK3-212ENST00000596814 TMEM51Q9NW97 253 aa15.25■□□□□ 0.03
VRK3-212ENST00000596814 RASAL2Q9UJF2 1139 aa15.25■□□□□ 0.03
VRK3-212ENST00000596814 TRIOBPQ9H2D6 2365 aa15.24■□□□□ 0.03
VRK3-212ENST00000596814 CDH23Q9H251 3354 aa15.24■□□□□ 0.03
VRK3-212ENST00000596814 LRRD1A4D1F6 860 aa15.24■□□□□ 0.03
VRK3-212ENST00000596814 ZRANB2O95218 330 aaKnown RBP eCLIP15.24■□□□□ 0.03
VRK3-212ENST00000596814 TBX18O95935 607 aa15.24■□□□□ 0.03
VRK3-212ENST00000596814 POU2F2P09086 479 aa15.24■□□□□ 0.03
VRK3-212ENST00000596814 PYGMP11217 842 aa15.24■□□□□ 0.03
VRK3-212ENST00000596814 GABRR2P28476 465 aa15.24■□□□□ 0.03
VRK3-212ENST00000596814 CDC25CP30307 473 aa15.24■□□□□ 0.03
VRK3-212ENST00000596814 CXCR3P49682 368 aa15.24■□□□□ 0.03
VRK3-212ENST00000596814 EIF4EBP2Q13542 120 aaPredicted RBP15.24■□□□□ 0.03
VRK3-212ENST00000596814 ERMARDQ5T6L9 678 aa15.24■□□□□ 0.03
VRK3-212ENST00000596814 CCDC181Q5TID7 509 aa15.24■□□□□ 0.03
VRK3-212ENST00000596814 TMEM150AQ86TG1 271 aa15.24■□□□□ 0.03
VRK3-212ENST00000596814 CREG2Q8IUH2 290 aa15.24■□□□□ 0.03
VRK3-212ENST00000596814 HS6ST3Q8IZP7 471 aa15.24■□□□□ 0.03
VRK3-212ENST00000596814 NTAN1Q96AB6 310 aa15.24■□□□□ 0.03
VRK3-212ENST00000596814 NACA2Q9H009 215 aa15.24■□□□□ 0.03
VRK3-212ENST00000596814 MARCH2Q9P0N8 246 aa15.24■□□□□ 0.03
VRK3-212ENST00000596814 AP4E1Q9UPM8 1137 aa15.24■□□□□ 0.03
VRK3-212ENST00000596814 PI4K2BG5E9Z4 385 aa15.23■□□□□ 0.03
VRK3-212ENST00000596814 ATP5C1P36542 298 aaKnown RBP15.23■□□□□ 0.03
VRK3-212ENST00000596814 AIF1P55008 147 aa15.23■□□□□ 0.03
VRK3-212ENST00000596814 RBM10P98175 930 aaKnown RBP15.23■□□□□ 0.03
VRK3-212ENST00000596814 CKAP4Q07065 602 aaKnown RBP15.23■□□□□ 0.03
VRK3-212ENST00000596814 NNTQ13423 1086 aa15.23■□□□□ 0.03
VRK3-212ENST00000596814 KCNC3Q14003 757 aa15.23■□□□□ 0.03
VRK3-212ENST00000596814 ARL13BQ3SXY8 428 aa15.23■□□□□ 0.03
VRK3-212ENST00000596814 BRMS1LQ5PSV4 323 aa15.23■□□□□ 0.03
VRK3-212ENST00000596814 ZNF697Q5TEC3 545 aa15.23■□□□□ 0.03
VRK3-212ENST00000596814 AADACL2Q6P093 401 aa15.23■□□□□ 0.03
VRK3-212ENST00000596814 KLHDC10Q6PID8 442 aa15.23■□□□□ 0.03
VRK3-212ENST00000596814 MIB1Q86YT6 1006 aa15.23■□□□□ 0.03
VRK3-212ENST00000596814 RCOR2Q8IZ40 523 aa15.23■□□□□ 0.03
VRK3-212ENST00000596814 RASGEF1CQ8N431 466 aa15.23■□□□□ 0.03
VRK3-212ENST00000596814 VN1R2Q8NFZ6 395 aa15.23■□□□□ 0.03
VRK3-212ENST00000596814 RAPGEF5Q92565 580 aa15.23■□□□□ 0.03
VRK3-212ENST00000596814 MRPS31Q92665 395 aaKnown RBP15.23■□□□□ 0.03
VRK3-212ENST00000596814 RNF34Q969K3 372 aa15.23■□□□□ 0.03
VRK3-212ENST00000596814 RNF25Q96BH1 459 aaPredicted RBP15.23■□□□□ 0.03
VRK3-212ENST00000596814 MS4A14Q96JA4 679 aa15.23■□□□□ 0.03
VRK3-212ENST00000596814 PRKD2Q9BZL6 878 aa15.23■□□□□ 0.03
VRK3-212ENST00000596814 WDCPQ9H6R7 721 aa15.23■□□□□ 0.03
VRK3-212ENST00000596814 DZANK1Q9NVP4 752 aa15.23■□□□□ 0.03
VRK3-212ENST00000596814 GPATCH2LQ9NWQ4 482 aa15.23■□□□□ 0.03
VRK3-212ENST00000596814 HCFC1R1Q9NWW0 138 aa15.23■□□□□ 0.03
VRK3-212ENST00000596814 RNF14Q9UBS8 474 aa15.23■□□□□ 0.03
VRK3-212ENST00000596814 DNMT3LQ9UJW3 386 aa15.23■□□□□ 0.03
VRK3-212ENST00000596814 FZD10Q9ULW2 581 aa15.23■□□□□ 0.03
VRK3-212ENST00000596814 TLR6Q9Y2C9 796 aa15.23■□□□□ 0.03
VRK3-212ENST00000596814 PGRMC1O00264 195 aaKnown RBP15.23■□□□□ 0.03
VRK3-212ENST00000596814 FGF19O95750 216 aa15.23■□□□□ 0.03
VRK3-212ENST00000596814 OAS1P00973 400 aaKnown RBP15.23■□□□□ 0.03
VRK3-212ENST00000596814 MYL4P12829 197 aa15.23■□□□□ 0.03
VRK3-212ENST00000596814 PTPN2P17706 415 aa15.23■□□□□ 0.03
VRK3-212ENST00000596814 CCR1P32246 355 aa15.23■□□□□ 0.03
VRK3-212ENST00000596814 GTF2F1P35269 517 aaKnown RBP eCLIP15.23■□□□□ 0.03
VRK3-212ENST00000596814 CETN2P41208 172 aa15.23■□□□□ 0.03
VRK3-212ENST00000596814 PAFAH1B1P43034 410 aa15.23■□□□□ 0.03
VRK3-212ENST00000596814 EPHA5P54756 1037 aa15.23■□□□□ 0.03
VRK3-212ENST00000596814 CDH6P55285 790 aa15.23■□□□□ 0.03
VRK3-212ENST00000596814 TBX4P57082 545 aa15.23■□□□□ 0.03
VRK3-212ENST00000596814 KRT81Q14533 505 aa15.23■□□□□ 0.03
VRK3-212ENST00000596814 ZC3H12AQ5D1E8 599 aaKnown RBP15.23■□□□□ 0.03
VRK3-212ENST00000596814 TCEAL5Q5H9L2 206 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms