RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 ACO1P21399 889 aaKnown RBP10.5□□□□□ -0.73
LIG1-209ENST00000596104 ADORA2BP29275 332 aa10.5□□□□□ -0.73
LIG1-209ENST00000596104 PI4KAP42356 2102 aa10.5□□□□□ -0.73
LIG1-209ENST00000596104 IL12RB1P42701 662 aa10.5□□□□□ -0.73
LIG1-209ENST00000596104 ASPAP45381 313 aa10.5□□□□□ -0.73
LIG1-209ENST00000596104 PLA2G4AP47712 749 aa10.5□□□□□ -0.73
LIG1-209ENST00000596104 MFAP3P55082 362 aa10.5□□□□□ -0.73
LIG1-209ENST00000596104 BNC1Q01954 994 aa10.5□□□□□ -0.73
LIG1-209ENST00000596104 INCA1Q0VD86 236 aa10.5□□□□□ -0.73
LIG1-209ENST00000596104 CUL4BQ13620 913 aa10.5□□□□□ -0.73
LIG1-209ENST00000596104 GEN1Q17RS7 908 aa10.5□□□□□ -0.73
LIG1-209ENST00000596104 SGSM1Q2NKQ1 1148 aa10.5□□□□□ -0.73
LIG1-209ENST00000596104 C1orf220Q5T0J3 134 aa10.5□□□□□ -0.73
LIG1-209ENST00000596104 FYB2Q5VWT5 728 aa10.5□□□□□ -0.73
LIG1-209ENST00000596104 SPOPLQ6IQ16 392 aa10.5□□□□□ -0.73
LIG1-209ENST00000596104 SV2AQ7L0J3 742 aa10.5□□□□□ -0.73
LIG1-209ENST00000596104 SLCO6A1Q86UG4 719 aa10.5□□□□□ -0.73
LIG1-209ENST00000596104 ZNF276Q8N554 614 aa10.5□□□□□ -0.73
LIG1-209ENST00000596104 PNPLA1Q8N8W4 532 aa10.5□□□□□ -0.73
LIG1-209ENST00000596104 CADM4Q8NFZ8 388 aa10.5□□□□□ -0.73
LIG1-209ENST00000596104 GOLGA5Q8TBA6 731 aa10.5□□□□□ -0.73
LIG1-209ENST00000596104 TAF4BQ92750 862 aa10.5□□□□□ -0.73
LIG1-209ENST00000596104 PRDM16Q9HAZ2 1276 aa10.5□□□□□ -0.73
LIG1-209ENST00000596104 PNPLA8Q9NP80 782 aa10.5□□□□□ -0.73
LIG1-209ENST00000596104 ITM2CQ9NQX7 267 aa10.5□□□□□ -0.73
LIG1-209ENST00000596104 THAP10Q9P2Z0 257 aaPredicted RBP10.5□□□□□ -0.73
LIG1-209ENST00000596104 DNMT3LQ9UJW3 386 aa10.5□□□□□ -0.73
LIG1-209ENST00000596104 NUDT5Q9UKK9 219 aa10.5□□□□□ -0.73
LIG1-209ENST00000596104 PCOLCE2Q9UKZ9 415 aa10.5□□□□□ -0.73
LIG1-209ENST00000596104 PCDHA5Q9Y5H7 936 aa10.5□□□□□ -0.73
LIG1-209ENST00000596104 ITPR1Q14643 2758 aa10.49□□□□□ -0.73
LIG1-209ENST00000596104 KLRC4O43908 158 aa10.49□□□□□ -0.73
LIG1-209ENST00000596104 CLSTN1O94985 981 aa10.49□□□□□ -0.73
LIG1-209ENST00000596104 IGLV3-19P01714 112 aa10.49□□□□□ -0.73
LIG1-209ENST00000596104 ZNF883P0CG24 379 aa10.49□□□□□ -0.73
LIG1-209ENST00000596104 NCAM1P13591 858 aa10.49□□□□□ -0.73
LIG1-209ENST00000596104 KIF11P52732 1056 aa10.49□□□□□ -0.73
LIG1-209ENST00000596104 ZNF132P52740 706 aa10.49□□□□□ -0.73
LIG1-209ENST00000596104 STK4Q13043 487 aa10.49□□□□□ -0.73
LIG1-209ENST00000596104 STARD3Q14849 445 aa10.49□□□□□ -0.73
LIG1-209ENST00000596104 C10orf120Q5SQS8 335 aa10.49□□□□□ -0.73
LIG1-209ENST00000596104 CCDC186Q7Z3E2 898 aa10.49□□□□□ -0.73
LIG1-209ENST00000596104 ZCCHC9Q8N567 271 aaKnown RBP10.49□□□□□ -0.73
LIG1-209ENST00000596104 RBBP8NLQ8NC74 664 aaPredicted RBP10.49□□□□□ -0.73
LIG1-209ENST00000596104 KIAA0895Q8NCT3 520 aa10.49□□□□□ -0.73
LIG1-209ENST00000596104 C1orf216Q8TAB5 229 aa10.49□□□□□ -0.73
LIG1-209ENST00000596104 TMC2Q8TDI7 906 aa10.49□□□□□ -0.73
LIG1-209ENST00000596104 JAKMIP2Q96AA8 810 aa10.49□□□□□ -0.73
LIG1-209ENST00000596104 GPR174Q9BXC1 333 aa10.49□□□□□ -0.73
LIG1-209ENST00000596104 BACH2Q9BYV9 841 aa10.49□□□□□ -0.73
LIG1-209ENST00000596104 KCTD10Q9H3F6 313 aa10.49□□□□□ -0.73
LIG1-209ENST00000596104 IL21RQ9HBE5 538 aa10.49□□□□□ -0.73
LIG1-209ENST00000596104 APOBEC2Q9Y235 224 aaKnown RBP10.49□□□□□ -0.73
LIG1-209ENST00000596104 PCDHB9Q9Y5E1 797 aa10.49□□□□□ -0.73
LIG1-209ENST00000596104 WDFY3Q8IZQ1 3526 aa10.49□□□□□ -0.73
LIG1-209ENST00000596104 METTL12A8MUP2 240 aa10.48□□□□□ -0.73
LIG1-209ENST00000596104 MEI4A8MW99 385 aa10.48□□□□□ -0.73
LIG1-209ENST00000596104 NPC1O15118 1278 aa10.48□□□□□ -0.73
LIG1-209ENST00000596104 DKK1O94907 266 aa10.48□□□□□ -0.73
LIG1-209ENST00000596104 HLA-DRAP01903 254 aa10.48□□□□□ -0.73
LIG1-209ENST00000596104 AFMP43652 599 aa10.48□□□□□ -0.73
LIG1-209ENST00000596104 TPMTP51580 245 aa10.48□□□□□ -0.73
LIG1-209ENST00000596104 COPAP53621 1224 aa10.48□□□□□ -0.73
LIG1-209ENST00000596104 C19orf48Q6RUI8 117 aa10.48□□□□□ -0.73
LIG1-209ENST00000596104 DBX2Q6ZNG2 339 aa10.48□□□□□ -0.73
LIG1-209ENST00000596104 TMPRSS6Q8IU80 811 aa10.48□□□□□ -0.73
LIG1-209ENST00000596104 GRAMD1CQ8IYS0 662 aa10.48□□□□□ -0.73
LIG1-209ENST00000596104 BAHD1Q8TBE0 780 aaPredicted RBP10.48□□□□□ -0.73
LIG1-209ENST00000596104 CYFIP2Q96F07 1278 aa10.48□□□□□ -0.73
LIG1-209ENST00000596104 PIWIL1Q96J94 861 aaKnown RBP10.48□□□□□ -0.73
LIG1-209ENST00000596104 ZNF396Q96N95 335 aaPredicted RBP10.48□□□□□ -0.73
LIG1-209ENST00000596104 CCDC86Q9H6F5 360 aaKnown RBP10.48□□□□□ -0.73
LIG1-209ENST00000596104 APOBEC3GQ9HC16 384 aaKnown RBP10.48□□□□□ -0.73
LIG1-209ENST00000596104 FOXD4L1Q9NU39 408 aa10.48□□□□□ -0.73
LIG1-209ENST00000596104 TOR4AQ9NXH8 423 aa10.48□□□□□ -0.73
LIG1-209ENST00000596104 CLIC5Q9NZA1 410 aa10.48□□□□□ -0.73
LIG1-209ENST00000596104 KIAA1522Q9P206 1035 aaPredicted RBP10.48□□□□□ -0.73
LIG1-209ENST00000596104 NAGPAQ9UK23 515 aa10.48□□□□□ -0.73
LIG1-209ENST00000596104 CLEC4EQ9ULY5 219 aa10.48□□□□□ -0.73
LIG1-209ENST00000596104 FNDC3AQ9Y2H6 1198 aaKnown RBP10.48□□□□□ -0.73
LIG1-209ENST00000596104 USP3Q9Y6I4 520 aa10.48□□□□□ -0.73
LIG1-209ENST00000596104 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.47□□□□□ -0.73
LIG1-209ENST00000596104 PDXKO00764 312 aa10.47□□□□□ -0.73
LIG1-209ENST00000596104 IKBKBO14920 756 aa10.47□□□□□ -0.73
LIG1-209ENST00000596104 BCAT2O15382 392 aaPredicted RBP10.47□□□□□ -0.73
LIG1-209ENST00000596104 CILPO75339 1184 aa10.47□□□□□ -0.73
LIG1-209ENST00000596104 NR3C1P04150 777 aa10.47□□□□□ -0.73
LIG1-209ENST00000596104 C7P10643 843 aa10.47□□□□□ -0.73
LIG1-209ENST00000596104 PRKCHP24723 683 aa10.47□□□□□ -0.73
LIG1-209ENST00000596104 OXTRP30559 389 aa10.47□□□□□ -0.73
LIG1-209ENST00000596104 CORO1AP31146 461 aaKnown RBP10.47□□□□□ -0.73
LIG1-209ENST00000596104 CHKAP35790 457 aa10.47□□□□□ -0.73
LIG1-209ENST00000596104 PIK3CAP42336 1068 aa10.47□□□□□ -0.73
LIG1-209ENST00000596104 PSEN1P49768 467 aa10.47□□□□□ -0.73
LIG1-209ENST00000596104 COG7P83436 770 aa10.47□□□□□ -0.73
LIG1-209ENST00000596104 ZNF234Q14588 700 aa10.47□□□□□ -0.73
LIG1-209ENST00000596104 EIF4HQ15056 248 aaKnown RBP10.47□□□□□ -0.73
LIG1-209ENST00000596104 COL28A1Q2UY09 1125 aa10.47□□□□□ -0.73
LIG1-209ENST00000596104 SOWAHCQ53LP3 525 aaPredicted RBP10.47□□□□□ -0.73
LIG1-209ENST00000596104 DCAF12L1Q5VU92 463 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms