RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 CORO1AP31146 461 aaKnown RBP11.49□□□□□ -0.57
SHKBP1-206ENST00000595523 HOXD11P31277 338 aaPredicted RBP11.49□□□□□ -0.57
SHKBP1-206ENST00000595523 CXCL12P48061 93 aa11.49□□□□□ -0.57
SHKBP1-206ENST00000595523 CCR3P51677 355 aa11.49□□□□□ -0.57
SHKBP1-206ENST00000595523 JAM2P57087 298 aa11.49□□□□□ -0.57
SHKBP1-206ENST00000595523 COG7P83436 770 aa11.49□□□□□ -0.57
SHKBP1-206ENST00000595523 PTK2Q05397 1052 aa11.49□□□□□ -0.57
SHKBP1-206ENST00000595523 GOLGA8FQ08AF8 430 aa11.49□□□□□ -0.57
SHKBP1-206ENST00000595523 GOLGA8DPQ0D2H9 430 aa11.49□□□□□ -0.57
SHKBP1-206ENST00000595523 IQCB1Q15051 598 aa11.49□□□□□ -0.57
SHKBP1-206ENST00000595523 SYCP1Q15431 976 aa11.49□□□□□ -0.57
SHKBP1-206ENST00000595523 TRIP4Q15650 581 aaPredicted RBP11.49□□□□□ -0.57
SHKBP1-206ENST00000595523 TMEM110Q86TL2 294 aa11.49□□□□□ -0.57
SHKBP1-206ENST00000595523 FMNL3Q8IVF7 1028 aa11.49□□□□□ -0.57
SHKBP1-206ENST00000595523 C1orf131Q8NDD1 294 aaKnown RBP11.49□□□□□ -0.57
SHKBP1-206ENST00000595523 DDX1Q92499 740 aaKnown RBP11.49□□□□□ -0.57
SHKBP1-206ENST00000595523 STK33Q9BYT3 514 aa11.49□□□□□ -0.57
SHKBP1-206ENST00000595523 ST7Q9NRC1 585 aa11.49□□□□□ -0.57
SHKBP1-206ENST00000595523 FAM207AQ9NSI2 230 aaPredicted RBP11.49□□□□□ -0.57
SHKBP1-206ENST00000595523 OLA1Q9NTK5 396 aaKnown RBP11.49□□□□□ -0.57
SHKBP1-206ENST00000595523 MARK1Q9P0L2 795 aa11.49□□□□□ -0.57
SHKBP1-206ENST00000595523 LSM7Q9UK45 103 aaKnown RBP11.49□□□□□ -0.57
SHKBP1-206ENST00000595523 AGO1Q9UL18 857 aaKnown RBP11.49□□□□□ -0.57
SHKBP1-206ENST00000595523 CEP250Q9BV73 2442 aa11.49□□□□□ -0.57
SHKBP1-206ENST00000595523 MUC22E2RYF6 1773 aaPredicted RBP11.49□□□□□ -0.57
SHKBP1-206ENST00000595523 CKAP5Q14008 2032 aa11.48□□□□□ -0.57
SHKBP1-206ENST00000595523 LAMA1P25391 3075 aa11.48□□□□□ -0.57
SHKBP1-206ENST00000595523 A0A0A0MRY4 1105 aa11.48□□□□□ -0.57
SHKBP1-206ENST00000595523 CHURC1-FNTBB4DL54 471 aa11.48□□□□□ -0.57
SHKBP1-206ENST00000595523 CACNG3O60359 315 aa11.48□□□□□ -0.57
SHKBP1-206ENST00000595523 TULP3O75386 442 aa11.48□□□□□ -0.57
SHKBP1-206ENST00000595523 IGLV3-27P01718 113 aa11.48□□□□□ -0.57
SHKBP1-206ENST00000595523 CYP11B1P15538 503 aa11.48□□□□□ -0.57
SHKBP1-206ENST00000595523 EIF2DP41214 584 aaKnown RBP11.48□□□□□ -0.57
SHKBP1-206ENST00000595523 ACADSBP45954 432 aa11.48□□□□□ -0.57
SHKBP1-206ENST00000595523 ZNF165P49910 485 aa11.48□□□□□ -0.57
SHKBP1-206ENST00000595523 MRE11P49959 708 aa11.48□□□□□ -0.57
SHKBP1-206ENST00000595523 POLR2FP61218 127 aaKnown RBP11.48□□□□□ -0.57
SHKBP1-206ENST00000595523 GAD2Q05329 585 aa11.48□□□□□ -0.57
SHKBP1-206ENST00000595523 KDSRQ06136 332 aa11.48□□□□□ -0.57
SHKBP1-206ENST00000595523 DMWDQ09019 674 aa11.48□□□□□ -0.57
SHKBP1-206ENST00000595523 TAF5Q15542 800 aa11.48□□□□□ -0.57
SHKBP1-206ENST00000595523 PTPN20Q4JDL3 420 aa11.48□□□□□ -0.57
SHKBP1-206ENST00000595523 FKBP15Q5T1M5 1219 aa11.48□□□□□ -0.57
SHKBP1-206ENST00000595523 SYPL2Q5VXT5 272 aa11.48□□□□□ -0.57
SHKBP1-206ENST00000595523 TPGS1Q6ZTW0 290 aa11.48□□□□□ -0.57
SHKBP1-206ENST00000595523 NOP9Q86U38 636 aaKnown RBP11.48□□□□□ -0.57
SHKBP1-206ENST00000595523 ALYREFQ86V81 257 aaKnown RBP11.48□□□□□ -0.57
SHKBP1-206ENST00000595523 FAM217AQ8IXS0 508 aa11.48□□□□□ -0.57
SHKBP1-206ENST00000595523 NAT16Q8N8M0 369 aa11.48□□□□□ -0.57
SHKBP1-206ENST00000595523 ZBTB44Q8NCP5 570 aa11.48□□□□□ -0.57
SHKBP1-206ENST00000595523 RPLP0P6Q8NHW5 317 aa11.48□□□□□ -0.57
SHKBP1-206ENST00000595523 PLD4Q96BZ4 506 aa11.48□□□□□ -0.57
SHKBP1-206ENST00000595523 ERGIC2Q96RQ1 377 aa11.48□□□□□ -0.57
SHKBP1-206ENST00000595523 NAT10Q9H0A0 1025 aaKnown RBP11.48□□□□□ -0.57
SHKBP1-206ENST00000595523 LHX5Q9H2C1 402 aa11.48□□□□□ -0.57
SHKBP1-206ENST00000595523 STRIP2Q9ULQ0 834 aa11.48□□□□□ -0.57
SHKBP1-206ENST00000595523 NAALADL1Q9UQQ1 740 aa11.48□□□□□ -0.57
SHKBP1-206ENST00000595523 HBS1LQ9Y450 684 aaKnown RBP11.48□□□□□ -0.57
SHKBP1-206ENST00000595523 CEP192Q8TEP8 1941 aa11.48□□□□□ -0.57
SHKBP1-206ENST00000595523 ABCA7Q8IZY2 2146 aa11.48□□□□□ -0.57
SHKBP1-206ENST00000595523 DOCK4Q8N1I0 1966 aa11.47□□□□□ -0.57
SHKBP1-206ENST00000595523 NYNRINQ9P2P1 1898 aaKnown RBP11.47□□□□□ -0.57
SHKBP1-206ENST00000595523 NEDD8-MDP1E9PL57 170 aa11.47□□□□□ -0.57
SHKBP1-206ENST00000595523 GFRA2O00451 464 aa11.47□□□□□ -0.57
SHKBP1-206ENST00000595523 TEX33O43247 280 aa11.47□□□□□ -0.57
SHKBP1-206ENST00000595523 LILRB5O75023 590 aa11.47□□□□□ -0.57
SHKBP1-206ENST00000595523 KAT7O95251 611 aa11.47□□□□□ -0.57
SHKBP1-206ENST00000595523 PENKP01210 267 aaPredicted RBP11.47□□□□□ -0.57
SHKBP1-206ENST00000595523 ERBB2P04626 1255 aa11.47□□□□□ -0.57
SHKBP1-206ENST00000595523 TPM2P07951 284 aa11.47□□□□□ -0.57
SHKBP1-206ENST00000595523 TYRP14679 529 aa11.47□□□□□ -0.57
SHKBP1-206ENST00000595523 CDH5P33151 784 aaPredicted RBP11.47□□□□□ -0.57
SHKBP1-206ENST00000595523 SEC13P55735 322 aa11.47□□□□□ -0.57
SHKBP1-206ENST00000595523 PITX1P78337 314 aaPredicted RBP11.47□□□□□ -0.57
SHKBP1-206ENST00000595523 UBXN1Q04323 297 aa11.47□□□□□ -0.57
SHKBP1-206ENST00000595523 ANO4Q32M45 955 aa11.47□□□□□ -0.57
SHKBP1-206ENST00000595523 FBXO43Q4G163 708 aa11.47□□□□□ -0.57
SHKBP1-206ENST00000595523 ASCL5Q7RTU5 278 aa11.47□□□□□ -0.57
SHKBP1-206ENST00000595523 DENND1CQ8IV53 801 aa11.47□□□□□ -0.57
SHKBP1-206ENST00000595523 EPS8L1Q8TE68 723 aa11.47□□□□□ -0.57
SHKBP1-206ENST00000595523 DQX1Q8TE96 717 aaKnown RBP11.47□□□□□ -0.57
SHKBP1-206ENST00000595523 USP33Q8TEY7 942 aa11.47□□□□□ -0.57
SHKBP1-206ENST00000595523 RNF139Q8WU17 664 aa11.47□□□□□ -0.57
SHKBP1-206ENST00000595523 PPP1R13BQ96KQ4 1090 aa11.47□□□□□ -0.57
SHKBP1-206ENST00000595523 PNKPQ96T60 521 aa11.47□□□□□ -0.57
SHKBP1-206ENST00000595523 BBS2Q9BXC9 721 aa11.47□□□□□ -0.57
SHKBP1-206ENST00000595523 DCLK3Q9C098 648 aa11.47□□□□□ -0.57
SHKBP1-206ENST00000595523 NLRC4Q9NPP4 1024 aa11.47□□□□□ -0.57
SHKBP1-206ENST00000595523 ARHGEF4Q9NR80 690 aa11.47□□□□□ -0.57
SHKBP1-206ENST00000595523 PLK2Q9NYY3 685 aa11.47□□□□□ -0.57
SHKBP1-206ENST00000595523 STOML2Q9UJZ1 356 aa11.47□□□□□ -0.57
SHKBP1-206ENST00000595523 NOCTQ9UK39 431 aaKnown RBP11.47□□□□□ -0.57
SHKBP1-206ENST00000595523 HCN2Q9UL51 889 aa11.47□□□□□ -0.57
SHKBP1-206ENST00000595523 NUP205Q92621 2012 aa11.47□□□□□ -0.57
SHKBP1-206ENST00000595523 FAM170AA1A519 330 aa11.46□□□□□ -0.57
SHKBP1-206ENST00000595523 PRR23AA6NEV1 266 aa11.46□□□□□ -0.57
SHKBP1-206ENST00000595523 SART1O43290 800 aaKnown RBP11.46□□□□□ -0.57
SHKBP1-206ENST00000595523 GFPT2O94808 682 aa11.46□□□□□ -0.57
SHKBP1-206ENST00000595523 IGLV3-25P01717 112 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms