RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 IP6K2Q9UHH9 426 aa15.97■□□□□ 0.15
PNKP-204ENST00000594661 STARD13Q9Y3M8 1113 aa15.97■□□□□ 0.15
PNKP-204ENST00000594661 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.97■□□□□ 0.15
PNKP-204ENST00000594661 HGSO14964 777 aaPredicted RBP15.96■□□□□ 0.15
PNKP-204ENST00000594661 RIPK2O43353 540 aa15.96■□□□□ 0.15
PNKP-204ENST00000594661 PSMG1O95456 288 aa15.96■□□□□ 0.15
PNKP-204ENST00000594661 RALAP11233 206 aa15.96■□□□□ 0.15
PNKP-204ENST00000594661 CYP3A5P20815 502 aa15.96■□□□□ 0.15
PNKP-204ENST00000594661 PSMD7P51665 324 aa15.96■□□□□ 0.15
PNKP-204ENST00000594661 OGDHQ02218 1023 aa15.96■□□□□ 0.15
PNKP-204ENST00000594661 KCNA10Q16322 511 aa15.96■□□□□ 0.15
PNKP-204ENST00000594661 TWF2Q6IBS0 349 aaKnown RBP15.96■□□□□ 0.15
PNKP-204ENST00000594661 DPH6Q7L8W6 267 aa15.96■□□□□ 0.15
PNKP-204ENST00000594661 KBTBD2Q8IY47 623 aa15.96■□□□□ 0.15
PNKP-204ENST00000594661 CPXM1Q96SM3 734 aa15.96■□□□□ 0.15
PNKP-204ENST00000594661 DDX50Q9BQ39 737 aaKnown RBP15.96■□□□□ 0.15
PNKP-204ENST00000594661 PTTG2Q9NZH5 202 aa15.96■□□□□ 0.15
PNKP-204ENST00000594661 UBQLN1Q9UMX0 589 aaKnown RBP15.96■□□□□ 0.15
PNKP-204ENST00000594661 NME7Q9Y5B8 376 aa15.96■□□□□ 0.15
PNKP-204ENST00000594661 TRPV2Q9Y5S1 764 aa15.96■□□□□ 0.15
PNKP-204ENST00000594661 SMIM31A0A1B0GVY4 71 aa15.95■□□□□ 0.14
PNKP-204ENST00000594661 M0QYV0 167 aa15.95■□□□□ 0.14
PNKP-204ENST00000594661 CAPN9O14815 690 aa15.95■□□□□ 0.14
PNKP-204ENST00000594661 TBX10O75333 385 aa15.95■□□□□ 0.14
PNKP-204ENST00000594661 ZCCHC18P0CG32 403 aa15.95■□□□□ 0.14
PNKP-204ENST00000594661 PIM1P11309 404 aaPredicted RBP15.95■□□□□ 0.14
PNKP-204ENST00000594661 VDRP11473 427 aa15.95■□□□□ 0.14
PNKP-204ENST00000594661 VARSP26640 1264 aaKnown RBP15.95■□□□□ 0.14
PNKP-204ENST00000594661 MAN1A1P33908 653 aa15.95■□□□□ 0.14
PNKP-204ENST00000594661 SLCO1A2P46721 670 aa15.95■□□□□ 0.14
PNKP-204ENST00000594661 KRT17Q04695 432 aa15.95■□□□□ 0.14
PNKP-204ENST00000594661 SOX4Q06945 474 aaPredicted RBP15.95■□□□□ 0.14
PNKP-204ENST00000594661 DEFB115Q30KQ5 88 aa15.95■□□□□ 0.14
PNKP-204ENST00000594661 XKR4Q5GH76 650 aa15.95■□□□□ 0.14
PNKP-204ENST00000594661 SERINC5Q86VE9 423 aa15.95■□□□□ 0.14
PNKP-204ENST00000594661 KATNAL2Q8IYT4 538 aa15.95■□□□□ 0.14
PNKP-204ENST00000594661 LRRC52Q8N7C0 313 aa15.95■□□□□ 0.14
PNKP-204ENST00000594661 SLCO2A1Q92959 643 aa15.95■□□□□ 0.14
PNKP-204ENST00000594661 ARHGEF2Q92974 986 aaKnown RBP15.95■□□□□ 0.14
PNKP-204ENST00000594661 GOLGA2P5Q9HBQ8 144 aa15.95■□□□□ 0.14
PNKP-204ENST00000594661 THSD7BQ9C0I4 1608 aa15.95■□□□□ 0.14
PNKP-204ENST00000594661 hCG_2014768A0A024R1R8 64 aa15.95■□□□□ 0.14
PNKP-204ENST00000594661 M0QZ92 97 aa15.95■□□□□ 0.14
PNKP-204ENST00000594661 KRT36O76013 467 aa15.95■□□□□ 0.14
PNKP-204ENST00000594661 TOMM70O94826 608 aa15.95■□□□□ 0.14
PNKP-204ENST00000594661 CHRNA1P02708 482 aa15.95■□□□□ 0.14
PNKP-204ENST00000594661 TCF4P15884 667 aa15.95■□□□□ 0.14
PNKP-204ENST00000594661 TAC1P20366 129 aa15.95■□□□□ 0.14
PNKP-204ENST00000594661 ATP5DP30049 168 aa15.95■□□□□ 0.14
PNKP-204ENST00000594661 CALCOCO2Q13137 446 aa15.95■□□□□ 0.14
PNKP-204ENST00000594661 ITGA9Q13797 1035 aa15.95■□□□□ 0.14
PNKP-204ENST00000594661 UBAP2Q5T6F2 1119 aaKnown RBP15.95■□□□□ 0.14
PNKP-204ENST00000594661 CCSAPQ6IQ19 270 aaPredicted RBP15.95■□□□□ 0.14
PNKP-204ENST00000594661 RFWD3Q6PCD5 774 aa15.95■□□□□ 0.14
PNKP-204ENST00000594661 DCUN1D2Q6PH85 259 aa15.95■□□□□ 0.14
PNKP-204ENST00000594661 ST13P4Q8IZP2 240 aaPredicted RBP15.95■□□□□ 0.14
PNKP-204ENST00000594661 C12orf29Q8N999 325 aa15.95■□□□□ 0.14
PNKP-204ENST00000594661 KLHDC9Q8NEP7 349 aa15.95■□□□□ 0.14
PNKP-204ENST00000594661 ART4Q93070 314 aa15.95■□□□□ 0.14
PNKP-204ENST00000594661 HAUS1Q96CS2 278 aa15.95■□□□□ 0.14
PNKP-204ENST00000594661 SERPINB12Q96P63 405 aa15.95■□□□□ 0.14
PNKP-204ENST00000594661 NT5C1AQ9BXI3 368 aa15.95■□□□□ 0.14
PNKP-204ENST00000594661 DCLK3Q9C098 648 aa15.95■□□□□ 0.14
PNKP-204ENST00000594661 SENP6Q9GZR1 1112 aaPredicted RBP15.95■□□□□ 0.14
PNKP-204ENST00000594661 NDUFA13Q9P0J0 144 aa15.95■□□□□ 0.14
PNKP-204ENST00000594661 GOLGA8SH3BPF8 625 aa15.94■□□□□ 0.14
PNKP-204ENST00000594661 BIRC5O15392 142 aa15.94■□□□□ 0.14
PNKP-204ENST00000594661 SUPT3HO75486 399 aa15.94■□□□□ 0.14
PNKP-204ENST00000594661 ERBB2P04626 1255 aa15.94■□□□□ 0.14
PNKP-204ENST00000594661 KCNE1P15382 129 aa15.94■□□□□ 0.14
PNKP-204ENST00000594661 PAX3P23760 479 aa15.94■□□□□ 0.14
PNKP-204ENST00000594661 ACSBG2Q5FVE4 666 aa15.94■□□□□ 0.14
PNKP-204ENST00000594661 ZFYVE27Q5T4F4 411 aa15.94■□□□□ 0.14
PNKP-204ENST00000594661 SLC15A3Q8IY34 581 aa15.94■□□□□ 0.14
PNKP-204ENST00000594661 EXD1Q8NHP7 514 aa15.94■□□□□ 0.14
PNKP-204ENST00000594661 UBA3Q8TBC4 463 aa15.94■□□□□ 0.14
PNKP-204ENST00000594661 CD99L2Q8TCZ2 262 aa15.94■□□□□ 0.14
PNKP-204ENST00000594661 DIS3LQ8TF46 1054 aaKnown RBP15.94■□□□□ 0.14
PNKP-204ENST00000594661 MPP4Q96JB8 637 aa15.94■□□□□ 0.14
PNKP-204ENST00000594661 OSBPL8Q9BZF1 889 aa15.94■□□□□ 0.14
PNKP-204ENST00000594661 KLHL11Q9NVR0 708 aa15.94■□□□□ 0.14
PNKP-204ENST00000594661 TBCCD1Q9NVR7 557 aa15.94■□□□□ 0.14
PNKP-204ENST00000594661 ASIC3Q9UHC3 531 aa15.94■□□□□ 0.14
PNKP-204ENST00000594661 ST3GAL5Q9UNP4 418 aa15.94■□□□□ 0.14
PNKP-204ENST00000594661 R3HDM2Q9Y2K5 976 aaKnown RBP15.94■□□□□ 0.14
PNKP-204ENST00000594661 MEIS3P2A8K0S8 358 aa15.94■□□□□ 0.14
PNKP-204ENST00000594661 PIRO00625 290 aa15.94■□□□□ 0.14
PNKP-204ENST00000594661 SPTLC1O15269 473 aa15.94■□□□□ 0.14
PNKP-204ENST00000594661 HMGCRP04035 888 aa15.94■□□□□ 0.14
PNKP-204ENST00000594661 RARGP13631 454 aa15.94■□□□□ 0.14
PNKP-204ENST00000594661 STX2P32856 288 aa15.94■□□□□ 0.14
PNKP-204ENST00000594661 GPD2P43304 727 aa15.94■□□□□ 0.14
PNKP-204ENST00000594661 KLF1Q13351 362 aaPredicted RBP15.94■□□□□ 0.14
PNKP-204ENST00000594661 RSPH3Q86UC2 560 aa15.94■□□□□ 0.14
PNKP-204ENST00000594661 GRK7Q8WTQ7 553 aa15.94■□□□□ 0.14
PNKP-204ENST00000594661 PITPNM3Q9BZ71 974 aa15.94■□□□□ 0.14
PNKP-204ENST00000594661 FAM124BQ9H5Z6 455 aaPredicted RBP15.94■□□□□ 0.14
PNKP-204ENST00000594661 SYNCQ9H7C4 482 aa15.94■□□□□ 0.14
PNKP-204ENST00000594661 SAR1AQ9NR31 198 aa15.94■□□□□ 0.14
PNKP-204ENST00000594661 INIPQ9NRY2 104 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms