RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 F9P00740 461 aa15.79■□□□□ 0.12
VRK3-207ENST00000594092 IGLV3-25P01717 112 aa15.79■□□□□ 0.12
VRK3-207ENST00000594092 TNFRSF8P28908 595 aa15.79■□□□□ 0.12
VRK3-207ENST00000594092 ERVFC1P60507 584 aa15.79■□□□□ 0.12
VRK3-207ENST00000594092 GUCY2DQ02846 1103 aa15.79■□□□□ 0.12
VRK3-207ENST00000594092 KRT81Q14533 505 aa15.79■□□□□ 0.12
VRK3-207ENST00000594092 PDK2Q15119 407 aa15.79■□□□□ 0.12
VRK3-207ENST00000594092 CCNI2Q6ZMN8 369 aaPredicted RBP15.79■□□□□ 0.12
VRK3-207ENST00000594092 TCEAL8Q8IYN2 117 aa15.79■□□□□ 0.12
VRK3-207ENST00000594092 FAM71BQ8TC56 605 aa15.79■□□□□ 0.12
VRK3-207ENST00000594092 SPPL3Q8TCT6 385 aa15.79■□□□□ 0.12
VRK3-207ENST00000594092 MAGOHBQ96A72 148 aaKnown RBP15.79■□□□□ 0.12
VRK3-207ENST00000594092 CALN1Q9BXU9 219 aa15.79■□□□□ 0.12
VRK3-207ENST00000594092 PCDH18Q9HCL0 1135 aa15.79■□□□□ 0.12
VRK3-207ENST00000594092 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.79■□□□□ 0.12
VRK3-207ENST00000594092 MAFFQ9ULX9 164 aa15.79■□□□□ 0.12
VRK3-207ENST00000594092 R3HDM2Q9Y2K5 976 aaKnown RBP15.79■□□□□ 0.12
VRK3-207ENST00000594092 C5orf67F2Z3F1 127 aa15.78■□□□□ 0.12
VRK3-207ENST00000594092 SEC31AO94979 1220 aaKnown RBP15.78■□□□□ 0.12
VRK3-207ENST00000594092 TJP3O95049 919 aa15.78■□□□□ 0.12
VRK3-207ENST00000594092 DNAJB1P25685 340 aa15.78■□□□□ 0.12
VRK3-207ENST00000594092 L1CAMP32004 1257 aa15.78■□□□□ 0.12
VRK3-207ENST00000594092 ELF1P32519 619 aa15.78■□□□□ 0.12
VRK3-207ENST00000594092 CXCR3P49682 368 aa15.78■□□□□ 0.12
VRK3-207ENST00000594092 MMRN1Q13201 1228 aa15.78■□□□□ 0.12
VRK3-207ENST00000594092 DHX34Q14147 1143 aaKnown RBP15.78■□□□□ 0.12
VRK3-207ENST00000594092 DPYSL2Q16555 572 aa15.78■□□□□ 0.12
VRK3-207ENST00000594092 PSTKQ8IV42 348 aaKnown RBP15.78■□□□□ 0.12
VRK3-207ENST00000594092 MAP7D3Q8IWC1 876 aa15.78■□□□□ 0.12
VRK3-207ENST00000594092 C12orf50Q8NA57 414 aaPredicted RBP15.78■□□□□ 0.12
VRK3-207ENST00000594092 C1orf54Q8WWF1 131 aa15.78■□□□□ 0.12
VRK3-207ENST00000594092 TCF25Q9BQ70 676 aa15.78■□□□□ 0.12
VRK3-207ENST00000594092 MAGEB5Q9BZ81 275 aa15.78■□□□□ 0.12
VRK3-207ENST00000594092 SMOC2Q9H3U7 446 aa15.78■□□□□ 0.12
VRK3-207ENST00000594092 DHX35Q9H5Z1 703 aaKnown RBP15.78■□□□□ 0.12
VRK3-207ENST00000594092 EPB41L5Q9HCM4 733 aa15.78■□□□□ 0.12
VRK3-207ENST00000594092 GDF3Q9NR23 364 aa15.78■□□□□ 0.12
VRK3-207ENST00000594092 MTMR10Q9NXD2 777 aa15.78■□□□□ 0.12
VRK3-207ENST00000594092 MAGED2Q9UNF1 606 aaPredicted RBP15.78■□□□□ 0.12
VRK3-207ENST00000594092 PRRG1O14668 218 aa15.78■□□□□ 0.12
VRK3-207ENST00000594092 CA3P07451 260 aa15.78■□□□□ 0.12
VRK3-207ENST00000594092 IL4RP24394 825 aa15.78■□□□□ 0.12
VRK3-207ENST00000594092 ALDH1A3P47895 512 aa15.78■□□□□ 0.12
VRK3-207ENST00000594092 DR1Q01658 176 aa15.78■□□□□ 0.12
VRK3-207ENST00000594092 EIF4EBP2Q13542 120 aaPredicted RBP15.78■□□□□ 0.12
VRK3-207ENST00000594092 BEND6Q5SZJ8 279 aaPredicted RBP15.78■□□□□ 0.12
VRK3-207ENST00000594092 TTC27Q6P3X3 843 aa15.78■□□□□ 0.12
VRK3-207ENST00000594092 VSIG1Q86XK7 387 aa15.78■□□□□ 0.12
VRK3-207ENST00000594092 RNF139Q8WU17 664 aa15.78■□□□□ 0.12
VRK3-207ENST00000594092 POF1BQ8WVV4 589 aa15.78■□□□□ 0.12
VRK3-207ENST00000594092 ATG4AQ8WYN0 398 aa15.78■□□□□ 0.12
VRK3-207ENST00000594092 CASP10Q92851 521 aa15.78■□□□□ 0.12
VRK3-207ENST00000594092 NTAN1Q96AB6 310 aa15.78■□□□□ 0.12
VRK3-207ENST00000594092 KLHL5Q96PQ7 755 aa15.78■□□□□ 0.12
VRK3-207ENST00000594092 KCTD15Q96SI1 283 aaPredicted RBP15.78■□□□□ 0.12
VRK3-207ENST00000594092 HINFPQ9BQA5 517 aa15.78■□□□□ 0.12
VRK3-207ENST00000594092 DCLK3Q9C098 648 aa15.78■□□□□ 0.12
VRK3-207ENST00000594092 PLEKHA4Q9H4M7 779 aa15.78■□□□□ 0.12
VRK3-207ENST00000594092 LRRC19Q9H756 370 aa15.78■□□□□ 0.12
VRK3-207ENST00000594092 ENTPD7Q9NQZ7 604 aa15.78■□□□□ 0.12
VRK3-207ENST00000594092 TLR8Q9NR97 1041 aaKnown RBP15.78■□□□□ 0.12
VRK3-207ENST00000594092 TMPRSS4Q9NRS4 437 aa15.78■□□□□ 0.12
VRK3-207ENST00000594092 ZNF446Q9NWS9 450 aa15.78■□□□□ 0.12
VRK3-207ENST00000594092 CLIC5Q9NZA1 410 aa15.78■□□□□ 0.12
VRK3-207ENST00000594092 FBXW11Q9UKB1 542 aa15.78■□□□□ 0.12
VRK3-207ENST00000594092 NUDT5Q9UKK9 219 aa15.78■□□□□ 0.12
VRK3-207ENST00000594092 IRAK3Q9Y616 596 aa15.78■□□□□ 0.12
VRK3-207ENST00000594092 IRAK2O43187 625 aa15.77■□□□□ 0.11
VRK3-207ENST00000594092 TGM5O43548 720 aa15.77■□□□□ 0.11
VRK3-207ENST00000594092 ZDHHC11BP0C7U3 371 aa15.77■□□□□ 0.11
VRK3-207ENST00000594092 CSH1P0DML2 217 aa15.77■□□□□ 0.11
VRK3-207ENST00000594092 CSH2P0DML3 217 aa15.77■□□□□ 0.11
VRK3-207ENST00000594092 HMGA1P17096 107 aaKnown RBP15.77■□□□□ 0.11
VRK3-207ENST00000594092 GBP1P32455 592 aa15.77■□□□□ 0.11
VRK3-207ENST00000594092 ADRA1BP35368 520 aa15.77■□□□□ 0.11
VRK3-207ENST00000594092 COILP38432 576 aaPredicted RBP15.77■□□□□ 0.11
VRK3-207ENST00000594092 FNTAP49354 379 aa15.77■□□□□ 0.11
VRK3-207ENST00000594092 PSEN1P49768 467 aa15.77■□□□□ 0.11
VRK3-207ENST00000594092 UBE3AQ05086 875 aa15.77■□□□□ 0.11
VRK3-207ENST00000594092 PPP6R3Q5H9R7 873 aaPredicted RBP15.77■□□□□ 0.11
VRK3-207ENST00000594092 PLPP4Q5VZY2 271 aa15.77■□□□□ 0.11
VRK3-207ENST00000594092 MSANTD2Q6P1R3 559 aa15.77■□□□□ 0.11
VRK3-207ENST00000594092 BBS12Q6ZW61 710 aa15.77■□□□□ 0.11
VRK3-207ENST00000594092 SND1Q7KZF4 910 aaKnown RBP eCLIP15.77■□□□□ 0.11
VRK3-207ENST00000594092 RFX6Q8HWS3 928 aa15.77■□□□□ 0.11
VRK3-207ENST00000594092 PYROXD2Q8N2H3 581 aa15.77■□□□□ 0.11
VRK3-207ENST00000594092 ANLNQ9NQW6 1124 aa15.77■□□□□ 0.11
VRK3-207ENST00000594092 HOMER3Q9NSC5 361 aa15.77■□□□□ 0.11
VRK3-207ENST00000594092 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.77■□□□□ 0.11
VRK3-207ENST00000594092 PCYOX1Q9UHG3 505 aa15.77■□□□□ 0.11
VRK3-207ENST00000594092 SFMBT1Q9UHJ3 866 aa15.77■□□□□ 0.11
VRK3-207ENST00000594092 RASAL2Q9UJF2 1139 aa15.77■□□□□ 0.11
VRK3-207ENST00000594092 UTP11Q9Y3A2 253 aaKnown RBP15.77■□□□□ 0.11
VRK3-207ENST00000594092 INSL5Q9Y5Q6 135 aa15.77■□□□□ 0.11
VRK3-207ENST00000594092 FAM187AA6NFU0 413 aa15.76■□□□□ 0.11
VRK3-207ENST00000594092 C2orf71A6NGG8 1288 aa15.76■□□□□ 0.11
VRK3-207ENST00000594092 HIDE1A8MVS5 230 aa15.76■□□□□ 0.11
VRK3-207ENST00000594092 ZNF487B1APH4 448 aa15.76■□□□□ 0.11
VRK3-207ENST00000594092 I6L893 689 aaPredicted RBP15.76■□□□□ 0.11
VRK3-207ENST00000594092 TTI1O43156 1089 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms