RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 DCLK3Q9C098 648 aa15.21■□□□□ 0.03
VRK3-206ENST00000594090 TSPY26PQ9H489 355 aa15.21■□□□□ 0.03
VRK3-206ENST00000594090 FBRSL1Q9HCM7 1045 aaKnown RBP15.21■□□□□ 0.03
VRK3-206ENST00000594090 ZNF510Q9Y2H8 683 aa15.21■□□□□ 0.03
VRK3-206ENST00000594090 F5P12259 2224 aa15.2■□□□□ 0.02
VRK3-206ENST00000594090 HOXC11O43248 304 aaPredicted RBP15.2■□□□□ 0.02
VRK3-206ENST00000594090 DRD1P21728 446 aa15.2■□□□□ 0.02
VRK3-206ENST00000594090 GALK1P51570 392 aa15.2■□□□□ 0.02
VRK3-206ENST00000594090 SNX16P57768 344 aa15.2■□□□□ 0.02
VRK3-206ENST00000594090 NOMO3P69849 1222 aa15.2■□□□□ 0.02
VRK3-206ENST00000594090 CDR2Q01850 454 aa15.2■□□□□ 0.02
VRK3-206ENST00000594090 GAD2Q05329 585 aa15.2■□□□□ 0.02
VRK3-206ENST00000594090 ANGPT1Q15389 498 aa15.2■□□□□ 0.02
VRK3-206ENST00000594090 TRIP4Q15650 581 aaPredicted RBP15.2■□□□□ 0.02
VRK3-206ENST00000594090 DGKKQ5KSL6 1271 aa15.2■□□□□ 0.02
VRK3-206ENST00000594090 Q6ZS52 159 aa15.2■□□□□ 0.02
VRK3-206ENST00000594090 C12orf40Q86WS4 652 aa15.2■□□□□ 0.02
VRK3-206ENST00000594090 TMEM25Q86YD3 366 aa15.2■□□□□ 0.02
VRK3-206ENST00000594090 C1orf210Q8IVY1 113 aa15.2■□□□□ 0.02
VRK3-206ENST00000594090 DQX1Q8TE96 717 aaKnown RBP15.2■□□□□ 0.02
VRK3-206ENST00000594090 SYNCQ9H7C4 482 aa15.2■□□□□ 0.02
VRK3-206ENST00000594090 POPDC2Q9HBU9 364 aa15.2■□□□□ 0.02
VRK3-206ENST00000594090 SPATA6Q9NWH7 488 aaPredicted RBP15.2■□□□□ 0.02
VRK3-206ENST00000594090 NAALADL1Q9UQQ1 740 aa15.2■□□□□ 0.02
VRK3-206ENST00000594090 CAPN9O14815 690 aa15.19■□□□□ 0.02
VRK3-206ENST00000594090 EGFP01133 1207 aa15.19■□□□□ 0.02
VRK3-206ENST00000594090 IGLV3-27P01718 113 aa15.19■□□□□ 0.02
VRK3-206ENST00000594090 GLI1P08151 1106 aa15.19■□□□□ 0.02
VRK3-206ENST00000594090 CHRNB2P17787 502 aa15.19■□□□□ 0.02
VRK3-206ENST00000594090 EIF2DP41214 584 aaKnown RBP15.19■□□□□ 0.02
VRK3-206ENST00000594090 FMO1Q01740 532 aa15.19■□□□□ 0.02
VRK3-206ENST00000594090 MTAPQ13126 283 aa15.19■□□□□ 0.02
VRK3-206ENST00000594090 GAS6Q14393 721 aa15.19■□□□□ 0.02
VRK3-206ENST00000594090 ANO4Q32M45 955 aa15.19■□□□□ 0.02
VRK3-206ENST00000594090 NAA35Q5VZE5 725 aa15.19■□□□□ 0.02
VRK3-206ENST00000594090 OR6B2Q6IFH4 312 aa15.19■□□□□ 0.02
VRK3-206ENST00000594090 OLFML1Q6UWY5 402 aa15.19■□□□□ 0.02
VRK3-206ENST00000594090 TOGARAM2Q6ZUX3 1019 aa15.19■□□□□ 0.02
VRK3-206ENST00000594090 DENND1CQ8IV53 801 aa15.19■□□□□ 0.02
VRK3-206ENST00000594090 BAP1Q92560 729 aa15.19■□□□□ 0.02
VRK3-206ENST00000594090 ASNSD1Q9NWL6 643 aa15.19■□□□□ 0.02
VRK3-206ENST00000594090 AGO1Q9UL18 857 aaKnown RBP15.19■□□□□ 0.02
VRK3-206ENST00000594090 MYO6Q9UM54 1294 aa15.19■□□□□ 0.02
VRK3-206ENST00000594090 MYOFQ9NZM1 2061 aa15.18■□□□□ 0.02
VRK3-206ENST00000594090 FAM170AA1A519 330 aa15.18■□□□□ 0.02
VRK3-206ENST00000594090 H0Y858 1186 aa15.18■□□□□ 0.02
VRK3-206ENST00000594090 HSF2BPO75031 334 aa15.18■□□□□ 0.02
VRK3-206ENST00000594090 GABRB2P47870 512 aa15.18■□□□□ 0.02
VRK3-206ENST00000594090 SLC6A11P48066 632 aa15.18■□□□□ 0.02
VRK3-206ENST00000594090 HARS2P49590 506 aaKnown RBP15.18■□□□□ 0.02
VRK3-206ENST00000594090 UBASH3AP57075 661 aa15.18■□□□□ 0.02
VRK3-206ENST00000594090 YWHAZP63104 245 aaKnown RBP15.18■□□□□ 0.02
VRK3-206ENST00000594090 ARID5AQ03989 594 aa15.18■□□□□ 0.02
VRK3-206ENST00000594090 RING1Q06587 406 aa15.18■□□□□ 0.02
VRK3-206ENST00000594090 NNTQ13423 1086 aa15.18■□□□□ 0.02
VRK3-206ENST00000594090 TAF5Q15542 800 aa15.18■□□□□ 0.02
VRK3-206ENST00000594090 EFHC1Q5JVL4 640 aa15.18■□□□□ 0.02
VRK3-206ENST00000594090 SYPL2Q5VXT5 272 aa15.18■□□□□ 0.02
VRK3-206ENST00000594090 TRIM72Q6ZMU5 477 aa15.18■□□□□ 0.02
VRK3-206ENST00000594090 TPGS1Q6ZTW0 290 aa15.18■□□□□ 0.02
VRK3-206ENST00000594090 SLC26A9Q7LBE3 791 aa15.18■□□□□ 0.02
VRK3-206ENST00000594090 TAC4Q86UU9 113 aa15.18■□□□□ 0.02
VRK3-206ENST00000594090 ZDHHC17Q8IUH5 632 aa15.18■□□□□ 0.02
VRK3-206ENST00000594090 ETFBKMTQ8IXQ9 262 aa15.18■□□□□ 0.02
VRK3-206ENST00000594090 SYNPOQ8N3V7 929 aa15.18■□□□□ 0.02
VRK3-206ENST00000594090 MSANTD4Q8NCY6 345 aa15.18■□□□□ 0.02
VRK3-206ENST00000594090 EZH1Q92800 747 aaPredicted RBP15.18■□□□□ 0.02
VRK3-206ENST00000594090 SERPINB11Q96P15 392 aa15.18■□□□□ 0.02
VRK3-206ENST00000594090 TTYH3Q9C0H2 523 aa15.18■□□□□ 0.02
VRK3-206ENST00000594090 MARK1Q9P0L2 795 aa15.18■□□□□ 0.02
VRK3-206ENST00000594090 NEDD8-MDP1E9PL57 170 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 LAMTOR5O43504 91 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 GRAP2O75791 330 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 LATS1O95835 1130 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 IGLV3-25P01717 112 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 CYP1A1P04798 512 aaPredicted RBP15.17■□□□□ 0.02
VRK3-206ENST00000594090 FERP16591 822 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 CHKAP35790 457 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 PBX1P40424 430 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 TBX4P57082 545 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 SLC6A3Q01959 620 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 ERICH1Q86X53 443 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 XYLT1Q86Y38 959 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 FAM217AQ8IXS0 508 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 MAML2Q8IZL2 1156 aaPredicted RBP15.17■□□□□ 0.02
VRK3-206ENST00000594090 CPXM2Q8N436 756 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 NAT16Q8N8M0 369 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 ADAM32Q8TC27 787 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 CPA5Q8WXQ8 436 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 C18orf8Q96DM3 657 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 SLC2A13Q96QE2 648 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 PNKPQ96T60 521 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 BBS2Q9BXC9 721 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 PRMT8Q9NR22 394 aaPredicted RBP15.17■□□□□ 0.02
VRK3-206ENST00000594090 WDR35Q9P2L0 1181 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 LRRC53A6NM62 1247 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.17■□□□□ 0.02
VRK3-206ENST00000594090 IRAK2O43187 625 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 CACNG3O60359 315 aa15.17■□□□□ 0.02
VRK3-206ENST00000594090 RNF40O75150 1001 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms