RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 CACNA2D2Q9NY47 1150 aa23.82■■□□□ 1.4
SSBP4-203ENST00000593641 PLK2Q9NYY3 685 aa23.82■■□□□ 1.4
SSBP4-203ENST00000593641 CLIC5Q9NZA1 410 aa23.82■■□□□ 1.4
SSBP4-203ENST00000593641 RASAL2Q9UJF2 1139 aa23.82■■□□□ 1.4
SSBP4-203ENST00000593641 MAPK8IP1Q9UQF2 711 aa23.82■■□□□ 1.4
SSBP4-203ENST00000593641 RAD54BQ9Y620 910 aa23.82■■□□□ 1.4
SSBP4-203ENST00000593641 GFRA2O00451 464 aa23.81■■□□□ 1.4
SSBP4-203ENST00000593641 NDUFS2O75306 463 aa23.81■■□□□ 1.4
SSBP4-203ENST00000593641 STC2O76061 302 aa23.81■■□□□ 1.4
SSBP4-203ENST00000593641 SPINK2P20155 84 aa23.81■■□□□ 1.4
SSBP4-203ENST00000593641 STARD3Q14849 445 aa23.81■■□□□ 1.4
SSBP4-203ENST00000593641 ZNF394Q53GI3 561 aa23.81■■□□□ 1.4
SSBP4-203ENST00000593641 ZNF276Q8N554 614 aa23.81■■□□□ 1.4
SSBP4-203ENST00000593641 TTC39CQ8N584 583 aa23.81■■□□□ 1.4
SSBP4-203ENST00000593641 HSPA12BQ96MM6 686 aa23.81■■□□□ 1.4
SSBP4-203ENST00000593641 CD248Q9HCU0 757 aa23.81■■□□□ 1.4
SSBP4-203ENST00000593641 FSCN3Q9NQT6 498 aa23.81■■□□□ 1.4
SSBP4-203ENST00000593641 WASF3Q9UPY6 502 aa23.81■■□□□ 1.4
SSBP4-203ENST00000593641 OPHN1O60890 802 aa23.8■■□□□ 1.4
SSBP4-203ENST00000593641 CISD3P0C7P0 127 aa23.8■■□□□ 1.4
SSBP4-203ENST00000593641 GTF2H1P32780 548 aa23.8■■□□□ 1.4
SSBP4-203ENST00000593641 CHKAP35790 457 aa23.8■■□□□ 1.4
SSBP4-203ENST00000593641 NDUFA8P51970 172 aa23.8■■□□□ 1.4
SSBP4-203ENST00000593641 COG7P83436 770 aa23.8■■□□□ 1.4
SSBP4-203ENST00000593641 ADAM9Q13443 819 aa23.8■■□□□ 1.4
SSBP4-203ENST00000593641 KRT39Q6A163 491 aa23.8■■□□□ 1.4
SSBP4-203ENST00000593641 KIAA1324Q6UXG2 1013 aaKnown RBP23.8■■□□□ 1.4
SSBP4-203ENST00000593641 SCD5Q86SK9 330 aa23.8■■□□□ 1.4
SSBP4-203ENST00000593641 GUF1Q8N442 669 aaKnown RBP23.8■■□□□ 1.4
SSBP4-203ENST00000593641 TRIML1Q8N9V2 468 aa23.8■■□□□ 1.4
SSBP4-203ENST00000593641 HEXIM2Q96MH2 286 aaKnown RBP23.8■■□□□ 1.4
SSBP4-203ENST00000593641 SCNM1Q9BWG6 230 aa23.8■■□□□ 1.4
SSBP4-203ENST00000593641 DCLK3Q9C098 648 aa23.8■■□□□ 1.4
SSBP4-203ENST00000593641 CAPN10Q9HC96 672 aa23.8■■□□□ 1.4
SSBP4-203ENST00000593641 USP3Q9Y6I4 520 aa23.8■■□□□ 1.4
SSBP4-203ENST00000593641 A0A1W2PQD8 194 aa23.79■■□□□ 1.4
SSBP4-203ENST00000593641 SYPP08247 313 aa23.79■■□□□ 1.4
SSBP4-203ENST00000593641 DPYDQ12882 1025 aa23.79■■□□□ 1.4
SSBP4-203ENST00000593641 SEMA3BQ13214 749 aa23.79■■□□□ 1.4
SSBP4-203ENST00000593641 SYCP2LQ5T4T6 812 aa23.79■■□□□ 1.4
SSBP4-203ENST00000593641 SLC41A1Q8IVJ1 513 aa23.79■■□□□ 1.4
SSBP4-203ENST00000593641 RGL4Q8IZJ4 473 aa23.79■■□□□ 1.4
SSBP4-203ENST00000593641 ARHGAP18Q8N392 663 aa23.79■■□□□ 1.4
SSBP4-203ENST00000593641 FAXDC2Q96IV6 333 aa23.79■■□□□ 1.4
SSBP4-203ENST00000593641 MRGPRX1Q96LB2 322 aa23.79■■□□□ 1.4
SSBP4-203ENST00000593641 UPK3BL1B0FP48 263 aa23.78■■□□□ 1.4
SSBP4-203ENST00000593641 UPK3BL2E5RIL1 263 aa23.78■■□□□ 1.4
SSBP4-203ENST00000593641 TOP3BO95985 862 aaKnown RBP23.78■■□□□ 1.4
SSBP4-203ENST00000593641 HMBSP08397 361 aa23.78■■□□□ 1.4
SSBP4-203ENST00000593641 CORO1AP31146 461 aaKnown RBP23.78■■□□□ 1.4
SSBP4-203ENST00000593641 MXI1P50539 228 aa23.78■■□□□ 1.4
SSBP4-203ENST00000593641 SLC8A3P57103 927 aa23.78■■□□□ 1.4
SSBP4-203ENST00000593641 EFEMP1Q12805 493 aa23.78■■□□□ 1.4
SSBP4-203ENST00000593641 RSRC2Q7L4I2 434 aaKnown RBP23.78■■□□□ 1.4
SSBP4-203ENST00000593641 PIP4P1Q86T03 277 aa23.78■■□□□ 1.4
SSBP4-203ENST00000593641 MINDY1Q8N5J2 469 aa23.78■■□□□ 1.4
SSBP4-203ENST00000593641 UCMAQ8WVF2 138 aa23.78■■□□□ 1.4
SSBP4-203ENST00000593641 FOXJ1Q92949 421 aa23.78■■□□□ 1.4
SSBP4-203ENST00000593641 SLC6A17Q9H1V8 727 aa23.78■■□□□ 1.4
SSBP4-203ENST00000593641 FAM124BQ9H5Z6 455 aaPredicted RBP23.78■■□□□ 1.4
SSBP4-203ENST00000593641 SUSD2Q9UGT4 822 aa23.78■■□□□ 1.4
SSBP4-203ENST00000593641 FBXO10Q9UK96 956 aa23.78■■□□□ 1.4
SSBP4-203ENST00000593641 ZMIZ1Q9ULJ6 1067 aa23.78■■□□□ 1.4
SSBP4-203ENST00000593641 STRIP2Q9ULQ0 834 aa23.78■■□□□ 1.4
SSBP4-203ENST00000593641 SLC27A6Q9Y2P4 619 aa23.78■■□□□ 1.4
SSBP4-203ENST00000593641 STON1Q9Y6Q2 735 aa23.78■■□□□ 1.4
SSBP4-203ENST00000593641 FAM237AA0A1B0GTK4 181 aa23.77■■□□□ 1.4
SSBP4-203ENST00000593641 TMEM8BA6NDV4 472 aa23.77■■□□□ 1.4
SSBP4-203ENST00000593641 WASH3PC4AMC7 463 aa23.77■■□□□ 1.4
SSBP4-203ENST00000593641 ARHGAP33O14559 1287 aa23.77■■□□□ 1.4
SSBP4-203ENST00000593641 NPC1O15118 1278 aa23.77■■□□□ 1.4
SSBP4-203ENST00000593641 PENKP01210 267 aaPredicted RBP23.77■■□□□ 1.4
SSBP4-203ENST00000593641 CYBBP04839 570 aa23.77■■□□□ 1.4
SSBP4-203ENST00000593641 SIM1P81133 766 aaPredicted RBP23.77■■□□□ 1.4
SSBP4-203ENST00000593641 FBXL13Q8NEE6 735 aa23.77■■□□□ 1.4
SSBP4-203ENST00000593641 CISHQ9NSE2 258 aa23.77■■□□□ 1.4
SSBP4-203ENST00000593641 CKAP5Q14008 2032 aa23.77■■□□□ 1.4
SSBP4-203ENST00000593641 CACNA1GO43497 2377 aa23.77■■□□□ 1.4
SSBP4-203ENST00000593641 SPAARA0A1B0GVQ0 90 aa23.76■■□□□ 1.39
SSBP4-203ENST00000593641 STX10O60499 249 aa23.76■■□□□ 1.39
SSBP4-203ENST00000593641 KLKB1P03952 638 aa23.76■■□□□ 1.39
SSBP4-203ENST00000593641 GNSP15586 552 aa23.76■■□□□ 1.39
SSBP4-203ENST00000593641 RDXP35241 583 aaKnown RBP23.76■■□□□ 1.39
SSBP4-203ENST00000593641 ZNF132P52740 706 aa23.76■■□□□ 1.39
SSBP4-203ENST00000593641 MFAP3P55082 362 aa23.76■■□□□ 1.39
SSBP4-203ENST00000593641 E2F5Q15329 346 aa23.76■■□□□ 1.39
SSBP4-203ENST00000593641 PLEKHG6Q3KR16 790 aa23.76■■□□□ 1.39
SSBP4-203ENST00000593641 WDR45BQ5MNZ6 344 aa23.76■■□□□ 1.39
SSBP4-203ENST00000593641 FYB2Q5VWT5 728 aa23.76■■□□□ 1.39
SSBP4-203ENST00000593641 KRBA2Q6ZNG9 492 aa23.76■■□□□ 1.39
SSBP4-203ENST00000593641 KDF1Q8NAX2 398 aaPredicted RBP23.76■■□□□ 1.39
SSBP4-203ENST00000593641 CCDC34Q96HJ3 373 aa23.76■■□□□ 1.39
SSBP4-203ENST00000593641 TMEM176AQ96HP8 235 aa23.76■■□□□ 1.39
SSBP4-203ENST00000593641 ZNF419Q96HQ0 510 aaPredicted RBP23.76■■□□□ 1.39
SSBP4-203ENST00000593641 CD93Q9NPY3 652 aa23.76■■□□□ 1.39
SSBP4-203ENST00000593641 MARCH2Q9P0N8 246 aa23.76■■□□□ 1.39
SSBP4-203ENST00000593641 EPB41P11171 864 aaKnown RBP23.75■■□□□ 1.39
SSBP4-203ENST00000593641 CD6P30203 668 aa23.75■■□□□ 1.39
SSBP4-203ENST00000593641 GEN1Q17RS7 908 aa23.75■■□□□ 1.39
SSBP4-203ENST00000593641 EDRF1Q3B7T1 1238 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms