RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 EDRF1Q3B7T1 1238 aa25.14■■□□□ 1.62
LSM4-202ENST00000593564 ZNF394Q53GI3 561 aa25.14■■□□□ 1.62
LSM4-202ENST00000593564 DEFB124Q8NES8 71 aa25.14■■□□□ 1.62
LSM4-202ENST00000593564 SEMA4DQ92854 862 aa25.14■■□□□ 1.62
LSM4-202ENST00000593564 BHMTQ93088 406 aa25.14■■□□□ 1.62
LSM4-202ENST00000593564 HEXIM2Q96MH2 286 aaKnown RBP25.14■■□□□ 1.62
LSM4-202ENST00000593564 SLC6A14Q9UN76 642 aa25.14■■□□□ 1.62
LSM4-202ENST00000593564 CHD6Q8TD26 2715 aa25.14■■□□□ 1.61
LSM4-202ENST00000593564 KLKB1P03952 638 aa25.13■■□□□ 1.61
LSM4-202ENST00000593564 CFIP05156 583 aa25.13■■□□□ 1.61
LSM4-202ENST00000593564 PROS1P07225 676 aa25.13■■□□□ 1.61
LSM4-202ENST00000593564 COG7P83436 770 aa25.13■■□□□ 1.61
LSM4-202ENST00000593564 DEFB119Q8N690 84 aa25.13■■□□□ 1.61
LSM4-202ENST00000593564 P2RY11Q96G91 374 aa25.13■■□□□ 1.61
LSM4-202ENST00000593564 UBXN6Q9BZV1 441 aa25.13■■□□□ 1.61
LSM4-202ENST00000593564 SCAND2PQ9GZW5 306 aaPredicted RBP25.13■■□□□ 1.61
LSM4-202ENST00000593564 FAM124BQ9H5Z6 455 aaPredicted RBP25.13■■□□□ 1.61
LSM4-202ENST00000593564 CACNA2D2Q9NY47 1150 aa25.13■■□□□ 1.61
LSM4-202ENST00000593564 PLK2Q9NYY3 685 aa25.13■■□□□ 1.61
LSM4-202ENST00000593564 RASAL2Q9UJF2 1139 aa25.13■■□□□ 1.61
LSM4-202ENST00000593564 SLC27A6Q9Y2P4 619 aa25.13■■□□□ 1.61
LSM4-202ENST00000593564 RAD54BQ9Y620 910 aa25.13■■□□□ 1.61
LSM4-202ENST00000593564 PENKP01210 267 aaPredicted RBP25.12■■□□□ 1.61
LSM4-202ENST00000593564 SERPINF2P08697 491 aa25.12■■□□□ 1.61
LSM4-202ENST00000593564 MXI1P50539 228 aa25.12■■□□□ 1.61
LSM4-202ENST00000593564 ARHGAP18Q8N392 663 aa25.12■■□□□ 1.61
LSM4-202ENST00000593564 SLC4A11Q8NBS3 891 aa25.12■■□□□ 1.61
LSM4-202ENST00000593564 FBXL13Q8NEE6 735 aa25.12■■□□□ 1.61
LSM4-202ENST00000593564 DCLK3Q9C098 648 aa25.12■■□□□ 1.61
LSM4-202ENST00000593564 GOLPH3LQ9H4A5 285 aa25.12■■□□□ 1.61
LSM4-202ENST00000593564 SLC32A1Q9H598 525 aa25.12■■□□□ 1.61
LSM4-202ENST00000593564 CAPN10Q9HC96 672 aa25.12■■□□□ 1.61
LSM4-202ENST00000593564 CISHQ9NSE2 258 aa25.12■■□□□ 1.61
LSM4-202ENST00000593564 CYP8B1Q9UNU6 501 aa25.12■■□□□ 1.61
LSM4-202ENST00000593564 UPK3BL1B0FP48 263 aa25.11■■□□□ 1.61
LSM4-202ENST00000593564 UPK3BL2E5RIL1 263 aa25.11■■□□□ 1.61
LSM4-202ENST00000593564 CHKAP35790 457 aa25.11■■□□□ 1.61
LSM4-202ENST00000593564 GFPT1Q06210 699 aaPredicted RBP25.11■■□□□ 1.61
LSM4-202ENST00000593564 FYB2Q5VWT5 728 aa25.11■■□□□ 1.61
LSM4-202ENST00000593564 SLC41A1Q8IVJ1 513 aa25.11■■□□□ 1.61
LSM4-202ENST00000593564 TMEM176AQ96HP8 235 aa25.11■■□□□ 1.61
LSM4-202ENST00000593564 MRGPRX1Q96LB2 322 aa25.11■■□□□ 1.61
LSM4-202ENST00000593564 RAB20Q9NX57 234 aa25.11■■□□□ 1.61
LSM4-202ENST00000593564 CACNA1EQ15878 2313 aa25.11■■□□□ 1.61
LSM4-202ENST00000593564 STX10O60499 249 aa25.1■■□□□ 1.61
LSM4-202ENST00000593564 ZNF202O95125 648 aa25.1■■□□□ 1.61
LSM4-202ENST00000593564 CORO1AP31146 461 aaKnown RBP25.1■■□□□ 1.61
LSM4-202ENST00000593564 ATXN3P54252 364 aaPredicted RBP25.1■■□□□ 1.61
LSM4-202ENST00000593564 RAD23BP54727 409 aa25.1■■□□□ 1.61
LSM4-202ENST00000593564 EFEMP1Q12805 493 aa25.1■■□□□ 1.61
LSM4-202ENST00000593564 SEMA3BQ13214 749 aa25.1■■□□□ 1.61
LSM4-202ENST00000593564 RAB41Q5JT25 222 aa25.1■■□□□ 1.61
LSM4-202ENST00000593564 ARHGAP17Q68EM7 881 aa25.1■■□□□ 1.61
LSM4-202ENST00000593564 UNQ6494/PRO21346Q6UXR6 183 aa25.1■■□□□ 1.61
LSM4-202ENST00000593564 PIP4P1Q86T03 277 aa25.1■■□□□ 1.61
LSM4-202ENST00000593564 PIGZQ86VD9 579 aa25.1■■□□□ 1.61
LSM4-202ENST00000593564 ERLEC1Q96DZ1 483 aa25.1■■□□□ 1.61
LSM4-202ENST00000593564 HSPA12BQ96MM6 686 aa25.1■■□□□ 1.61
LSM4-202ENST00000593564 FSCN3Q9NQT6 498 aa25.1■■□□□ 1.61
LSM4-202ENST00000593564 ATP6V1DQ9Y5K8 247 aa25.1■■□□□ 1.61
LSM4-202ENST00000593564 WASH3PC4AMC7 463 aa25.09■■□□□ 1.61
LSM4-202ENST00000593564 NPC1O15118 1278 aa25.09■■□□□ 1.61
LSM4-202ENST00000593564 EPB41P11171 864 aaKnown RBP25.09■■□□□ 1.61
LSM4-202ENST00000593564 MFAP3P55082 362 aa25.09■■□□□ 1.61
LSM4-202ENST00000593564 TRIML1Q8N9V2 468 aa25.09■■□□□ 1.61
LSM4-202ENST00000593564 ANKRD52Q8NB46 1076 aa25.09■■□□□ 1.61
LSM4-202ENST00000593564 EEF2KMTQ96G04 330 aa25.09■■□□□ 1.61
LSM4-202ENST00000593564 ZNF419Q96HQ0 510 aaPredicted RBP25.09■■□□□ 1.61
LSM4-202ENST00000593564 ARID3AQ99856 593 aa25.09■■□□□ 1.61
LSM4-202ENST00000593564 GTPBP2Q9BX10 602 aaKnown RBP25.09■■□□□ 1.61
LSM4-202ENST00000593564 SLC6A17Q9H1V8 727 aa25.09■■□□□ 1.61
LSM4-202ENST00000593564 MARCH2Q9P0N8 246 aa25.09■■□□□ 1.61
LSM4-202ENST00000593564 AGO1Q9UL18 857 aaKnown RBP25.09■■□□□ 1.61
LSM4-202ENST00000593564 STRIP2Q9ULQ0 834 aa25.09■■□□□ 1.61
LSM4-202ENST00000593564 STON1Q9Y6Q2 735 aa25.09■■□□□ 1.61
LSM4-202ENST00000593564 PCNX2A6NKB5 2137 aa25.08■■□□□ 1.61
LSM4-202ENST00000593564 C1QTNF9BB2RNN3 333 aa25.08■■□□□ 1.61
LSM4-202ENST00000593564 CETN3O15182 167 aa25.08■■□□□ 1.61
LSM4-202ENST00000593564 HMBSP08397 361 aa25.08■■□□□ 1.61
LSM4-202ENST00000593564 C1QTNF9P0C862 333 aa25.08■■□□□ 1.61
LSM4-202ENST00000593564 ZNF132P52740 706 aa25.08■■□□□ 1.61
LSM4-202ENST00000593564 SLC8A3P57103 927 aa25.08■■□□□ 1.61
LSM4-202ENST00000593564 STARD3Q14849 445 aa25.08■■□□□ 1.61
LSM4-202ENST00000593564 METTL3Q86U44 580 aaKnown RBP25.08■■□□□ 1.61
LSM4-202ENST00000593564 SMYD4Q8IYR2 804 aaPredicted RBP25.08■■□□□ 1.61
LSM4-202ENST00000593564 HDDC3Q8N4P3 179 aa25.08■■□□□ 1.61
LSM4-202ENST00000593564 CCDC34Q96HJ3 373 aa25.08■■□□□ 1.61
LSM4-202ENST00000593564 ADAM33Q9BZ11 813 aa25.08■■□□□ 1.61
LSM4-202ENST00000593564 CD93Q9NPY3 652 aa25.08■■□□□ 1.61
LSM4-202ENST00000593564 THAP10Q9P2Z0 257 aaPredicted RBP25.08■■□□□ 1.61
LSM4-202ENST00000593564 IGF2RP11717 2491 aa25.08■■□□□ 1.61
LSM4-202ENST00000593564 NDUFS2O75306 463 aa25.07■■□□□ 1.6
LSM4-202ENST00000593564 TOP3BO95985 862 aaKnown RBP25.07■■□□□ 1.6
LSM4-202ENST00000593564 SPINK2P20155 84 aa25.07■■□□□ 1.6
LSM4-202ENST00000593564 YWHAGP61981 247 aaKnown RBP eCLIP25.07■■□□□ 1.6
LSM4-202ENST00000593564 ENPP2Q13822 863 aa25.07■■□□□ 1.6
LSM4-202ENST00000593564 GEN1Q17RS7 908 aa25.07■■□□□ 1.6
LSM4-202ENST00000593564 KIAA1324Q6UXG2 1013 aaKnown RBP25.07■■□□□ 1.6
LSM4-202ENST00000593564 RSRC2Q7L4I2 434 aaKnown RBP25.07■■□□□ 1.6
LSM4-202ENST00000593564 CPXM2Q8N436 756 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms