RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 DUS2Q9NX74 493 aaKnown RBP10.38□□□□□ -0.75
TPM4-216ENST00000592822 WDR35Q9P2L0 1181 aa10.38□□□□□ -0.75
TPM4-216ENST00000592822 TMEM59LQ9UK28 342 aa10.38□□□□□ -0.75
TPM4-216ENST00000592822 STRIP2Q9ULQ0 834 aa10.38□□□□□ -0.75
TPM4-216ENST00000592822 NENFQ9UMX5 172 aa10.38□□□□□ -0.75
TPM4-216ENST00000592822 HBS1LQ9Y450 684 aaKnown RBP10.38□□□□□ -0.75
TPM4-216ENST00000592822 TECTAO75443 2155 aa10.38□□□□□ -0.75
TPM4-216ENST00000592822 COL4A3Q01955 1670 aa10.38□□□□□ -0.75
TPM4-216ENST00000592822 OTOL1A6NHN0 477 aaPredicted RBP10.37□□□□□ -0.75
TPM4-216ENST00000592822 CAPN9O14815 690 aa10.37□□□□□ -0.75
TPM4-216ENST00000592822 GJB6O95452 261 aa10.37□□□□□ -0.75
TPM4-216ENST00000592822 TRUB2O95900 331 aaKnown RBP10.37□□□□□ -0.75
TPM4-216ENST00000592822 IGLV3-27P01718 113 aa10.37□□□□□ -0.75
TPM4-216ENST00000592822 CALB1P05937 261 aa10.37□□□□□ -0.75
TPM4-216ENST00000592822 ALADP13716 330 aa10.37□□□□□ -0.75
TPM4-216ENST00000592822 RRM1P23921 792 aa10.37□□□□□ -0.75
TPM4-216ENST00000592822 NOS2P35228 1153 aa10.37□□□□□ -0.75
TPM4-216ENST00000592822 FLT3P36888 993 aa10.37□□□□□ -0.75
TPM4-216ENST00000592822 MATKP42679 507 aa10.37□□□□□ -0.75
TPM4-216ENST00000592822 IFNAR2P48551 515 aa10.37□□□□□ -0.75
TPM4-216ENST00000592822 RNASE9P60153 205 aaKnown RBP10.37□□□□□ -0.75
TPM4-216ENST00000592822 CDK17Q00537 523 aa10.37□□□□□ -0.75
TPM4-216ENST00000592822 EIF4EBP2Q13542 120 aaPredicted RBP10.37□□□□□ -0.75
TPM4-216ENST00000592822 PDGFRLQ15198 375 aa10.37□□□□□ -0.75
TPM4-216ENST00000592822 TRIP4Q15650 581 aaPredicted RBP10.37□□□□□ -0.75
TPM4-216ENST00000592822 TSR1Q2NL82 804 aaKnown RBP10.37□□□□□ -0.75
TPM4-216ENST00000592822 ASTE1Q2TB18 679 aaPredicted RBP10.37□□□□□ -0.75
TPM4-216ENST00000592822 EML3Q32P44 896 aa10.37□□□□□ -0.75
TPM4-216ENST00000592822 OTUD1Q5VV17 481 aaPredicted RBP10.37□□□□□ -0.75
TPM4-216ENST00000592822 PPP1R2P3Q6NXS1 205 aa10.37□□□□□ -0.75
TPM4-216ENST00000592822 Q6ZNB5 142 aa10.37□□□□□ -0.75
TPM4-216ENST00000592822 ARCQ7LC44 396 aa10.37□□□□□ -0.75
TPM4-216ENST00000592822 VPS36Q86VN1 386 aa10.37□□□□□ -0.75
TPM4-216ENST00000592822 BBS7Q8IWZ6 715 aa10.37□□□□□ -0.75
TPM4-216ENST00000592822 C3orf20Q8ND61 904 aa10.37□□□□□ -0.75
TPM4-216ENST00000592822 JOSD2Q8TAC2 188 aa10.37□□□□□ -0.75
TPM4-216ENST00000592822 OSCP1Q8WVF1 389 aa10.37□□□□□ -0.75
TPM4-216ENST00000592822 DNASE1L2Q92874 299 aa10.37□□□□□ -0.75
TPM4-216ENST00000592822 IRF7Q92985 503 aa10.37□□□□□ -0.75
TPM4-216ENST00000592822 NT5C3BQ969T7 300 aa10.37□□□□□ -0.75
TPM4-216ENST00000592822 PLD4Q96BZ4 506 aa10.37□□□□□ -0.75
TPM4-216ENST00000592822 NPY6RQ99463 290 aa10.37□□□□□ -0.75
TPM4-216ENST00000592822 ADAM33Q9BZ11 813 aa10.37□□□□□ -0.75
TPM4-216ENST00000592822 EBF3Q9H4W6 596 aa10.37□□□□□ -0.75
TPM4-216ENST00000592822 EPHX3Q9H6B9 360 aa10.37□□□□□ -0.75
TPM4-216ENST00000592822 GRPEL1Q9HAV7 217 aa10.37□□□□□ -0.75
TPM4-216ENST00000592822 HPS4Q9NQG7 708 aa10.37□□□□□ -0.75
TPM4-216ENST00000592822 METTL5Q9NRN9 209 aaKnown RBP10.37□□□□□ -0.75
TPM4-216ENST00000592822 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.37□□□□□ -0.75
TPM4-216ENST00000592822 GTSE1Q9NYZ3 720 aa10.37□□□□□ -0.75
TPM4-216ENST00000592822 WNT16Q9UBV4 365 aa10.37□□□□□ -0.75
TPM4-216ENST00000592822 SH3BP1Q9Y3L3 701 aa10.37□□□□□ -0.75
TPM4-216ENST00000592822 MYOFQ9NZM1 2061 aa10.37□□□□□ -0.75
TPM4-216ENST00000592822 SSU72P8A0A1W2PR75 194 aa10.36□□□□□ -0.75
TPM4-216ENST00000592822 KRBA1A5PL33 1030 aa10.36□□□□□ -0.75
TPM4-216ENST00000592822 GOLGA6L3A6NEY3 463 aa10.36□□□□□ -0.75
TPM4-216ENST00000592822 SIGLEC16A6NMB1 481 aa10.36□□□□□ -0.75
TPM4-216ENST00000592822 SLC9A3R1O14745 358 aaPredicted RBP10.36□□□□□ -0.75
TPM4-216ENST00000592822 IRAK2O43187 625 aa10.36□□□□□ -0.75
TPM4-216ENST00000592822 ATMINO43313 823 aaPredicted RBP10.36□□□□□ -0.75
TPM4-216ENST00000592822 KRT3P12035 628 aa10.36□□□□□ -0.75
TPM4-216ENST00000592822 TFE3P19532 575 aaPredicted RBP10.36□□□□□ -0.75
TPM4-216ENST00000592822 CORO1AP31146 461 aaKnown RBP10.36□□□□□ -0.75
TPM4-216ENST00000592822 RFC1P35251 1148 aaPredicted RBP10.36□□□□□ -0.75
TPM4-216ENST00000592822 KPNA1P52294 538 aaPredicted RBP10.36□□□□□ -0.75
TPM4-216ENST00000592822 TBX4P57082 545 aa10.36□□□□□ -0.75
TPM4-216ENST00000592822 PFKPQ01813 784 aa10.36□□□□□ -0.75
TPM4-216ENST00000592822 GFPT1Q06210 699 aaPredicted RBP10.36□□□□□ -0.75
TPM4-216ENST00000592822 RING1Q06587 406 aa10.36□□□□□ -0.75
TPM4-216ENST00000592822 RUNX3Q13761 415 aa10.36□□□□□ -0.75
TPM4-216ENST00000592822 ITPRIPL2Q3MIP1 535 aa10.36□□□□□ -0.75
TPM4-216ENST00000592822 SLC44A4Q53GD3 710 aa10.36□□□□□ -0.75
TPM4-216ENST00000592822 PPP1R15BQ5SWA1 713 aa10.36□□□□□ -0.75
TPM4-216ENST00000592822 ALKBH5Q6P6C2 394 aaKnown RBP10.36□□□□□ -0.75
TPM4-216ENST00000592822 TRIM67Q6ZTA4 783 aa10.36□□□□□ -0.75
TPM4-216ENST00000592822 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.36□□□□□ -0.75
TPM4-216ENST00000592822 DENND1CQ8IV53 801 aa10.36□□□□□ -0.75
TPM4-216ENST00000592822 ADGRG2Q8IZP9 1017 aa10.36□□□□□ -0.75
TPM4-216ENST00000592822 EMC1Q8N766 993 aa10.36□□□□□ -0.75
TPM4-216ENST00000592822 SPC24Q8NBT2 197 aa10.36□□□□□ -0.75
TPM4-216ENST00000592822 TTC8Q8TAM2 541 aa10.36□□□□□ -0.75
TPM4-216ENST00000592822 SLC39A13Q96H72 371 aa10.36□□□□□ -0.75
TPM4-216ENST00000592822 FCRL2Q96LA5 508 aaPredicted RBP10.36□□□□□ -0.75
TPM4-216ENST00000592822 SERPINB11Q96P15 392 aa10.36□□□□□ -0.75
TPM4-216ENST00000592822 PANX2Q96RD6 677 aa10.36□□□□□ -0.75
TPM4-216ENST00000592822 DDX23Q9BUQ8 820 aaKnown RBP10.36□□□□□ -0.75
TPM4-216ENST00000592822 DCLK3Q9C098 648 aa10.36□□□□□ -0.75
TPM4-216ENST00000592822 FAM204AQ9H8W3 233 aa10.36□□□□□ -0.75
TPM4-216ENST00000592822 NHEJ1Q9H9Q4 299 aaPredicted RBP10.36□□□□□ -0.75
TPM4-216ENST00000592822 HEBP1Q9NRV9 189 aa10.36□□□□□ -0.75
TPM4-216ENST00000592822 CALCOCO1Q9P1Z2 691 aa10.36□□□□□ -0.75
TPM4-216ENST00000592822 TBC1D14Q9P2M4 693 aa10.36□□□□□ -0.75
TPM4-216ENST00000592822 LSM7Q9UK45 103 aaKnown RBP10.36□□□□□ -0.75
TPM4-216ENST00000592822 AGO1Q9UL18 857 aaKnown RBP10.36□□□□□ -0.75
TPM4-216ENST00000592822 CA14Q9ULX7 337 aa10.36□□□□□ -0.75
TPM4-216ENST00000592822 TLR6Q9Y2C9 796 aa10.36□□□□□ -0.75
TPM4-216ENST00000592822 SHISA7A6NL88 538 aa10.35□□□□□ -0.75
TPM4-216ENST00000592822 C2CD4BA6NLJ0 364 aa10.35□□□□□ -0.75
TPM4-216ENST00000592822 M0QYT0 321 aa10.35□□□□□ -0.75
TPM4-216ENST00000592822 DLL1O00548 723 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms