RNA–Protein interactions for RNA: ENST00000592643.5

H3F3B-212, Transcript of H3 histone family member 3B, humanhuman

TSL 3 BASIC

Gene H3F3B, Length 795 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-212ENST00000592643 GOLGA6L19H0YKK7 550 aa12.38□□□□□ -0.43
H3F3B-212ENST00000592643 TRDMT1O14717 391 aaKnown RBP12.38□□□□□ -0.43
H3F3B-212ENST00000592643 TRIM24O15164 1050 aa12.38□□□□□ -0.43
H3F3B-212ENST00000592643 GRAP2O75791 330 aa12.38□□□□□ -0.43
H3F3B-212ENST00000592643 LSM8O95777 96 aaKnown RBP12.38□□□□□ -0.43
H3F3B-212ENST00000592643 GYPCP04921 128 aa12.38□□□□□ -0.43
H3F3B-212ENST00000592643 SLC6A11P48066 632 aa12.38□□□□□ -0.43
H3F3B-212ENST00000592643 IFNAR2P48551 515 aa12.38□□□□□ -0.43
H3F3B-212ENST00000592643 GALK1P51570 392 aa12.38□□□□□ -0.43
H3F3B-212ENST00000592643 KPNA1P52294 538 aaPredicted RBP12.38□□□□□ -0.43
H3F3B-212ENST00000592643 TCF15Q12870 199 aa12.38□□□□□ -0.43
H3F3B-212ENST00000592643 UBXN2BQ14CS0 331 aa12.38□□□□□ -0.43
H3F3B-212ENST00000592643 PON2Q15165 354 aa12.38□□□□□ -0.43
H3F3B-212ENST00000592643 FILIP1LQ4L180 1135 aa12.38□□□□□ -0.43
H3F3B-212ENST00000592643 TMEM196Q5HYL7 178 aa12.38□□□□□ -0.43
H3F3B-212ENST00000592643 ARTNQ5T4W7 220 aa12.38□□□□□ -0.43
H3F3B-212ENST00000592643 HGSNATQ68CP4 663 aa12.38□□□□□ -0.43
H3F3B-212ENST00000592643 PKN3Q6P5Z2 889 aa12.38□□□□□ -0.43
H3F3B-212ENST00000592643 Q6ZS52 159 aa12.38□□□□□ -0.43
H3F3B-212ENST00000592643 TAC4Q86UU9 113 aa12.38□□□□□ -0.43
H3F3B-212ENST00000592643 DDX42Q86XP3 938 aaKnown RBP eCLIP12.38□□□□□ -0.434e-9■□□□□ 9.6
H3F3B-212ENST00000592643 ZNF677Q86XU0 584 aa12.38□□□□□ -0.43
H3F3B-212ENST00000592643 DNAAF5Q86Y56 855 aa12.38□□□□□ -0.43
H3F3B-212ENST00000592643 ETFBKMTQ8IXQ9 262 aa12.38□□□□□ -0.43
H3F3B-212ENST00000592643 FAM217AQ8IXS0 508 aa12.38□□□□□ -0.43
H3F3B-212ENST00000592643 TMEM35BQ8NCS4 154 aa12.38□□□□□ -0.43
H3F3B-212ENST00000592643 SLC30A5Q8TAD4 765 aa12.38□□□□□ -0.43
H3F3B-212ENST00000592643 ADAM32Q8TC27 787 aa12.38□□□□□ -0.43
H3F3B-212ENST00000592643 MYEOVQ96EZ4 313 aa12.38□□□□□ -0.43
H3F3B-212ENST00000592643 SLC39A13Q96H72 371 aa12.38□□□□□ -0.43
H3F3B-212ENST00000592643 SHDQ96IW2 340 aa12.38□□□□□ -0.43
H3F3B-212ENST00000592643 FCRL2Q96LA5 508 aaPredicted RBP12.38□□□□□ -0.43
H3F3B-212ENST00000592643 OSBPL6Q9BZF3 934 aa12.38□□□□□ -0.43
H3F3B-212ENST00000592643 NACA2Q9H009 215 aa12.38□□□□□ -0.43
H3F3B-212ENST00000592643 TAS2R14Q9NYV8 317 aa12.38□□□□□ -0.43
H3F3B-212ENST00000592643 AIPL1Q9NZN9 384 aa12.38□□□□□ -0.43
H3F3B-212ENST00000592643 NDRG2Q9UN36 371 aaKnown RBP12.38□□□□□ -0.43
H3F3B-212ENST00000592643 SIT1Q9Y3P8 196 aa12.38□□□□□ -0.43
H3F3B-212ENST00000592643 TCRBV5S1A1TA0A578 114 aa12.37□□□□□ -0.43
H3F3B-212ENST00000592643 I6L893 689 aaPredicted RBP12.37□□□□□ -0.43
H3F3B-212ENST00000592643 MAN2B1O00754 1011 aa12.37□□□□□ -0.43
H3F3B-212ENST00000592643 NCAM1P13591 858 aa12.37□□□□□ -0.43
H3F3B-212ENST00000592643 MMP8P22894 467 aa12.37□□□□□ -0.43
H3F3B-212ENST00000592643 CORO1AP31146 461 aaKnown RBP12.37□□□□□ -0.43
H3F3B-212ENST00000592643 YWHAZP63104 245 aaKnown RBP12.37□□□□□ -0.43
H3F3B-212ENST00000592643 SLC6A3Q01959 620 aa12.37□□□□□ -0.43
H3F3B-212ENST00000592643 CLEC16AQ2KHT3 1053 aa12.37□□□□□ -0.43
H3F3B-212ENST00000592643 RSRC2Q7L4I2 434 aaKnown RBP12.37□□□□□ -0.43
H3F3B-212ENST00000592643 SLC26A9Q7LBE3 791 aa12.37□□□□□ -0.43
H3F3B-212ENST00000592643 ZNF571Q7Z3V5 609 aaPredicted RBP12.37□□□□□ -0.43
H3F3B-212ENST00000592643 DENND1CQ8IV53 801 aa12.37□□□□□ -0.43
H3F3B-212ENST00000592643 DEFB106AQ8N104 65 aa12.37□□□□□ -0.43
H3F3B-212ENST00000592643 CPA6Q8N4T0 437 aa12.37□□□□□ -0.43
H3F3B-212ENST00000592643 ZNF397Q8NF99 534 aaPredicted RBP12.37□□□□□ -0.43
H3F3B-212ENST00000592643 FAM149B1Q96BN6 582 aa12.37□□□□□ -0.43
H3F3B-212ENST00000592643 CDK5RAP1Q96SZ6 601 aaKnown RBP12.37□□□□□ -0.43
H3F3B-212ENST00000592643 AGPAT1Q99943 283 aa12.37□□□□□ -0.43
H3F3B-212ENST00000592643 POLR3BQ9NW08 1133 aaPredicted RBP12.37□□□□□ -0.43
H3F3B-212ENST00000592643 XPO7Q9UIA9 1087 aaKnown RBP12.37□□□□□ -0.43
H3F3B-212ENST00000592643 STOML2Q9UJZ1 356 aa12.37□□□□□ -0.43
H3F3B-212ENST00000592643 TMEM59LQ9UK28 342 aa12.37□□□□□ -0.43
H3F3B-212ENST00000592643 HCN2Q9UL51 889 aa12.37□□□□□ -0.43
H3F3B-212ENST00000592643 CLEC4EQ9ULY5 219 aa12.37□□□□□ -0.43
H3F3B-212ENST00000592643 MYO6Q9UM54 1294 aa12.37□□□□□ -0.43
H3F3B-212ENST00000592643 SH3BP1Q9Y3L3 701 aa12.37□□□□□ -0.43
H3F3B-212ENST00000592643 HBS1LQ9Y450 684 aaKnown RBP12.37□□□□□ -0.43
H3F3B-212ENST00000592643 A0A1W2PQJ5 194 aa12.36□□□□□ -0.43
H3F3B-212ENST00000592643 HOXC11O43248 304 aaPredicted RBP12.36□□□□□ -0.43
H3F3B-212ENST00000592643 GJB6O95452 261 aa12.36□□□□□ -0.43
H3F3B-212ENST00000592643 NFATC1O95644 943 aa12.36□□□□□ -0.43
H3F3B-212ENST00000592643 EGFP01133 1207 aa12.36□□□□□ -0.43
H3F3B-212ENST00000592643 GLI1P08151 1106 aa12.36□□□□□ -0.43
H3F3B-212ENST00000592643 COL9A1P20849 921 aa12.36□□□□□ -0.43
H3F3B-212ENST00000592643 FLT3P36888 993 aa12.36□□□□□ -0.43
H3F3B-212ENST00000592643 PRKCIP41743 596 aa12.36□□□□□ -0.43
H3F3B-212ENST00000592643 SGSHP51688 502 aa12.36□□□□□ -0.43
H3F3B-212ENST00000592643 COG7P83436 770 aa12.36□□□□□ -0.43
H3F3B-212ENST00000592643 CENPCQ03188 943 aa12.36□□□□□ -0.43
H3F3B-212ENST00000592643 RAB6CQ53S08 254 aa12.36□□□□□ -0.43
H3F3B-212ENST00000592643 FAM133BQ5BKY9 247 aaKnown RBP12.36□□□□□ -0.43
H3F3B-212ENST00000592643 FYB2Q5VWT5 728 aa12.36□□□□□ -0.43
H3F3B-212ENST00000592643 NADSYN1Q6IA69 706 aa12.36□□□□□ -0.43
H3F3B-212ENST00000592643 OR6B2Q6IFH4 312 aa12.36□□□□□ -0.43
H3F3B-212ENST00000592643 MMS22LQ6ZRQ5 1243 aa12.36□□□□□ -0.43
H3F3B-212ENST00000592643 CACNA2D4Q7Z3S7 1137 aa12.36□□□□□ -0.43
H3F3B-212ENST00000592643 BNIPLQ7Z465 357 aa12.36□□□□□ -0.43
H3F3B-212ENST00000592643 PHLDB2Q86SQ0 1253 aa12.36□□□□□ -0.43
H3F3B-212ENST00000592643 TADA2BQ86TJ2 420 aa12.36□□□□□ -0.43
H3F3B-212ENST00000592643 ERICH1Q86X53 443 aa12.36□□□□□ -0.43
H3F3B-212ENST00000592643 SUGP1Q8IWZ8 645 aaKnown RBP12.36□□□□□ -0.43
H3F3B-212ENST00000592643 DTWD2Q8NBA8 298 aa12.36□□□□□ -0.43
H3F3B-212ENST00000592643 RNF139Q8WU17 664 aa12.36□□□□□ -0.43
H3F3B-212ENST00000592643 NT5C3BQ969T7 300 aa12.36□□□□□ -0.43
H3F3B-212ENST00000592643 OTUB2Q96DC9 234 aa12.36□□□□□ -0.43
H3F3B-212ENST00000592643 C18orf8Q96DM3 657 aa12.36□□□□□ -0.43
H3F3B-212ENST00000592643 MSANTD3Q96H12 275 aa12.36□□□□□ -0.43
H3F3B-212ENST00000592643 EDEM3Q9BZQ6 932 aa12.36□□□□□ -0.43
H3F3B-212ENST00000592643 RAB6CQ9H0N0 254 aa12.36□□□□□ -0.43
H3F3B-212ENST00000592643 HAUS4Q9H6D7 363 aa12.36□□□□□ -0.43
H3F3B-212ENST00000592643 LMAN1LQ9HAT1 526 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms