RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 MAN2A1Q16706 1144 aa11.79□□□□□ -0.52
SMAD4-211ENST00000590499 GAB4Q2WGN9 574 aa11.79□□□□□ -0.52
SMAD4-211ENST00000590499 TMEM196Q5HYL7 178 aa11.79□□□□□ -0.52
SMAD4-211ENST00000590499 MIIPQ5JXC2 388 aa11.79□□□□□ -0.52
SMAD4-211ENST00000590499 KLHDC10Q6PID8 442 aa11.79□□□□□ -0.52
SMAD4-211ENST00000590499 LCLAT1Q6UWP7 414 aa11.79□□□□□ -0.52
SMAD4-211ENST00000590499 BHLHA9Q7RTU4 235 aa11.79□□□□□ -0.52
SMAD4-211ENST00000590499 DDX42Q86XP3 938 aaKnown RBP eCLIP11.79□□□□□ -0.52
SMAD4-211ENST00000590499 CPA6Q8N4T0 437 aa11.79□□□□□ -0.52
SMAD4-211ENST00000590499 ZNF276Q8N554 614 aa11.79□□□□□ -0.52
SMAD4-211ENST00000590499 RBBP8NLQ8NC74 664 aaPredicted RBP11.79□□□□□ -0.52
SMAD4-211ENST00000590499 ATOH1Q92858 354 aaPredicted RBP11.79□□□□□ -0.52
SMAD4-211ENST00000590499 CRACR2AQ9BSW2 395 aa11.79□□□□□ -0.52
SMAD4-211ENST00000590499 LMAN1LQ9HAT1 526 aa11.79□□□□□ -0.52
SMAD4-211ENST00000590499 RBM12Q9NTZ6 932 aaKnown RBP11.79□□□□□ -0.52
SMAD4-211ENST00000590499 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.79□□□□□ -0.52
SMAD4-211ENST00000590499 SPATA6Q9NWH7 488 aaPredicted RBP11.79□□□□□ -0.52
SMAD4-211ENST00000590499 CFAP97Q9P2B7 532 aa11.79□□□□□ -0.52
SMAD4-211ENST00000590499 PCDHB4Q9Y5E5 795 aa11.79□□□□□ -0.52
SMAD4-211ENST00000590499 EP300Q09472 2414 aaPredicted RBP11.79□□□□□ -0.52
SMAD4-211ENST00000590499 ZNF292O60281 2723 aa11.79□□□□□ -0.52
SMAD4-211ENST00000590499 E2F8A0AVK6 867 aa11.78□□□□□ -0.52
SMAD4-211ENST00000590499 GREM1O60565 184 aa11.78□□□□□ -0.52
SMAD4-211ENST00000590499 TBX18O95935 607 aa11.78□□□□□ -0.52
SMAD4-211ENST00000590499 MBD3O95983 291 aa11.78□□□□□ -0.52
SMAD4-211ENST00000590499 CALCAP01258 141 aa11.78□□□□□ -0.52
SMAD4-211ENST00000590499 SP9P0CG40 484 aa11.78□□□□□ -0.52
SMAD4-211ENST00000590499 TDGF1P13385 188 aa11.78□□□□□ -0.52
SMAD4-211ENST00000590499 SLC9A1P19634 815 aa11.78□□□□□ -0.52
SMAD4-211ENST00000590499 MTIF2P46199 727 aaKnown RBP11.78□□□□□ -0.52
SMAD4-211ENST00000590499 PLA2G4AP47712 749 aa11.78□□□□□ -0.52
SMAD4-211ENST00000590499 BST2Q10589 180 aaKnown RBP11.78□□□□□ -0.52
SMAD4-211ENST00000590499 LRRC32Q14392 662 aa11.78□□□□□ -0.52
SMAD4-211ENST00000590499 DGKKQ5KSL6 1271 aa11.78□□□□□ -0.52
SMAD4-211ENST00000590499 NAIF1Q69YI7 327 aaPredicted RBP11.78□□□□□ -0.52
SMAD4-211ENST00000590499 PM20D1Q6GTS8 502 aa11.78□□□□□ -0.52
SMAD4-211ENST00000590499 FSTL4Q6MZW2 842 aa11.78□□□□□ -0.52
SMAD4-211ENST00000590499 DPY19L2P1Q6NXN4 242 aa11.78□□□□□ -0.52
SMAD4-211ENST00000590499 Q6ZS52 159 aa11.78□□□□□ -0.52
SMAD4-211ENST00000590499 FAM114A1Q8IWE2 563 aa11.78□□□□□ -0.52
SMAD4-211ENST00000590499 TTC16Q8NEE8 873 aa11.78□□□□□ -0.52
SMAD4-211ENST00000590499 NELL1Q92832 810 aa11.78□□□□□ -0.52
SMAD4-211ENST00000590499 WBP2Q969T9 261 aa11.78□□□□□ -0.52
SMAD4-211ENST00000590499 FBRSL1Q9HCM7 1045 aaKnown RBP11.78□□□□□ -0.52
SMAD4-211ENST00000590499 SIX2Q9NPC8 291 aa11.78□□□□□ -0.52
SMAD4-211ENST00000590499 CLIC5Q9NZA1 410 aa11.78□□□□□ -0.52
SMAD4-211ENST00000590499 FBXO4Q9UKT5 387 aa11.78□□□□□ -0.52
SMAD4-211ENST00000590499 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.78□□□□□ -0.52
SMAD4-211ENST00000590499 PTPRZ1P23471 2315 aaPredicted RBP11.78□□□□□ -0.52
SMAD4-211ENST00000590499 MYO18AQ92614 2054 aaKnown RBP11.77□□□□□ -0.52
SMAD4-211ENST00000590499 BECN2A8MW95 431 aa11.77□□□□□ -0.53
SMAD4-211ENST00000590499 SLC9A3R1O14745 358 aaPredicted RBP11.77□□□□□ -0.53
SMAD4-211ENST00000590499 SCAMP3O14828 347 aaKnown RBP11.77□□□□□ -0.53
SMAD4-211ENST00000590499 SPINT1O43278 529 aa11.77□□□□□ -0.53
SMAD4-211ENST00000590499 NFATC1O95644 943 aa11.77□□□□□ -0.53
SMAD4-211ENST00000590499 CYP17A1P05093 508 aa11.77□□□□□ -0.53
SMAD4-211ENST00000590499 SETSIPP0DME0 302 aa11.77□□□□□ -0.53
SMAD4-211ENST00000590499 RARGP13631 454 aa11.77□□□□□ -0.53
SMAD4-211ENST00000590499 BRD2P25440 801 aaKnown RBP11.77□□□□□ -0.53
SMAD4-211ENST00000590499 PON1P27169 355 aa11.77□□□□□ -0.53
SMAD4-211ENST00000590499 TKTL1P51854 596 aa11.77□□□□□ -0.53
SMAD4-211ENST00000590499 SLC8A3P57103 927 aa11.77□□□□□ -0.53
SMAD4-211ENST00000590499 APBA1Q02410 837 aa11.77□□□□□ -0.53
SMAD4-211ENST00000590499 CNGA2Q16280 664 aa11.77□□□□□ -0.53
SMAD4-211ENST00000590499 TPD52L1Q16890 204 aaPredicted RBP11.77□□□□□ -0.53
SMAD4-211ENST00000590499 EXOC3L4Q17RC7 722 aa11.77□□□□□ -0.53
SMAD4-211ENST00000590499 ZNF528Q3MIS6 628 aa11.77□□□□□ -0.53
SMAD4-211ENST00000590499 GJB7Q6PEY0 223 aa11.77□□□□□ -0.53
SMAD4-211ENST00000590499 GBP6Q6ZN66 633 aa11.77□□□□□ -0.53
SMAD4-211ENST00000590499 ENOSF1Q7L5Y1 443 aa11.77□□□□□ -0.53
SMAD4-211ENST00000590499 ADGRG2Q8IZP9 1017 aa11.77□□□□□ -0.53
SMAD4-211ENST00000590499 SCML4Q8N228 414 aa11.77□□□□□ -0.53
SMAD4-211ENST00000590499 SYNPOQ8N3V7 929 aa11.77□□□□□ -0.53
SMAD4-211ENST00000590499 UBA3Q8TBC4 463 aa11.77□□□□□ -0.53
SMAD4-211ENST00000590499 ENOX1Q8TC92 643 aaKnown RBP11.77□□□□□ -0.53
SMAD4-211ENST00000590499 SLC35F5Q8WV83 523 aa11.77□□□□□ -0.53
SMAD4-211ENST00000590499 KCTD13Q8WZ19 329 aa11.77□□□□□ -0.53
SMAD4-211ENST00000590499 EZH1Q92800 747 aaPredicted RBP11.77□□□□□ -0.53
SMAD4-211ENST00000590499 TUBGCP2Q9BSJ2 902 aa11.77□□□□□ -0.53
SMAD4-211ENST00000590499 UBE2TQ9NPD8 197 aaPredicted RBP11.77□□□□□ -0.53
SMAD4-211ENST00000590499 SAMSN1Q9NSI8 373 aaKnown RBP11.77□□□□□ -0.53
SMAD4-211ENST00000590499 HESX1Q9UBX0 185 aa11.77□□□□□ -0.53
SMAD4-211ENST00000590499 APEX2Q9UBZ4 518 aa11.77□□□□□ -0.53
SMAD4-211ENST00000590499 AJAP1Q9UKB5 411 aaPredicted RBP11.77□□□□□ -0.53
SMAD4-211ENST00000590499 FIGNL2A6NMB9 653 aa11.76□□□□□ -0.53
SMAD4-211ENST00000590499 ESPNB1AK53 854 aa11.76□□□□□ -0.53
SMAD4-211ENST00000590499 KCNJ18B7U540 433 aa11.76□□□□□ -0.53
SMAD4-211ENST00000590499 ERVH48-1M5A8F1 160 aa11.76□□□□□ -0.53
SMAD4-211ENST00000590499 MDM4O15151 490 aa11.76□□□□□ -0.53
SMAD4-211ENST00000590499 LAMTOR5O43504 91 aa11.76□□□□□ -0.53
SMAD4-211ENST00000590499 PAPSS2O95340 614 aaPredicted RBP11.76□□□□□ -0.53
SMAD4-211ENST00000590499 FBXO45P0C2W1 286 aa11.76□□□□□ -0.53
SMAD4-211ENST00000590499 ATP5C1P36542 298 aaKnown RBP11.76□□□□□ -0.53
SMAD4-211ENST00000590499 OPRD1P41143 372 aa11.76□□□□□ -0.53
SMAD4-211ENST00000590499 RPL34P49207 117 aaKnown RBP11.76□□□□□ -0.53
SMAD4-211ENST00000590499 MRE11P49959 708 aa11.76□□□□□ -0.53
SMAD4-211ENST00000590499 GALK1P51570 392 aa11.76□□□□□ -0.53
SMAD4-211ENST00000590499 AMPD2Q01433 879 aa11.76□□□□□ -0.53
SMAD4-211ENST00000590499 KCNJ12Q14500 433 aa11.76□□□□□ -0.53
SMAD4-211ENST00000590499 DHCR24Q15392 516 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms