RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 XYLT1Q86Y38 959 aa22.24■■□□□ 1.15
ATG4D-212ENST00000590096 BBS7Q8IWZ6 715 aa22.24■■□□□ 1.15
ATG4D-212ENST00000590096 SLC30A5Q8TAD4 765 aa22.24■■□□□ 1.15
ATG4D-212ENST00000590096 SERPINB11Q96P15 392 aa22.24■■□□□ 1.15
ATG4D-212ENST00000590096 ZNF510Q9Y2H8 683 aa22.24■■□□□ 1.15
ATG4D-212ENST00000590096 SPECC1L-ADORA2AF8WAN1 911 aa22.23■■□□□ 1.15
ATG4D-212ENST00000590096 MSI1O43347 362 aaKnown RBP22.23■■□□□ 1.15
ATG4D-212ENST00000590096 GRAP2O75791 330 aa22.23■■□□□ 1.15
ATG4D-212ENST00000590096 PLA2G5P39877 138 aa22.23■■□□□ 1.15
ATG4D-212ENST00000590096 SOX9P48436 509 aa22.23■■□□□ 1.15
ATG4D-212ENST00000590096 C2CD6Q53TS8 623 aa22.23■■□□□ 1.15
ATG4D-212ENST00000590096 DCAF6Q58WW2 860 aa22.23■■□□□ 1.15
ATG4D-212ENST00000590096 FAM102AQ5T9C2 384 aaPredicted RBP22.23■■□□□ 1.15
ATG4D-212ENST00000590096 PPP1R2P3Q6NXS1 205 aa22.23■■□□□ 1.15
ATG4D-212ENST00000590096 SUGP1Q8IWZ8 645 aaKnown RBP22.23■■□□□ 1.15
ATG4D-212ENST00000590096 FBXL6Q8N531 539 aa22.23■■□□□ 1.15
ATG4D-212ENST00000590096 DQX1Q8TE96 717 aaKnown RBP22.23■■□□□ 1.15
ATG4D-212ENST00000590096 C11orf70Q9BRQ4 267 aa22.23■■□□□ 1.15
ATG4D-212ENST00000590096 MRPS17Q9Y2R5 130 aaKnown RBP22.23■■□□□ 1.15
ATG4D-212ENST00000590096 BZW2Q9Y6E2 419 aaKnown RBP22.23■■□□□ 1.15
ATG4D-212ENST00000590096 KANSL1LA0AUZ9 987 aa22.22■■□□□ 1.15
ATG4D-212ENST00000590096 GOLGA8SH3BPF8 625 aa22.22■■□□□ 1.15
ATG4D-212ENST00000590096 DAB1O75553 588 aa22.22■■□□□ 1.15
ATG4D-212ENST00000590096 CALB1P05937 261 aa22.22■■□□□ 1.15
ATG4D-212ENST00000590096 SKILP12757 684 aa22.22■■□□□ 1.15
ATG4D-212ENST00000590096 MMP8P22894 467 aa22.22■■□□□ 1.15
ATG4D-212ENST00000590096 CORO1AP31146 461 aaKnown RBP22.22■■□□□ 1.15
ATG4D-212ENST00000590096 CTHP32929 405 aa22.22■■□□□ 1.15
ATG4D-212ENST00000590096 SCNN1AP37088 669 aa22.22■■□□□ 1.15
ATG4D-212ENST00000590096 HARS2P49590 506 aaKnown RBP22.22■■□□□ 1.15
ATG4D-212ENST00000590096 TRIP4Q15650 581 aaPredicted RBP22.22■■□□□ 1.15
ATG4D-212ENST00000590096 SYPL2Q5VXT5 272 aa22.22■■□□□ 1.15
ATG4D-212ENST00000590096 ZNF571Q7Z3V5 609 aaPredicted RBP22.22■■□□□ 1.15
ATG4D-212ENST00000590096 ADGRG2Q8IZP9 1017 aa22.22■■□□□ 1.15
ATG4D-212ENST00000590096 DEFB106AQ8N104 65 aa22.22■■□□□ 1.15
ATG4D-212ENST00000590096 FAM3CQ92520 227 aa22.22■■□□□ 1.15
ATG4D-212ENST00000590096 SLC2A13Q96QE2 648 aa22.22■■□□□ 1.15
ATG4D-212ENST00000590096 SYT11Q9BT88 431 aa22.22■■□□□ 1.15
ATG4D-212ENST00000590096 DDX23Q9BUQ8 820 aaKnown RBP22.22■■□□□ 1.15
ATG4D-212ENST00000590096 ADAM22Q9P0K1 906 aa22.22■■□□□ 1.15
ATG4D-212ENST00000590096 OTOL1A6NHN0 477 aaPredicted RBP22.21■■□□□ 1.15
ATG4D-212ENST00000590096 AP5Z1O43299 807 aa22.21■■□□□ 1.15
ATG4D-212ENST00000590096 GREM1O60565 184 aa22.21■■□□□ 1.15
ATG4D-212ENST00000590096 ADH1CP00326 375 aa22.21■■□□□ 1.15
ATG4D-212ENST00000590096 CYP17A1P05093 508 aa22.21■■□□□ 1.15
ATG4D-212ENST00000590096 CD72P21854 359 aa22.21■■□□□ 1.15
ATG4D-212ENST00000590096 TBX4P57082 545 aa22.21■■□□□ 1.15
ATG4D-212ENST00000590096 RNASE9P60153 205 aaKnown RBP22.21■■□□□ 1.15
ATG4D-212ENST00000590096 CDK17Q00537 523 aa22.21■■□□□ 1.15
ATG4D-212ENST00000590096 NNTQ13423 1086 aa22.21■■□□□ 1.15
ATG4D-212ENST00000590096 UBXN2BQ14CS0 331 aa22.21■■□□□ 1.15
ATG4D-212ENST00000590096 DHCR24Q15392 516 aa22.21■■□□□ 1.15
ATG4D-212ENST00000590096 Q6ZNB5 142 aa22.21■■□□□ 1.15
ATG4D-212ENST00000590096 TAC4Q86UU9 113 aa22.21■■□□□ 1.15
ATG4D-212ENST00000590096 VPS36Q86VN1 386 aa22.21■■□□□ 1.15
ATG4D-212ENST00000590096 PHF13Q86YI8 300 aaPredicted RBP22.21■■□□□ 1.15
ATG4D-212ENST00000590096 NELL2Q99435 816 aa22.21■■□□□ 1.15
ATG4D-212ENST00000590096 WDR35Q9P2L0 1181 aa22.21■■□□□ 1.15
ATG4D-212ENST00000590096 COL4A3Q01955 1670 aa22.2■■□□□ 1.15
ATG4D-212ENST00000590096 TRUB2O95900 331 aaKnown RBP22.2■■□□□ 1.14
ATG4D-212ENST00000590096 SERPING1P05155 500 aa22.2■■□□□ 1.14
ATG4D-212ENST00000590096 GJA4P35212 333 aa22.2■■□□□ 1.14
ATG4D-212ENST00000590096 TSR1Q2NL82 804 aaKnown RBP22.2■■□□□ 1.14
ATG4D-212ENST00000590096 NUGGCQ68CJ6 796 aa22.2■■□□□ 1.14
ATG4D-212ENST00000590096 CWF19L1Q69YN2 538 aaKnown RBP22.2■■□□□ 1.14
ATG4D-212ENST00000590096 ASTLQ6HA08 431 aaPredicted RBP22.2■■□□□ 1.14
ATG4D-212ENST00000590096 TMC6Q7Z403 805 aa22.2■■□□□ 1.14
ATG4D-212ENST00000590096 DENND1CQ8IV53 801 aa22.2■■□□□ 1.14
ATG4D-212ENST00000590096 UNC45BQ8IWX7 931 aa22.2■■□□□ 1.14
ATG4D-212ENST00000590096 ADAM32Q8TC27 787 aa22.2■■□□□ 1.14
ATG4D-212ENST00000590096 EXOC4Q96A65 974 aa22.2■■□□□ 1.14
ATG4D-212ENST00000590096 FOXQ1Q9C009 403 aa22.2■■□□□ 1.14
ATG4D-212ENST00000590096 FAM204AQ9H8W3 233 aa22.2■■□□□ 1.14
ATG4D-212ENST00000590096 LTB4R2Q9NPC1 389 aa22.2■■□□□ 1.14
ATG4D-212ENST00000590096 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.2■■□□□ 1.14
ATG4D-212ENST00000590096 NDRG2Q9UN36 371 aaKnown RBP22.2■■□□□ 1.14
ATG4D-212ENST00000590096 ARIH1Q9Y4X5 557 aaPredicted RBP22.2■■□□□ 1.14
ATG4D-212ENST00000590096 F5P12259 2224 aa22.19■■□□□ 1.14
ATG4D-212ENST00000590096 KLKB1P03952 638 aa22.19■■□□□ 1.14
ATG4D-212ENST00000590096 ADH5P11766 374 aa22.19■■□□□ 1.14
ATG4D-212ENST00000590096 GBP1P32455 592 aa22.19■■□□□ 1.14
ATG4D-212ENST00000590096 NOS2P35228 1153 aa22.19■■□□□ 1.14
ATG4D-212ENST00000590096 MATKP42679 507 aa22.19■■□□□ 1.14
ATG4D-212ENST00000590096 CLCN5P51795 746 aa22.19■■□□□ 1.14
ATG4D-212ENST00000590096 RING1Q06587 406 aa22.19■■□□□ 1.14
ATG4D-212ENST00000590096 C1QBPQ07021 282 aaKnown RBP22.19■■□□□ 1.14
ATG4D-212ENST00000590096 ACAD10Q6JQN1 1059 aa22.19■■□□□ 1.14
ATG4D-212ENST00000590096 RHBDF2Q6PJF5 856 aa22.19■■□□□ 1.14
ATG4D-212ENST00000590096 FAM122AQ96E09 287 aa22.19■■□□□ 1.14
ATG4D-212ENST00000590096 SPHK2Q9NRA0 654 aa22.19■■□□□ 1.14
ATG4D-212ENST00000590096 METTL5Q9NRN9 209 aaKnown RBP22.19■■□□□ 1.14
ATG4D-212ENST00000590096 RRN3Q9NYV6 651 aa22.19■■□□□ 1.14
ATG4D-212ENST00000590096 AGO1Q9UL18 857 aaKnown RBP22.19■■□□□ 1.14
ATG4D-212ENST00000590096 STAP1Q9ULZ2 295 aa22.19■■□□□ 1.14
ATG4D-212ENST00000590096 TLR6Q9Y2C9 796 aa22.19■■□□□ 1.14
ATG4D-212ENST00000590096 SIT1Q9Y3P8 196 aa22.19■■□□□ 1.14
ATG4D-212ENST00000590096 FAM170BA6NMN3 283 aa22.18■■□□□ 1.14
ATG4D-212ENST00000590096 TMCO5BA8MYB1 307 aa22.18■■□□□ 1.14
ATG4D-212ENST00000590096 NCAM2O15394 837 aa22.18■■□□□ 1.14
ATG4D-212ENST00000590096 IRAK2O43187 625 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms