RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 SDCBP2Q9H190 292 aa13.49□□□□□ -0.25
PRKCSH-210ENST00000589990 XYLT2Q9H1B5 865 aa13.49□□□□□ -0.25
PRKCSH-210ENST00000589990 OLFML3Q9NRN5 406 aa13.49□□□□□ -0.25
PRKCSH-210ENST00000589990 KRT82Q9NSB4 513 aa13.49□□□□□ -0.25
PRKCSH-210ENST00000589990 WDR35Q9P2L0 1181 aa13.49□□□□□ -0.25
PRKCSH-210ENST00000589990 THAP10Q9P2Z0 257 aaPredicted RBP13.49□□□□□ -0.25
PRKCSH-210ENST00000589990 NXF1Q9UBU9 619 aaKnown RBP13.49□□□□□ -0.25
PRKCSH-210ENST00000589990 SEL1LQ9UBV2 794 aa13.49□□□□□ -0.25
PRKCSH-210ENST00000589990 FBXO10Q9UK96 956 aa13.49□□□□□ -0.25
PRKCSH-210ENST00000589990 ANKRD6Q9Y2G4 727 aa13.49□□□□□ -0.25
PRKCSH-210ENST00000589990 PCDHB13Q9Y5F0 798 aa13.49□□□□□ -0.25
PRKCSH-210ENST00000589990 MYLKQ15746 1914 aa13.49□□□□□ -0.25
PRKCSH-210ENST00000589990 FRMD3A2A2Y4 597 aa13.48□□□□□ -0.25
PRKCSH-210ENST00000589990 ZNF233A6NK53 670 aa13.48□□□□□ -0.25
PRKCSH-210ENST00000589990 IGLV3-19P01714 112 aa13.48□□□□□ -0.25
PRKCSH-210ENST00000589990 KLKB1P03952 638 aa13.48□□□□□ -0.25
PRKCSH-210ENST00000589990 HLA-EP13747 358 aa13.48□□□□□ -0.25
PRKCSH-210ENST00000589990 CCDC130P13994 396 aa13.48□□□□□ -0.25
PRKCSH-210ENST00000589990 TNNC1P63316 161 aa13.48□□□□□ -0.25
PRKCSH-210ENST00000589990 DNAJC3Q13217 504 aa13.48□□□□□ -0.25
PRKCSH-210ENST00000589990 SF3A1Q15459 793 aaKnown RBP13.48□□□□□ -0.25
PRKCSH-210ENST00000589990 Q6ZNB5 142 aa13.48□□□□□ -0.25
PRKCSH-210ENST00000589990 GATAD2AQ86YP4 633 aa13.48□□□□□ -0.25
PRKCSH-210ENST00000589990 CCDC127Q96BQ5 260 aa13.48□□□□□ -0.25
PRKCSH-210ENST00000589990 NMUR1Q9HB89 426 aa13.48□□□□□ -0.25
PRKCSH-210ENST00000589990 TM9SF3Q9HD45 589 aa13.48□□□□□ -0.25
PRKCSH-210ENST00000589990 DMAP1Q9NPF5 467 aaPredicted RBP13.48□□□□□ -0.25
PRKCSH-210ENST00000589990 HSPBP1Q9NZL4 362 aa13.48□□□□□ -0.25
PRKCSH-210ENST00000589990 PLXNA2O75051 1894 aa13.47□□□□□ -0.25
PRKCSH-210ENST00000589990 A0A087X0B3 334 aa13.47□□□□□ -0.25
PRKCSH-210ENST00000589990 CYP26A1O43174 497 aa13.47□□□□□ -0.25
PRKCSH-210ENST00000589990 AP1G2O75843 785 aa13.47□□□□□ -0.25
PRKCSH-210ENST00000589990 GJB2P29033 226 aa13.47□□□□□ -0.25
PRKCSH-210ENST00000589990 GRK6P43250 576 aa13.47□□□□□ -0.25
PRKCSH-210ENST00000589990 AFF3P51826 1226 aaKnown RBP13.47□□□□□ -0.25
PRKCSH-210ENST00000589990 ZNF234Q14588 700 aa13.47□□□□□ -0.25
PRKCSH-210ENST00000589990 FYB2Q5VWT5 728 aa13.47□□□□□ -0.25
PRKCSH-210ENST00000589990 TMEM215Q68D42 235 aa13.47□□□□□ -0.25
PRKCSH-210ENST00000589990 SCARA5Q6ZMJ2 495 aa13.47□□□□□ -0.25
PRKCSH-210ENST00000589990 RBBP8NLQ8NC74 664 aaPredicted RBP13.47□□□□□ -0.25
PRKCSH-210ENST00000589990 PRCCQ92733 491 aaPredicted RBP13.47□□□□□ -0.25
PRKCSH-210ENST00000589990 JAKMIP2Q96AA8 810 aa13.47□□□□□ -0.25
PRKCSH-210ENST00000589990 CLIC6Q96NY7 704 aa13.47□□□□□ -0.25
PRKCSH-210ENST00000589990 ORAI3Q9BRQ5 295 aa13.47□□□□□ -0.25
PRKCSH-210ENST00000589990 NUP58Q9BVL2 599 aa13.47□□□□□ -0.25
PRKCSH-210ENST00000589990 HMGXB4Q9UGU5 601 aa13.47□□□□□ -0.25
PRKCSH-210ENST00000589990 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.47□□□□□ -0.25
PRKCSH-210ENST00000589990 H3BQV1 296 aa13.46□□□□□ -0.25
PRKCSH-210ENST00000589990 TNNI1P19237 187 aa13.46□□□□□ -0.25
PRKCSH-210ENST00000589990 OXTRP30559 389 aa13.46□□□□□ -0.25
PRKCSH-210ENST00000589990 CASP4P49662 377 aa13.46□□□□□ -0.25
PRKCSH-210ENST00000589990 CCT8P50990 548 aa13.46□□□□□ -0.25
PRKCSH-210ENST00000589990 MAP3K7CLP57077 242 aa13.46□□□□□ -0.25
PRKCSH-210ENST00000589990 SUZ12Q15022 739 aaKnown RBP13.46□□□□□ -0.25
PRKCSH-210ENST00000589990 SV2BQ7L1I2 683 aa13.46□□□□□ -0.25
PRKCSH-210ENST00000589990 ACOT1Q86TX2 421 aa13.46□□□□□ -0.25
PRKCSH-210ENST00000589990 ZNF366Q8N895 744 aa13.46□□□□□ -0.25
PRKCSH-210ENST00000589990 BIRC7Q96CA5 298 aa13.46□□□□□ -0.25
PRKCSH-210ENST00000589990 SMARCD1Q96GM5 515 aa13.46□□□□□ -0.25
PRKCSH-210ENST00000589990 PIWIL1Q96J94 861 aaKnown RBP13.46□□□□□ -0.25
PRKCSH-210ENST00000589990 CGRRF1Q99675 332 aa13.46□□□□□ -0.25
PRKCSH-210ENST00000589990 PANK2Q9BZ23 570 aa13.46□□□□□ -0.25
PRKCSH-210ENST00000589990 CYLDQ9NQC7 956 aa13.46□□□□□ -0.25
PRKCSH-210ENST00000589990 PANK4Q9NVE7 773 aa13.46□□□□□ -0.25
PRKCSH-210ENST00000589990 STK17AQ9UEE5 414 aa13.46□□□□□ -0.25
PRKCSH-210ENST00000589990 SLC27A6Q9Y2P4 619 aa13.46□□□□□ -0.25
PRKCSH-210ENST00000589990 CLIC4Q9Y696 253 aa13.46□□□□□ -0.25
PRKCSH-210ENST00000589990 A0A1W2PQH9 124 aa13.45□□□□□ -0.26
PRKCSH-210ENST00000589990 PCDHGA12O60330 932 aa13.45□□□□□ -0.26
PRKCSH-210ENST00000589990 SYNCRIPO60506 623 aaKnown RBP13.45□□□□□ -0.26
PRKCSH-210ENST00000589990 STC2O76061 302 aa13.45□□□□□ -0.26
PRKCSH-210ENST00000589990 PENKP01210 267 aaPredicted RBP13.45□□□□□ -0.26
PRKCSH-210ENST00000589990 EPHX1P07099 455 aa13.45□□□□□ -0.26
PRKCSH-210ENST00000589990 ATP5C1P36542 298 aaKnown RBP13.45□□□□□ -0.26
PRKCSH-210ENST00000589990 CTSKP43235 329 aa13.45□□□□□ -0.26
PRKCSH-210ENST00000589990 TARDBPQ13148 414 aaKnown RBP eCLIP13.45□□□□□ -0.26
PRKCSH-210ENST00000589990 SNRNP35Q16560 246 aaKnown RBP13.45□□□□□ -0.26
PRKCSH-210ENST00000589990 RRAGBQ5VZM2 374 aa13.45□□□□□ -0.26
PRKCSH-210ENST00000589990 TMPRSS12Q86WS5 348 aa13.45□□□□□ -0.26
PRKCSH-210ENST00000589990 C12orf29Q8N999 325 aa13.45□□□□□ -0.26
PRKCSH-210ENST00000589990 PLEKHO2Q8TD55 490 aa13.45□□□□□ -0.26
PRKCSH-210ENST00000589990 SLC2A14Q8TDB8 520 aa13.45□□□□□ -0.26
PRKCSH-210ENST00000589990 IGSF8Q969P0 613 aa13.45□□□□□ -0.26
PRKCSH-210ENST00000589990 NXPE2Q96DL1 559 aa13.45□□□□□ -0.26
PRKCSH-210ENST00000589990 TLR8Q9NR97 1041 aaKnown RBP13.45□□□□□ -0.26
PRKCSH-210ENST00000589990 FTSJ1Q9UET6 329 aa13.45□□□□□ -0.26
PRKCSH-210ENST00000589990 DNMT3LQ9UJW3 386 aa13.45□□□□□ -0.26
PRKCSH-210ENST00000589990 FBXO2Q9UK22 296 aaPredicted RBP13.45□□□□□ -0.26
PRKCSH-210ENST00000589990 LSM7Q9UK45 103 aaKnown RBP13.45□□□□□ -0.26
PRKCSH-210ENST00000589990 AK5Q9Y6K8 562 aa13.45□□□□□ -0.26
PRKCSH-210ENST00000589990 COL5A1P20908 1838 aaPredicted RBP13.44□□□□□ -0.26
PRKCSH-210ENST00000589990 HHLA1C9JL84 531 aa13.44□□□□□ -0.26
PRKCSH-210ENST00000589990 J3QKU1 62 aa13.44□□□□□ -0.26
PRKCSH-210ENST00000589990 CLIC2O15247 247 aa13.44□□□□□ -0.26
PRKCSH-210ENST00000589990 TGFB1I1O43294 461 aa13.44□□□□□ -0.26
PRKCSH-210ENST00000589990 FSBPO95073 299 aa13.44□□□□□ -0.26
PRKCSH-210ENST00000589990 CD2BP2O95400 341 aaKnown RBP13.44□□□□□ -0.26
PRKCSH-210ENST00000589990 HMBSP08397 361 aa13.44□□□□□ -0.26
PRKCSH-210ENST00000589990 FAM163BP0C2L3 166 aa13.44□□□□□ -0.26
PRKCSH-210ENST00000589990 ACADMP11310 421 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms