RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 PGBD3Q8N328 593 aa12.82□□□□□ -0.36
VAT1-206ENST00000589709 UBR7Q8N806 425 aa12.82□□□□□ -0.36
VAT1-206ENST00000589709 CNTNAP3BQ96NU0 1288 aa12.82□□□□□ -0.36
VAT1-206ENST00000589709 CNTNAP3Q9BZ76 1288 aa12.82□□□□□ -0.36
VAT1-206ENST00000589709 CD248Q9HCU0 757 aa12.82□□□□□ -0.36
VAT1-206ENST00000589709 MARCH2Q9P0N8 246 aa12.82□□□□□ -0.36
VAT1-206ENST00000589709 EVLQ9UI08 416 aaPredicted RBP12.82□□□□□ -0.36
VAT1-206ENST00000589709 MBD1Q9UIS9 605 aaPredicted RBP12.82□□□□□ -0.36
VAT1-206ENST00000589709 STRIP2Q9ULQ0 834 aa12.82□□□□□ -0.36
VAT1-206ENST00000589709 EPG5Q9HCE0 2579 aa12.82□□□□□ -0.36
VAT1-206ENST00000589709 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.81□□□□□ -0.36
VAT1-206ENST00000589709 C4orf47A7E2U8 309 aa12.81□□□□□ -0.36
VAT1-206ENST00000589709 PSMA7O14818 248 aa12.81□□□□□ -0.36
VAT1-206ENST00000589709 XPO1O14980 1071 aaKnown RBP12.81□□□□□ -0.36
VAT1-206ENST00000589709 NPC1O15118 1278 aa12.81□□□□□ -0.36
VAT1-206ENST00000589709 ZNF217O75362 1048 aa12.81□□□□□ -0.36
VAT1-206ENST00000589709 VDRP11473 427 aa12.81□□□□□ -0.36
VAT1-206ENST00000589709 TBXAS1P24557 533 aaPredicted RBP12.81□□□□□ -0.36
VAT1-206ENST00000589709 HOXD12P35452 270 aa12.81□□□□□ -0.36
VAT1-206ENST00000589709 TKTL1P51854 596 aa12.81□□□□□ -0.36
VAT1-206ENST00000589709 BCAT1P54687 386 aa12.81□□□□□ -0.36
VAT1-206ENST00000589709 YWHAGP61981 247 aaKnown RBP eCLIP12.81□□□□□ -0.36
VAT1-206ENST00000589709 PDE4CQ08493 712 aa12.81□□□□□ -0.36
VAT1-206ENST00000589709 STIM1Q13586 685 aa12.81□□□□□ -0.36
VAT1-206ENST00000589709 SGO2Q562F6 1265 aa12.81□□□□□ -0.36
VAT1-206ENST00000589709 N4BP2L1Q5TBK1 243 aaPredicted RBP12.81□□□□□ -0.36
VAT1-206ENST00000589709 DAB2IPQ5VWQ8 1189 aa12.81□□□□□ -0.36
VAT1-206ENST00000589709 FYB2Q5VWT5 728 aa12.81□□□□□ -0.36
VAT1-206ENST00000589709 SLC36A4Q6YBV0 504 aa12.81□□□□□ -0.36
VAT1-206ENST00000589709 TOGARAM2Q6ZUX3 1019 aa12.81□□□□□ -0.36
VAT1-206ENST00000589709 SYT12Q8IV01 421 aa12.81□□□□□ -0.36
VAT1-206ENST00000589709 TMEFF1Q8IYR6 380 aa12.81□□□□□ -0.36
VAT1-206ENST00000589709 CPXM2Q8N436 756 aa12.81□□□□□ -0.36
VAT1-206ENST00000589709 FRMD1Q8N878 549 aa12.81□□□□□ -0.36
VAT1-206ENST00000589709 IPO4Q8TEX9 1081 aaKnown RBP12.81□□□□□ -0.36
VAT1-206ENST00000589709 KCTD13Q8WZ19 329 aa12.81□□□□□ -0.36
VAT1-206ENST00000589709 PIGKQ92643 395 aa12.81□□□□□ -0.36
VAT1-206ENST00000589709 CEP63Q96MT8 703 aa12.81□□□□□ -0.36
VAT1-206ENST00000589709 ACOX2Q99424 681 aa12.81□□□□□ -0.36
VAT1-206ENST00000589709 HESX1Q9UBX0 185 aa12.81□□□□□ -0.36
VAT1-206ENST00000589709 RASAL2Q9UJF2 1139 aa12.81□□□□□ -0.36
VAT1-206ENST00000589709 TSPAN16Q9UKR8 245 aa12.81□□□□□ -0.36
VAT1-206ENST00000589709 AGO1Q9UL18 857 aaKnown RBP12.81□□□□□ -0.36
VAT1-206ENST00000589709 THADAQ6YHU6 1953 aa12.81□□□□□ -0.36
VAT1-206ENST00000589709 NUP205Q92621 2012 aa12.8□□□□□ -0.36
VAT1-206ENST00000589709 TRIM49BA6NDI0 452 aa12.8□□□□□ -0.36
VAT1-206ENST00000589709 O00370 1275 aa12.8□□□□□ -0.36
VAT1-206ENST00000589709 AP5Z1O43299 807 aa12.8□□□□□ -0.36
VAT1-206ENST00000589709 KCNK5O95279 499 aa12.8□□□□□ -0.36
VAT1-206ENST00000589709 PAEPP09466 180 aa12.8□□□□□ -0.36
VAT1-206ENST00000589709 PMLP29590 882 aa12.8□□□□□ -0.36
VAT1-206ENST00000589709 CORO1AP31146 461 aaKnown RBP12.8□□□□□ -0.36
VAT1-206ENST00000589709 WASP42768 502 aa12.8□□□□□ -0.36
VAT1-206ENST00000589709 PTGER3P43115 390 aa12.8□□□□□ -0.36
VAT1-206ENST00000589709 FMO5P49326 533 aa12.8□□□□□ -0.36
VAT1-206ENST00000589709 ZNF132P52740 706 aa12.8□□□□□ -0.36
VAT1-206ENST00000589709 MFAP3P55082 362 aa12.8□□□□□ -0.36
VAT1-206ENST00000589709 IRX4P78413 519 aa12.8□□□□□ -0.36
VAT1-206ENST00000589709 BST2Q10589 180 aaKnown RBP12.8□□□□□ -0.36
VAT1-206ENST00000589709 LMAN2Q12907 356 aa12.8□□□□□ -0.36
VAT1-206ENST00000589709 E2F5Q15329 346 aa12.8□□□□□ -0.36
VAT1-206ENST00000589709 TRIP4Q15650 581 aaPredicted RBP12.8□□□□□ -0.36
VAT1-206ENST00000589709 GOLGA7BQ2TAP0 167 aa12.8□□□□□ -0.36
VAT1-206ENST00000589709 PEAR1Q5VY43 1037 aaPredicted RBP12.8□□□□□ -0.36
VAT1-206ENST00000589709 RSRC2Q7L4I2 434 aaKnown RBP12.8□□□□□ -0.36
VAT1-206ENST00000589709 BHLHA9Q7RTU4 235 aa12.8□□□□□ -0.36
VAT1-206ENST00000589709 FAM217AQ8IXS0 508 aa12.8□□□□□ -0.36
VAT1-206ENST00000589709 SCML4Q8N228 414 aa12.8□□□□□ -0.36
VAT1-206ENST00000589709 ERCC4Q92889 916 aaPredicted RBP12.8□□□□□ -0.36
VAT1-206ENST00000589709 PLD4Q96BZ4 506 aa12.8□□□□□ -0.36
VAT1-206ENST00000589709 P2RY11Q96G91 374 aa12.8□□□□□ -0.36
VAT1-206ENST00000589709 SLC2A11Q9BYW1 496 aa12.8□□□□□ -0.36
VAT1-206ENST00000589709 ULBP1Q9BZM6 244 aa12.8□□□□□ -0.36
VAT1-206ENST00000589709 LRRC4Q9HBW1 653 aa12.8□□□□□ -0.36
VAT1-206ENST00000589709 TMEM9BQ9NQ34 198 aa12.8□□□□□ -0.36
VAT1-206ENST00000589709 OLA1Q9NTK5 396 aaKnown RBP12.8□□□□□ -0.36
VAT1-206ENST00000589709 PLK2Q9NYY3 685 aa12.8□□□□□ -0.36
VAT1-206ENST00000589709 CALCOCO1Q9P1Z2 691 aa12.8□□□□□ -0.36
VAT1-206ENST00000589709 PILRBQ9UKJ0 227 aa12.8□□□□□ -0.36
VAT1-206ENST00000589709 CIZ1Q9ULV3 898 aaPredicted RBP12.8□□□□□ -0.36
VAT1-206ENST00000589709 GON4LQ3T8J9 2241 aa12.8□□□□□ -0.36
VAT1-206ENST00000589709 LAMA1P25391 3075 aa12.79□□□□□ -0.36
VAT1-206ENST00000589709 SLC12A8A0AV02 714 aa12.79□□□□□ -0.36
VAT1-206ENST00000589709 PATE3B3GLJ2 98 aa12.79□□□□□ -0.36
VAT1-206ENST00000589709 TULP2O00295 520 aa12.79□□□□□ -0.36
VAT1-206ENST00000589709 CDX4O14627 284 aaPredicted RBP12.79□□□□□ -0.36
VAT1-206ENST00000589709 P4HA2O15460 535 aa12.79□□□□□ -0.36
VAT1-206ENST00000589709 SETSIPP0DME0 302 aa12.79□□□□□ -0.36
VAT1-206ENST00000589709 CD19P15391 556 aa12.79□□□□□ -0.36
VAT1-206ENST00000589709 CSRP1P21291 193 aaKnown RBP12.79□□□□□ -0.36
VAT1-206ENST00000589709 SHC2P98077 582 aa12.79□□□□□ -0.36
VAT1-206ENST00000589709 ENPP2Q13822 863 aa12.79□□□□□ -0.36
VAT1-206ENST00000589709 PKDCCQ504Y2 493 aa12.79□□□□□ -0.36
VAT1-206ENST00000589709 TRIM61Q5EBN2 209 aa12.79□□□□□ -0.36
VAT1-206ENST00000589709 LYSMD4Q5XG99 296 aa12.79□□□□□ -0.36
VAT1-206ENST00000589709 KIAA1211LQ6NV74 962 aa12.79□□□□□ -0.36
VAT1-206ENST00000589709 SLC23A3Q6PIS1 610 aa12.79□□□□□ -0.36
VAT1-206ENST00000589709 LCLAT1Q6UWP7 414 aa12.79□□□□□ -0.36
VAT1-206ENST00000589709 METTL3Q86U44 580 aaKnown RBP12.79□□□□□ -0.36
VAT1-206ENST00000589709 DENND1CQ8IV53 801 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms