RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 HLA-EP13747 358 aa15.91■□□□□ 0.14
SF3A2-204ENST00000589118 PRKCHP24723 683 aa15.91■□□□□ 0.14
SF3A2-204ENST00000589118 ATP5C1P36542 298 aaKnown RBP15.91■□□□□ 0.14
SF3A2-204ENST00000589118 COPAP53621 1224 aa15.91■□□□□ 0.14
SF3A2-204ENST00000589118 KIF19Q2TAC6 998 aa15.91■□□□□ 0.14
SF3A2-204ENST00000589118 KCNT1Q5JUK3 1230 aa15.91■□□□□ 0.14
SF3A2-204ENST00000589118 DBX2Q6ZNG2 339 aa15.91■□□□□ 0.14
SF3A2-204ENST00000589118 CCDC73Q6ZRK6 1079 aa15.91■□□□□ 0.14
SF3A2-204ENST00000589118 EPM2AIP1Q7L775 607 aaPredicted RBP15.91■□□□□ 0.14
SF3A2-204ENST00000589118 ZNF507Q8TCN5 953 aa15.91■□□□□ 0.14
SF3A2-204ENST00000589118 SIPA1Q96FS4 1042 aa15.91■□□□□ 0.14
SF3A2-204ENST00000589118 SMARCD1Q96GM5 515 aa15.91■□□□□ 0.14
SF3A2-204ENST00000589118 ZDHHC5Q9C0B5 715 aa15.91■□□□□ 0.14
SF3A2-204ENST00000589118 C6orf106Q9H6K1 298 aaPredicted RBP15.91■□□□□ 0.14
SF3A2-204ENST00000589118 UPF2Q9HAU5 1272 aaKnown RBP15.91■□□□□ 0.14
SF3A2-204ENST00000589118 SCUBE2Q9NQ36 999 aa15.91■□□□□ 0.14
SF3A2-204ENST00000589118 TLR8Q9NR97 1041 aaKnown RBP15.91■□□□□ 0.14
SF3A2-204ENST00000589118 FBXO10Q9UK96 956 aa15.91■□□□□ 0.14
SF3A2-204ENST00000589118 CKAP5Q14008 2032 aa15.9■□□□□ 0.14
SF3A2-204ENST00000589118 CABIN1Q9Y6J0 2220 aa15.9■□□□□ 0.14
SF3A2-204ENST00000589118 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.9■□□□□ 0.14
SF3A2-204ENST00000589118 GFRA2O00451 464 aa15.9■□□□□ 0.14
SF3A2-204ENST00000589118 C1QL1O75973 258 aa15.9■□□□□ 0.14
SF3A2-204ENST00000589118 DKK1O94907 266 aa15.9■□□□□ 0.14
SF3A2-204ENST00000589118 VNN1O95497 513 aa15.9■□□□□ 0.14
SF3A2-204ENST00000589118 FAM163BP0C2L3 166 aa15.9■□□□□ 0.14
SF3A2-204ENST00000589118 RARGP13631 454 aa15.9■□□□□ 0.14
SF3A2-204ENST00000589118 ACO1P21399 889 aaKnown RBP15.9■□□□□ 0.14
SF3A2-204ENST00000589118 TXLNAP40222 546 aa15.9■□□□□ 0.14
SF3A2-204ENST00000589118 MFAP3P55082 362 aa15.9■□□□□ 0.14
SF3A2-204ENST00000589118 BIRC3Q13489 604 aa15.9■□□□□ 0.14
SF3A2-204ENST00000589118 STARD3Q14849 445 aa15.9■□□□□ 0.14
SF3A2-204ENST00000589118 PRAMEF14Q5SWL7 426 aa15.9■□□□□ 0.14
SF3A2-204ENST00000589118 DHRS13Q6UX07 377 aa15.9■□□□□ 0.14
SF3A2-204ENST00000589118 Q6ZNB5 142 aa15.9■□□□□ 0.14
SF3A2-204ENST00000589118 ZNF366Q8N895 744 aa15.9■□□□□ 0.14
SF3A2-204ENST00000589118 DUSP9Q99956 384 aaKnown RBP15.9■□□□□ 0.14
SF3A2-204ENST00000589118 KIAA1586Q9HCI6 787 aa15.9■□□□□ 0.14
SF3A2-204ENST00000589118 THAP10Q9P2Z0 257 aaPredicted RBP15.9■□□□□ 0.14
SF3A2-204ENST00000589118 LSM7Q9UK45 103 aaKnown RBP15.9■□□□□ 0.14
SF3A2-204ENST00000589118 ATP8B3O60423 1300 aa15.9■□□□□ 0.14
SF3A2-204ENST00000589118 MUC22E2RYF6 1773 aaPredicted RBP15.9■□□□□ 0.14
SF3A2-204ENST00000589118 FLNBO75369 2602 aaKnown RBP15.89■□□□□ 0.13
SF3A2-204ENST00000589118 PLXNA2O75051 1894 aa15.89■□□□□ 0.13
SF3A2-204ENST00000589118 CYSRT1A8MQ03 144 aa15.89■□□□□ 0.13
SF3A2-204ENST00000589118 HHLA1C9JL84 531 aa15.89■□□□□ 0.13
SF3A2-204ENST00000589118 CBX4O00257 560 aa15.89■□□□□ 0.13
SF3A2-204ENST00000589118 PLK4O00444 970 aa15.89■□□□□ 0.13
SF3A2-204ENST00000589118 STC2O76061 302 aa15.89■□□□□ 0.13
SF3A2-204ENST00000589118 STAU1O95793 577 aaKnown RBP15.89■□□□□ 0.13
SF3A2-204ENST00000589118 CER1O95813 267 aa15.89■□□□□ 0.13
SF3A2-204ENST00000589118 ACSL1P33121 698 aa15.89■□□□□ 0.13
SF3A2-204ENST00000589118 NDST1P52848 882 aa15.89■□□□□ 0.13
SF3A2-204ENST00000589118 ZNF234Q14588 700 aa15.89■□□□□ 0.13
SF3A2-204ENST00000589118 ZNF699Q32M78 642 aa15.89■□□□□ 0.13
SF3A2-204ENST00000589118 ZNF667Q5HYK9 610 aa15.89■□□□□ 0.13
SF3A2-204ENST00000589118 C10orf120Q5SQS8 335 aa15.89■□□□□ 0.13
SF3A2-204ENST00000589118 FYB2Q5VWT5 728 aa15.89■□□□□ 0.13
SF3A2-204ENST00000589118 TMEM215Q68D42 235 aa15.89■□□□□ 0.13
SF3A2-204ENST00000589118 SPOPLQ6IQ16 392 aa15.89■□□□□ 0.13
SF3A2-204ENST00000589118 SCD5Q86SK9 330 aa15.89■□□□□ 0.13
SF3A2-204ENST00000589118 METTL3Q86U44 580 aaKnown RBP15.89■□□□□ 0.13
SF3A2-204ENST00000589118 XXYLT1Q8NBI6 393 aa15.89■□□□□ 0.13
SF3A2-204ENST00000589118 CADM4Q8NFZ8 388 aa15.89■□□□□ 0.13
SF3A2-204ENST00000589118 PRCCQ92733 491 aaPredicted RBP15.89■□□□□ 0.13
SF3A2-204ENST00000589118 SYAP1Q96A49 352 aaPredicted RBP15.89■□□□□ 0.13
SF3A2-204ENST00000589118 TWNKQ96RR1 684 aa15.89■□□□□ 0.13
SF3A2-204ENST00000589118 CYLDQ9NQC7 956 aa15.89■□□□□ 0.13
SF3A2-204ENST00000589118 RAI2Q9Y5P3 530 aa15.89■□□□□ 0.13
SF3A2-204ENST00000589118 MYLKQ15746 1914 aa15.88■□□□□ 0.13
SF3A2-204ENST00000589118 LRRIQ3A6PVS8 624 aaPredicted RBP15.88■□□□□ 0.13
SF3A2-204ENST00000589118 ZNF883P0CG24 379 aa15.88■□□□□ 0.13
SF3A2-204ENST00000589118 ATICP31939 592 aa15.88■□□□□ 0.13
SF3A2-204ENST00000589118 DLG4P78352 724 aa15.88■□□□□ 0.13
SF3A2-204ENST00000589118 TNIP3Q96KP6 325 aa15.88■□□□□ 0.13
SF3A2-204ENST00000589118 USP28Q96RU2 1077 aa15.88■□□□□ 0.13
SF3A2-204ENST00000589118 CSNK1G1Q9HCP0 422 aa15.88■□□□□ 0.13
SF3A2-204ENST00000589118 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.88■□□□□ 0.133e-7■□□□□ 8.5
SF3A2-204ENST00000589118 COMMD8Q9NX08 183 aa15.88■□□□□ 0.13
SF3A2-204ENST00000589118 A0A087WV48 116 aa15.87■□□□□ 0.13
SF3A2-204ENST00000589118 H0Y8X5 98 aa15.87■□□□□ 0.13
SF3A2-204ENST00000589118 FLRT2O43155 660 aa15.87■□□□□ 0.13
SF3A2-204ENST00000589118 SYNCRIPO60506 623 aaKnown RBP15.87■□□□□ 0.13
SF3A2-204ENST00000589118 PENKP01210 267 aaPredicted RBP15.87■□□□□ 0.13
SF3A2-204ENST00000589118 C4BPAP04003 597 aaKnown RBP15.87■□□□□ 0.13
SF3A2-204ENST00000589118 EPHX1P07099 455 aa15.87■□□□□ 0.13
SF3A2-204ENST00000589118 PLA2G4AP47712 749 aa15.87■□□□□ 0.13
SF3A2-204ENST00000589118 ASIC1P78348 528 aa15.87■□□□□ 0.13
SF3A2-204ENST00000589118 NCOA4Q13772 614 aa15.87■□□□□ 0.13
SF3A2-204ENST00000589118 ENPP2Q13822 863 aa15.87■□□□□ 0.13
SF3A2-204ENST00000589118 FAM26FQ5R3K3 315 aa15.87■□□□□ 0.13
SF3A2-204ENST00000589118 CLEC20AQ6ZU45 233 aa15.87■□□□□ 0.13
SF3A2-204ENST00000589118 PIWIL1Q96J94 861 aaKnown RBP15.87■□□□□ 0.13
SF3A2-204ENST00000589118 CDC6Q99741 560 aa15.87■□□□□ 0.13
SF3A2-204ENST00000589118 NUP58Q9BVL2 599 aa15.87■□□□□ 0.13
SF3A2-204ENST00000589118 CIPCQ9C0C6 399 aa15.87■□□□□ 0.13
SF3A2-204ENST00000589118 BLZF1Q9H2G9 400 aa15.87■□□□□ 0.13
SF3A2-204ENST00000589118 FBXO44Q9H4M3 255 aa15.87■□□□□ 0.13
SF3A2-204ENST00000589118 ELOVL2Q9NXB9 296 aa15.87■□□□□ 0.13
SF3A2-204ENST00000589118 DKK4Q9UBT3 224 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms