RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 SLC35B2Q8TB61 432 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 SLC7A14Q8TBB6 771 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.54□□□□□ -0.4
CCBE1-203ENST00000589116 CCDC114Q96M63 670 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 HINFPQ9BQA5 517 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 HERC2P3Q9BVR0 1158 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 CALCOCO1Q9P1Z2 691 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 SCML2Q9UQR0 700 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 KIAA1671Q9BY89 1806 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 FAM92AA1XBS5 289 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 RTN3O95197 1032 aaPredicted RBP12.54□□□□□ -0.4
CCBE1-203ENST00000589116 ACRP10323 421 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 ZFXP17010 805 aaPredicted RBP12.54□□□□□ -0.4
CCBE1-203ENST00000589116 ECHS1P30084 290 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 L1CAMP32004 1257 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 TNNT3P45378 269 aaPredicted RBP12.54□□□□□ -0.4
CCBE1-203ENST00000589116 ATXN1P54253 815 aaKnown RBP12.54□□□□□ -0.4
CCBE1-203ENST00000589116 YWHAGP61981 247 aaKnown RBP eCLIP12.54□□□□□ -0.4
CCBE1-203ENST00000589116 RPL10AP62906 217 aaKnown RBP12.54□□□□□ -0.4
CCBE1-203ENST00000589116 PITX1P78337 314 aaPredicted RBP12.54□□□□□ -0.4
CCBE1-203ENST00000589116 FPGSQ05932 587 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 CASP8Q14790 479 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 OASLQ15646 514 aaKnown RBP12.54□□□□□ -0.4
CCBE1-203ENST00000589116 ANKRD20A8PQ5CZ79 823 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 SLC9A4Q6AI14 798 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 KIAA1841Q6NSI8 718 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 ZNF365Q70YC5 407 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 SND1Q7KZF4 910 aaKnown RBP eCLIP12.54□□□□□ -0.4
CCBE1-203ENST00000589116 TAS1R1Q7RTX1 841 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 GPR65Q8IYL9 337 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 CCDC185Q8N715 623 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 CCDC89Q8N998 374 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 COLGALT1Q8NBJ5 622 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 SCAMP5Q8TAC9 235 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 ACTL9Q8TC94 416 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 RIN2Q8WYP3 895 aaPredicted RBP12.54□□□□□ -0.4
CCBE1-203ENST00000589116 SPATA17Q96L03 361 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 PGLYRP2Q96PD5 576 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 YME1L1Q96TA2 773 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 VN1R3Q9BXE9 311 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 DPH5Q9H2P9 285 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 DHX35Q9H5Z1 703 aaKnown RBP12.54□□□□□ -0.4
CCBE1-203ENST00000589116 FAM204AQ9H8W3 233 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 VIPAS39Q9H9C1 493 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 WDR6Q9NNW5 1121 aaKnown RBP12.54□□□□□ -0.4
CCBE1-203ENST00000589116 AAASQ9NRG9 546 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 PIGVQ9NUD9 493 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 GPATCH2LQ9NWQ4 482 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 SPG21Q9NZD8 308 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 IL37Q9NZH6 218 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 HSFX1Q9UBD0 423 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 DNPEPQ9ULA0 475 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 CDY1Q9Y6F8 540 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 MRPL42Q9Y6G3 142 aaKnown RBP12.54□□□□□ -0.4
CCBE1-203ENST00000589116 PRUNE2Q8WUY3 3088 aa12.54□□□□□ -0.4
CCBE1-203ENST00000589116 APOL1O14791 398 aa12.53□□□□□ -0.4
CCBE1-203ENST00000589116 FGBP02675 491 aa12.53□□□□□ -0.4
CCBE1-203ENST00000589116 HAPLN1P10915 354 aaPredicted RBP12.53□□□□□ -0.4
CCBE1-203ENST00000589116 IL4RP24394 825 aa12.53□□□□□ -0.4
CCBE1-203ENST00000589116 ARL4AP40617 200 aa12.53□□□□□ -0.4
CCBE1-203ENST00000589116 GLUD2P49448 558 aa12.53□□□□□ -0.4
CCBE1-203ENST00000589116 ZNF135P52742 658 aaPredicted RBP12.53□□□□□ -0.4
CCBE1-203ENST00000589116 ARPP19P56211 112 aa12.53□□□□□ -0.4
CCBE1-203ENST00000589116 DYNLT1P63172 113 aa12.53□□□□□ -0.4
CCBE1-203ENST00000589116 OTUD4Q01804 1114 aaKnown RBP12.53□□□□□ -0.4
CCBE1-203ENST00000589116 DSG1Q02413 1049 aa12.53□□□□□ -0.4
CCBE1-203ENST00000589116 MMRN1Q13201 1228 aa12.53□□□□□ -0.4
CCBE1-203ENST00000589116 NME3Q13232 169 aa12.53□□□□□ -0.4
CCBE1-203ENST00000589116 CA9Q16790 459 aa12.53□□□□□ -0.4
CCBE1-203ENST00000589116 ARL13BQ3SXY8 428 aa12.53□□□□□ -0.4
CCBE1-203ENST00000589116 EFHC2Q5JST6 749 aa12.53□□□□□ -0.4
CCBE1-203ENST00000589116 BTBD8Q5XKL5 378 aa12.53□□□□□ -0.4
CCBE1-203ENST00000589116 FAM117BQ6P1L5 589 aa12.53□□□□□ -0.4
CCBE1-203ENST00000589116 PSRC1Q6PGN9 363 aaPredicted RBP12.53□□□□□ -0.4
CCBE1-203ENST00000589116 PRSS55Q6UWB4 352 aaPredicted RBP12.53□□□□□ -0.4
CCBE1-203ENST00000589116 RSPO2Q6UXX9 243 aaPredicted RBP12.53□□□□□ -0.4
CCBE1-203ENST00000589116 RNF19BQ6ZMZ0 732 aa12.53□□□□□ -0.4
CCBE1-203ENST00000589116 DENND5BQ6ZUT9 1274 aa12.53□□□□□ -0.4
CCBE1-203ENST00000589116 OTOP2Q7RTS6 562 aa12.53□□□□□ -0.4
CCBE1-203ENST00000589116 MON1AQ86VX9 555 aa12.53□□□□□ -0.4
CCBE1-203ENST00000589116 MREGQ8N565 214 aa12.53□□□□□ -0.4
CCBE1-203ENST00000589116 ATAD1Q8NBU5 361 aa12.53□□□□□ -0.4
CCBE1-203ENST00000589116 DQX1Q8TE96 717 aaKnown RBP12.53□□□□□ -0.4
CCBE1-203ENST00000589116 KCTD15Q96SI1 283 aaPredicted RBP12.53□□□□□ -0.4
CCBE1-203ENST00000589116 ACBD3Q9H3P7 528 aa12.53□□□□□ -0.4
CCBE1-203ENST00000589116 SMOC2Q9H3U7 446 aa12.53□□□□□ -0.4
CCBE1-203ENST00000589116 DDIT4Q9NX09 232 aa12.53□□□□□ -0.4
CCBE1-203ENST00000589116 WHRNQ9P202 907 aa12.53□□□□□ -0.4
CCBE1-203ENST00000589116 ZNF148Q9UQR1 794 aa12.53□□□□□ -0.4
CCBE1-203ENST00000589116 NEU2Q9Y3R4 380 aa12.53□□□□□ -0.4
CCBE1-203ENST00000589116 GREB1Q4ZG55 1949 aa12.52□□□□□ -0.4
CCBE1-203ENST00000589116 NDC80O14777 642 aa12.52□□□□□ -0.4
CCBE1-203ENST00000589116 MCF2LO15068 1137 aa12.52□□□□□ -0.4
CCBE1-203ENST00000589116 SASH3O75995 380 aa12.52□□□□□ -0.4
CCBE1-203ENST00000589116 IGLV3-25P01717 112 aa12.52□□□□□ -0.4
CCBE1-203ENST00000589116 RPL21P46778 160 aaKnown RBP12.52□□□□□ -0.4
CCBE1-203ENST00000589116 CXCR3P49682 368 aa12.52□□□□□ -0.4
CCBE1-203ENST00000589116 PSEN1P49768 467 aa12.52□□□□□ -0.4
CCBE1-203ENST00000589116 HTRA4P83105 476 aaPredicted RBP12.52□□□□□ -0.4
CCBE1-203ENST00000589116 ROR1Q01973 937 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms